RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 POLR2EP19388 210 aaKnown RBP13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 PAGE3Q5JUK9 113 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 SBSNQ6UWP8 590 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 MINDY1Q8N5J2 469 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 SMYD1Q8NB12 490 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 CHST14Q8NCH0 376 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 OSCP1Q8WVF1 389 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 LZICQ8WZA0 190 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 FGF13Q92913 245 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 ZFYVE19Q96K21 471 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 NUSAP1Q9BXS6 441 aaKnown RBP13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 LMAN2LQ9H0V9 348 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 NSUN3Q9H649 340 aaKnown RBP13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 MSRAQ9UJ68 235 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 ERVW-1Q9UQF0 538 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 MYRFQ9Y2G1 1151 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 DHRS7Q9Y394 339 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 REV3LO60673 3130 aa13.62□□□□□ -0.23
PTCHD3-201ENST00000438700 UGT2B4P06133 528 aa13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 CAPN1P07384 714 aa13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 FSHRP23945 695 aa13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 HSPA13P48723 471 aa13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 NFATC2Q13469 925 aa13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 RCAN2Q14206 197 aa13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 GET4Q7L5D6 327 aaPredicted RBP13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 KIAA0907Q7Z7F0 614 aaPredicted RBP13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 METTL6Q8TCB7 284 aa13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 GIPC3Q8TF64 312 aa13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 NUDT8Q8WV74 236 aa13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 RMND5BQ96G75 393 aaPredicted RBP13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 ASB16Q96NS5 453 aa13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 ABCG8Q9H221 673 aa13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 SUV39H2Q9H5I1 410 aa13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 SLC28A3Q9HAS3 691 aa13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 FAIMQ9NVQ4 179 aa13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 GID8Q9NWU2 228 aa13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 PADI4Q9UM07 663 aa13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 A0A1W2PP18 115 aa13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 FAM149AA5PLN7 773 aa13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 NPIPB15A6NHN6 443 aaPredicted RBP13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 SYNCRIPO60506 623 aaKnown RBP13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 SLC22A3O75751 556 aa13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 POP4O95707 220 aaKnown RBP13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 MTHFD1P11586 935 aaKnown RBP13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 CD9P21926 228 aa13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 ZFP36L2P47974 494 aaKnown RBP13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 CDKN3Q16667 212 aa13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 PLA2G4EQ3MJ16 856 aa13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 ATP6AP1LQ52LC2 224 aa13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 C6orf136Q5SQH8 315 aa13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 IL27RAQ6UWB1 636 aa13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 GOLGA7Q7Z5G4 137 aa13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 SPATA19Q7Z5L4 167 aa13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 TSPAN33Q86UF1 283 aa13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 C12orf40Q86WS4 652 aa13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 C12orf43Q96C57 262 aaKnown RBP13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 TMEM74Q96NL1 305 aa13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 ZNF382Q96SR6 550 aa13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 HAUS8Q9BT25 410 aa13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 EFHD1Q9BUP0 239 aa13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 PIF1Q9H611 641 aa13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 IL26Q9NPH9 171 aa13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 INIPQ9NRY2 104 aa13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 NUDT4Q9NZJ9 180 aa13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 THEGQ9P2T0 379 aa13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 ZFC3H1O60293 1989 aaKnown RBP13.61□□□□□ -0.23
PTCHD3-201ENST00000438700 ZNF106Q9H2Y7 1883 aaKnown RBP13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 CCDC154A6NI56 674 aa13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 FFAR2O15552 330 aa13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 SLC25A14O95258 325 aaPredicted RBP13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 ATE1O95260 518 aa13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 PAPLNO95428 1278 aa13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 ADH1CP00326 375 aa13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 ZNF7P17097 686 aaPredicted RBP13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 CD247P20963 164 aa13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 IL12AP29459 219 aa13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 OXTRP30559 389 aa13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 GDF5P43026 501 aa13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 HSPA7P48741 367 aa13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 DGKGP49619 791 aa13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 ERVK-8P63133 956 aa13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 PRMT9Q6P2P2 845 aa13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 Q6ZNX1 250 aa13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 Q6ZSR9 355 aa13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 OR4F6Q8NGB9 312 aa13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 OR2A12Q8NGT7 310 aa13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 BPIFB1Q8TDL5 484 aa13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 SMARCD2Q92925 531 aa13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 ISOC1Q96CN7 298 aa13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 ECHDC3Q96DC8 303 aa13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 MRGPRX3Q96LB0 322 aa13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 CPEB1Q9BZB8 566 aaKnown RBP13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 SH3PXD2BA1X283 911 aa13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 SAC3D1A6NKF1 404 aa13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 TTC34A8MYJ7 566 aa13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 NCK1P16333 377 aa13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 PIK3CGP48736 1102 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms