RNA–Protein interactions for RNA: ENST00000438497.5

SCRN1-208, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-208ENST00000438497 DPYSL2Q16555 572 aa8.35□□□□□ -1.07
SCRN1-208ENST00000438497 IFI16Q16666 785 aaKnown RBP8.35□□□□□ -1.07
SCRN1-208ENST00000438497 ATP13A5Q4VNC0 1218 aa8.35□□□□□ -1.07
SCRN1-208ENST00000438497 CCDC122Q5T0U0 273 aa8.35□□□□□ -1.07
SCRN1-208ENST00000438497 PLEKHA7Q6IQ23 1121 aa8.35□□□□□ -1.07
SCRN1-208ENST00000438497 TIGD7Q6NT04 549 aaPredicted RBP8.35□□□□□ -1.07
SCRN1-208ENST00000438497 RHBDD2Q6NTF9 364 aa8.35□□□□□ -1.07
SCRN1-208ENST00000438497 RASGEF1AQ8N9B8 481 aa8.35□□□□□ -1.07
SCRN1-208ENST00000438497 ADAMTS18Q8TE60 1221 aa8.35□□□□□ -1.07
SCRN1-208ENST00000438497 MAML1Q92585 1016 aa8.35□□□□□ -1.07
SCRN1-208ENST00000438497 HSPH1Q92598 858 aa8.35□□□□□ -1.07
SCRN1-208ENST00000438497 C12orf66Q96MD2 445 aa8.35□□□□□ -1.07
SCRN1-208ENST00000438497 VPS35Q96QK1 796 aa8.35□□□□□ -1.07
SCRN1-208ENST00000438497 NDC1Q9BTX1 674 aa8.35□□□□□ -1.07
SCRN1-208ENST00000438497 KLHL25Q9H0H3 589 aa8.35□□□□□ -1.07
SCRN1-208ENST00000438497 SRMSQ9H3Y6 488 aa8.35□□□□□ -1.07
SCRN1-208ENST00000438497 KIR3DX1Q9H7L2 352 aa8.35□□□□□ -1.07
SCRN1-208ENST00000438497 MAGEE1Q9HCI5 957 aa8.35□□□□□ -1.07
SCRN1-208ENST00000438497 BPIFA1Q9NP55 256 aa8.35□□□□□ -1.07
SCRN1-208ENST00000438497 SEMA3GQ9NS98 782 aa8.35□□□□□ -1.07
SCRN1-208ENST00000438497 NFKBIL1Q9UBC1 381 aaPredicted RBP8.35□□□□□ -1.07
SCRN1-208ENST00000438497 DHCR7Q9UBM7 475 aaKnown RBP8.35□□□□□ -1.07
SCRN1-208ENST00000438497 FBXL4Q9UKA2 621 aa8.35□□□□□ -1.07
SCRN1-208ENST00000438497 ACSL5Q9ULC5 683 aa8.35□□□□□ -1.07
SCRN1-208ENST00000438497 PYCARDQ9ULZ3 195 aa8.35□□□□□ -1.07
SCRN1-208ENST00000438497 PCDHGB6Q9Y5F9 930 aa8.35□□□□□ -1.07
SCRN1-208ENST00000438497 OR2AG2A6NM03 316 aa8.34□□□□□ -1.07
SCRN1-208ENST00000438497 ATMINO43313 823 aaPredicted RBP8.34□□□□□ -1.07
SCRN1-208ENST00000438497 CRYABP02511 175 aaKnown RBP8.34□□□□□ -1.07
SCRN1-208ENST00000438497 POLBP06746 335 aa8.34□□□□□ -1.07
SCRN1-208ENST00000438497 RARAP10276 462 aa8.34□□□□□ -1.07
SCRN1-208ENST00000438497 PVRP15151 417 aa8.34□□□□□ -1.07
SCRN1-208ENST00000438497 ALAS2P22557 587 aa8.34□□□□□ -1.07
SCRN1-208ENST00000438497 IL1R2P27930 398 aa8.34□□□□□ -1.07
SCRN1-208ENST00000438497 NDUFS1P28331 727 aa8.34□□□□□ -1.07
SCRN1-208ENST00000438497 CTSCP53634 463 aa8.34□□□□□ -1.07
SCRN1-208ENST00000438497 CSNK1G2P78368 415 aa8.34□□□□□ -1.07
SCRN1-208ENST00000438497 IRX1P78414 480 aaPredicted RBP8.34□□□□□ -1.07
SCRN1-208ENST00000438497 ARG2P78540 354 aa8.34□□□□□ -1.07
SCRN1-208ENST00000438497 SRSF11Q05519 484 aaKnown RBP8.34□□□□□ -1.07
SCRN1-208ENST00000438497 MFAP5Q13361 173 aa8.34□□□□□ -1.07
SCRN1-208ENST00000438497 CDSNQ15517 529 aa8.34□□□□□ -1.07
SCRN1-208ENST00000438497 NKAIN1Q4KMZ8 207 aa8.34□□□□□ -1.07
SCRN1-208ENST00000438497 FAAH2Q6GMR7 532 aa8.34□□□□□ -1.07
SCRN1-208ENST00000438497 MEX3BQ6ZN04 569 aaKnown RBP8.34□□□□□ -1.07
SCRN1-208ENST00000438497 CDHR3Q6ZTQ4 885 aa8.34□□□□□ -1.07
SCRN1-208ENST00000438497 HOOK3Q86VS8 718 aa8.34□□□□□ -1.07
SCRN1-208ENST00000438497 OTUD6BQ8N6M0 293 aa8.34□□□□□ -1.07
SCRN1-208ENST00000438497 DNAJB8Q8NHS0 232 aa8.34□□□□□ -1.07
SCRN1-208ENST00000438497 PROKR1Q8TCW9 393 aa8.34□□□□□ -1.07
SCRN1-208ENST00000438497 LCN9Q8WX39 176 aa8.34□□□□□ -1.07
SCRN1-208ENST00000438497 ITFG2Q969R8 447 aa8.34□□□□□ -1.07
SCRN1-208ENST00000438497 VPS50Q96JG6 964 aa8.34□□□□□ -1.07
SCRN1-208ENST00000438497 TSGA13Q96PP4 275 aa8.34□□□□□ -1.07
SCRN1-208ENST00000438497 TRIM56Q9BRZ2 755 aaKnown RBP8.34□□□□□ -1.07
SCRN1-208ENST00000438497 TRIM7Q9C029 511 aa8.34□□□□□ -1.07
SCRN1-208ENST00000438497 ENKD1Q9H0I2 346 aa8.34□□□□□ -1.07
SCRN1-208ENST00000438497 CLSTN2Q9H4D0 955 aa8.34□□□□□ -1.07
SCRN1-208ENST00000438497 GPAMQ9HCL2 828 aa8.34□□□□□ -1.07
SCRN1-208ENST00000438497 SAMSN1Q9NSI8 373 aaKnown RBP8.34□□□□□ -1.07
SCRN1-208ENST00000438497 TXLNGQ9NUQ3 528 aa8.34□□□□□ -1.07
SCRN1-208ENST00000438497 TAS2R14Q9NYV8 317 aa8.34□□□□□ -1.07
SCRN1-208ENST00000438497 PLA2G3Q9NZ20 509 aa8.34□□□□□ -1.07
SCRN1-208ENST00000438497 CDC23Q9UJX2 597 aa8.34□□□□□ -1.07
SCRN1-208ENST00000438497 PRRC2AP48634 2157 aaKnown RBP8.34□□□□□ -1.08
SCRN1-208ENST00000438497 MAP1AP78559 2803 aaPredicted RBP8.33□□□□□ -1.08
SCRN1-208ENST00000438497 TRAV17A0A0B4J275 112 aa8.33□□□□□ -1.08
SCRN1-208ENST00000438497 DYTNA2CJ06 578 aa8.33□□□□□ -1.08
SCRN1-208ENST00000438497 MGAT4DA6NG13 374 aa8.33□□□□□ -1.08
SCRN1-208ENST00000438497 BTN3A3O00478 584 aa8.33□□□□□ -1.08
SCRN1-208ENST00000438497 SOCS6O14544 535 aa8.33□□□□□ -1.08
SCRN1-208ENST00000438497 EPHB6O15197 1021 aa8.33□□□□□ -1.08
SCRN1-208ENST00000438497 FANCGO15287 622 aa8.33□□□□□ -1.08
SCRN1-208ENST00000438497 UGT1A9O60656 530 aa8.33□□□□□ -1.08
SCRN1-208ENST00000438497 HLA-DQB2P05538 268 aa8.33□□□□□ -1.08
SCRN1-208ENST00000438497 MMP2P08253 660 aa8.33□□□□□ -1.08
SCRN1-208ENST00000438497 UGT1A6P19224 532 aa8.33□□□□□ -1.08
SCRN1-208ENST00000438497 UGT1A1P22309 533 aa8.33□□□□□ -1.08
SCRN1-208ENST00000438497 UGT1A4P22310 534 aa8.33□□□□□ -1.08
SCRN1-208ENST00000438497 MST1P26927 711 aa8.33□□□□□ -1.08
SCRN1-208ENST00000438497 PBLDP30039 288 aaPredicted RBP8.33□□□□□ -1.08
SCRN1-208ENST00000438497 PCK1P35558 622 aa8.33□□□□□ -1.08
SCRN1-208ENST00000438497 PCM1Q15154 2024 aa8.33□□□□□ -1.08
SCRN1-208ENST00000438497 C3AR1Q16581 482 aa8.33□□□□□ -1.08
SCRN1-208ENST00000438497 TCP11X2Q5H9J9 407 aa8.33□□□□□ -1.08
SCRN1-208ENST00000438497 FNBP1LQ5T0N5 605 aa8.33□□□□□ -1.08
SCRN1-208ENST00000438497 ZFYVE27Q5T4F4 411 aa8.33□□□□□ -1.08
SCRN1-208ENST00000438497 NUP210LQ5VU65 1888 aa8.33□□□□□ -1.08
SCRN1-208ENST00000438497 CCDC70Q6NSX1 233 aa8.33□□□□□ -1.08
SCRN1-208ENST00000438497 PPP1R2P3Q6NXS1 205 aa8.33□□□□□ -1.08
SCRN1-208ENST00000438497 KIRREL2Q6UWL6 708 aa8.33□□□□□ -1.08
SCRN1-208ENST00000438497 TGIF2LYQ8IUE0 185 aa8.33□□□□□ -1.08
SCRN1-208ENST00000438497 C17orf53Q8N3J3 647 aaPredicted RBP8.33□□□□□ -1.08
SCRN1-208ENST00000438497 ZNF655Q8N720 491 aaPredicted RBP8.33□□□□□ -1.08
SCRN1-208ENST00000438497 ACVR1CQ8NER5 493 aa8.33□□□□□ -1.08
SCRN1-208ENST00000438497 LRRN4Q8WUT4 740 aa8.33□□□□□ -1.08
SCRN1-208ENST00000438497 ZNF592Q92610 1267 aa8.33□□□□□ -1.08
SCRN1-208ENST00000438497 HAS2Q92819 552 aa8.33□□□□□ -1.08
SCRN1-208ENST00000438497 FERD3LQ96RJ6 166 aa8.33□□□□□ -1.08
SCRN1-208ENST00000438497 PAIP2Q9BPZ3 127 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms