RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 TMEM245Q9H330 911 aa25.14■■□□□ 1.62
CPNE1-216ENST00000437340 LMCD1Q9NZU5 365 aa25.14■■□□□ 1.62
CPNE1-216ENST00000437340 LRCH1Q9Y2L9 728 aa25.14■■□□□ 1.62
CPNE1-216ENST00000437340 CCL27Q9Y4X3 112 aa25.14■■□□□ 1.62
CPNE1-216ENST00000437340 FAM234BA2RU67 622 aa25.13■■□□□ 1.61
CPNE1-216ENST00000437340 PRORSD1PA6NEY8 169 aa25.13■■□□□ 1.61
CPNE1-216ENST00000437340 RGS14O43566 566 aa25.13■■□□□ 1.61
CPNE1-216ENST00000437340 MSX2P35548 267 aaPredicted RBP25.13■■□□□ 1.61
CPNE1-216ENST00000437340 ZFP36L2P47974 494 aaKnown RBP25.13■■□□□ 1.61
CPNE1-216ENST00000437340 ZNF765Q7L2R6 523 aa25.13■■□□□ 1.61
CPNE1-216ENST00000437340 TMEM126BQ8IUX1 230 aa25.13■■□□□ 1.61
CPNE1-216ENST00000437340 TERB1Q8NA31 727 aa25.13■■□□□ 1.61
CPNE1-216ENST00000437340 C1orf50Q9BV19 199 aa25.13■■□□□ 1.61
CPNE1-216ENST00000437340 COLQQ9Y215 455 aaPredicted RBP25.13■■□□□ 1.61
CPNE1-216ENST00000437340 DENND4AQ7Z401 1863 aa25.13■■□□□ 1.61
CPNE1-216ENST00000437340 MUC22E2RYF6 1773 aaPredicted RBP25.13■■□□□ 1.61
CPNE1-216ENST00000437340 GRXCR2A6NFK2 248 aa25.13■■□□□ 1.61
CPNE1-216ENST00000437340 ULK1O75385 1050 aa25.13■■□□□ 1.61
CPNE1-216ENST00000437340 EEDO75530 441 aaKnown RBP25.13■■□□□ 1.61
CPNE1-216ENST00000437340 CLDN9O95484 217 aa25.13■■□□□ 1.61
CPNE1-216ENST00000437340 SLC6A12P48065 614 aa25.13■■□□□ 1.61
CPNE1-216ENST00000437340 SLC7A2P52569 658 aa25.13■■□□□ 1.61
CPNE1-216ENST00000437340 UFM1P61960 85 aa25.13■■□□□ 1.61
CPNE1-216ENST00000437340 DLX2Q07687 328 aaPredicted RBP25.13■■□□□ 1.61
CPNE1-216ENST00000437340 MAD2L1Q13257 205 aaPredicted RBP25.13■■□□□ 1.61
CPNE1-216ENST00000437340 GGTA1PQ4G0N0 100 aa25.13■■□□□ 1.61
CPNE1-216ENST00000437340 FBXL19Q6PCT2 694 aa25.13■■□□□ 1.61
CPNE1-216ENST00000437340 TRIM46Q7Z4K8 759 aa25.13■■□□□ 1.61
CPNE1-216ENST00000437340 CPA6Q8N4T0 437 aa25.13■■□□□ 1.61
CPNE1-216ENST00000437340 UCMAQ8WVF2 138 aa25.13■■□□□ 1.61
CPNE1-216ENST00000437340 EPHX3Q9H6B9 360 aa25.13■■□□□ 1.61
CPNE1-216ENST00000437340 ZFP14Q9HCL3 533 aa25.13■■□□□ 1.61
CPNE1-216ENST00000437340 MTCH2Q9Y6C9 303 aa25.13■■□□□ 1.61
CPNE1-216ENST00000437340 LOC730098B7Z3J9 87 aa25.12■■□□□ 1.61
CPNE1-216ENST00000437340 AREL1O15033 823 aa25.12■■□□□ 1.61
CPNE1-216ENST00000437340 SPINT1O43278 529 aa25.12■■□□□ 1.61
CPNE1-216ENST00000437340 HLA-EP13747 358 aa25.12■■□□□ 1.61
CPNE1-216ENST00000437340 TCN1P20061 433 aaPredicted RBP25.12■■□□□ 1.61
CPNE1-216ENST00000437340 PRLHRP49683 370 aa25.12■■□□□ 1.61
CPNE1-216ENST00000437340 POLR2JP52435 117 aaKnown RBP25.12■■□□□ 1.61
CPNE1-216ENST00000437340 FCHO2Q0JRZ9 810 aa25.12■■□□□ 1.61
CPNE1-216ENST00000437340 ZNF234Q14588 700 aa25.12■■□□□ 1.61
CPNE1-216ENST00000437340 AP5B1Q2VPB7 878 aa25.12■■□□□ 1.61
CPNE1-216ENST00000437340 KBTBD2Q8IY47 623 aa25.12■■□□□ 1.61
CPNE1-216ENST00000437340 PQLC1Q8N2U9 271 aa25.12■■□□□ 1.61
CPNE1-216ENST00000437340 PROKR1Q8TCW9 393 aa25.12■■□□□ 1.61
CPNE1-216ENST00000437340 ARRDC3Q96B67 414 aa25.12■■□□□ 1.61
CPNE1-216ENST00000437340 LRRC58Q96CX6 371 aa25.12■■□□□ 1.61
CPNE1-216ENST00000437340 TEX37Q96LM6 180 aa25.12■■□□□ 1.61
CPNE1-216ENST00000437340 FAM129BQ96TA1 746 aa25.12■■□□□ 1.61
CPNE1-216ENST00000437340 LEF1Q9UJU2 399 aaPredicted RBP25.12■■□□□ 1.61
CPNE1-216ENST00000437340 ITM2BQ9Y287 266 aa25.12■■□□□ 1.61
CPNE1-216ENST00000437340 RNF11Q9Y3C5 154 aa25.12■■□□□ 1.61
CPNE1-216ENST00000437340 KIF26AQ9ULI4 1882 aaPredicted RBP25.12■■□□□ 1.61
CPNE1-216ENST00000437340 FXYD1O00168 92 aa25.11■■□□□ 1.61
CPNE1-216ENST00000437340 ATG13O75143 517 aa25.11■■□□□ 1.61
CPNE1-216ENST00000437340 GSTM1P09488 218 aa25.11■■□□□ 1.61
CPNE1-216ENST00000437340 MAPK9P45984 424 aa25.11■■□□□ 1.61
CPNE1-216ENST00000437340 MRPS22P82650 360 aaKnown RBP25.11■■□□□ 1.61
CPNE1-216ENST00000437340 CREB5Q02930 508 aa25.11■■□□□ 1.61
CPNE1-216ENST00000437340 GSTM4Q03013 218 aa25.11■■□□□ 1.61
CPNE1-216ENST00000437340 PRKG2Q13237 762 aa25.11■■□□□ 1.61
CPNE1-216ENST00000437340 ADGRE1Q14246 886 aa25.11■■□□□ 1.61
CPNE1-216ENST00000437340 MAP7D1Q3KQU3 841 aa25.11■■□□□ 1.61
CPNE1-216ENST00000437340 TANGO2Q6ICL3 276 aa25.11■■□□□ 1.61
CPNE1-216ENST00000437340 RASGEF1AQ8N9B8 481 aa25.11■■□□□ 1.61
CPNE1-216ENST00000437340 FAM156AQ8NDB6 213 aa25.11■■□□□ 1.61
CPNE1-216ENST00000437340 GLMNQ92990 594 aa25.11■■□□□ 1.61
CPNE1-216ENST00000437340 USP7Q93009 1102 aa25.11■■□□□ 1.61
CPNE1-216ENST00000437340 CDH7Q9ULB5 785 aa25.11■■□□□ 1.61
CPNE1-216ENST00000437340 A0A1W2PPC1 479 aa25.1■■□□□ 1.61
CPNE1-216ENST00000437340 CCDC154A6NI56 674 aa25.1■■□□□ 1.61
CPNE1-216ENST00000437340 OR2AG2A6NM03 316 aa25.1■■□□□ 1.61
CPNE1-216ENST00000437340 IFRD1O00458 451 aaPredicted RBP25.1■■□□□ 1.61
CPNE1-216ENST00000437340 PEX1O43933 1283 aa25.1■■□□□ 1.61
CPNE1-216ENST00000437340 NPPAP01160 153 aa25.1■■□□□ 1.61
CPNE1-216ENST00000437340 TMEM115Q12893 351 aaPredicted RBP25.1■■□□□ 1.61
CPNE1-216ENST00000437340 VITQ6UXI7 678 aa25.1■■□□□ 1.61
CPNE1-216ENST00000437340 IZUMO2Q6UXV1 221 aa25.1■■□□□ 1.61
CPNE1-216ENST00000437340 GALNT13Q8IUC8 556 aa25.1■■□□□ 1.61
CPNE1-216ENST00000437340 MAGEB10Q96LZ2 347 aaPredicted RBP25.1■■□□□ 1.61
CPNE1-216ENST00000437340 ECSITQ9BQ95 431 aa25.1■■□□□ 1.61
CPNE1-216ENST00000437340 WRAP53Q9BUR4 548 aaKnown RBP25.1■■□□□ 1.61
CPNE1-216ENST00000437340 S1PR5Q9H228 398 aa25.1■■□□□ 1.61
CPNE1-216ENST00000437340 KLQ9UEF7 1012 aa25.1■■□□□ 1.61
CPNE1-216ENST00000437340 MANBAO00462 879 aa25.1■■□□□ 1.61
CPNE1-216ENST00000437340 KRT6AP02538 564 aa25.1■■□□□ 1.61
CPNE1-216ENST00000437340 KRT6BP04259 564 aa25.1■■□□□ 1.61
CPNE1-216ENST00000437340 C8BP07358 591 aa25.1■■□□□ 1.61
CPNE1-216ENST00000437340 EPORP19235 508 aa25.1■■□□□ 1.61
CPNE1-216ENST00000437340 KRT6CP48668 564 aa25.1■■□□□ 1.61
CPNE1-216ENST00000437340 NLRP8Q86W28 1048 aa25.1■■□□□ 1.61
CPNE1-216ENST00000437340 SPATA24Q86W54 205 aa25.1■■□□□ 1.61
CPNE1-216ENST00000437340 ZFAND4Q86XD8 727 aa25.1■■□□□ 1.61
CPNE1-216ENST00000437340 BEND7Q8N7W2 519 aaPredicted RBP25.1■■□□□ 1.61
CPNE1-216ENST00000437340 P2RY13Q9BPV8 354 aa25.1■■□□□ 1.61
CPNE1-216ENST00000437340 CCM2Q9BSQ5 444 aa25.1■■□□□ 1.61
CPNE1-216ENST00000437340 KLHL4Q9C0H6 718 aa25.1■■□□□ 1.61
CPNE1-216ENST00000437340 ACTR8Q9H981 624 aa25.1■■□□□ 1.61
CPNE1-216ENST00000437340 CLDND1Q9NY35 253 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms