RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 ASIC4Q96FT7 647 aa9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 TRIT1Q9H3H1 467 aaKnown RBP9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 CSNK1G1Q9HCP0 422 aa9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 PLSCR3Q9NRY6 295 aa9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 MALT1Q9UDY8 824 aa9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 GNPTGQ9UJJ9 305 aa9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 RAI2Q9Y5P3 530 aa9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 ZNF646O15015 1829 aaPredicted RBP9.77□□□□□ -0.85
CDC42SE1-202ENST00000439374 PABPN1LA6NDY0 278 aaKnown RBP9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 VPS26AO75436 327 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 CKMP06732 381 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 ACLYP53396 1101 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 SNRPD2P62316 118 aaKnown RBP9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 SELENBP1Q13228 472 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 ARHGEF7Q14155 803 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 GPSM1Q86YR5 675 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 RAB2BQ8WUD1 216 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 ATL1Q8WXF7 558 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 DACT3Q96B18 629 aaPredicted RBP9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 TSGA13Q96PP4 275 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 DEPDC7Q96QD5 511 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 BARD1Q99728 777 aaKnown RBP9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 PRDM16Q9HAZ2 1276 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 KRT87PA6NCN2 255 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 SLC22A3O75751 556 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 RASAL1O95294 804 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 BMP2P12643 396 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 RAPSNQ13702 412 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 PHKG1Q16816 387 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 ADPRMQ3LIE5 342 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 DESI1Q6ICB0 168 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 FAM45BPQ6NSW5 357 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 PSAPL1Q6NUJ1 521 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 KDELC1Q6UW63 502 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 CCDC117Q8IWD4 279 aaPredicted RBP9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 PIANPQ8IYJ0 282 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 ANKFN1Q8N957 763 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 FAM45AQ8TCE6 357 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 MYLIPQ8WY64 445 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 Q96MT0 163 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 TAS2R16Q9NYV7 291 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 EHD3Q9NZN3 535 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 PCDHB8Q9UN66 801 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 SNX6Q9UNH7 406 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 TBL1XO60907 577 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 ECI2O75521 394 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 RPP40O75818 363 aaKnown RBP9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 COL6A1P12109 1028 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 CD36P16671 472 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 SLC11A1P49279 550 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 POLR2JP52435 117 aaKnown RBP9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 ZXDBP98169 803 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 DAG1Q14118 895 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 NPTX1Q15818 432 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 MSANTD2Q6P1R3 559 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 FUT10Q6P4F1 479 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 ZNF549Q6P9A3 640 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 LRRC8DQ7L1W4 858 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 P2RY8Q86VZ1 359 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 STAG3L4Q8TBR4 150 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 CD99L2Q8TCZ2 262 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 OSCP1Q8WVF1 389 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 PROX1Q92786 737 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 PGAP3Q96FM1 320 aaPredicted RBP9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 TSSK3Q96PN8 268 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 COQ7Q99807 217 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 TDRD1Q9BXT4 1180 aaKnown RBP9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 GSTO2Q9H4Y5 243 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 ACTR8Q9H981 624 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 TREX1Q9NSU2 369 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 RIC8BQ9NVN3 520 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 PSME4Q14997 1843 aa9.76□□□□□ -0.85
CDC42SE1-202ENST00000439374 ZNF638Q14966 1978 aaKnown RBP9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 ANK1P16157 1881 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 FXYD1O00168 92 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 SULT1C4O75897 302 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 MT-ND2P03891 347 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 SLC10A3P09131 477 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 ATXN8OSP0DMR3 200 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 G6PDP11413 515 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 IMPDH1P20839 514 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 GPX3P22352 226 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 DCKP27707 260 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 HSPA7P48741 367 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 HLCSP50747 726 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 SMAD3P84022 425 aaKnown RBP9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 CD83Q01151 205 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 ATP6AP1Q15904 470 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 CPSF6Q16630 551 aaKnown RBP eCLIP9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 ZNF678Q5SXM1 525 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 C6orf141Q5SZD1 244 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 HIPK1Q86Z02 1210 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 HS6ST3Q8IZP7 471 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 KRTCAP2Q8N6L1 136 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 PCSK9Q8NBP7 692 aaKnown RBP9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 TRUB1Q8WWH5 349 aaKnown RBP9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 MYRFLQ96LU7 910 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 TSEN34Q9BSV6 310 aaKnown RBP9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 TUBB1Q9H4B7 451 aa9.75□□□□□ -0.85
CDC42SE1-202ENST00000439374 ABCB9Q9NP78 766 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms