RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 HIST1H2ADP20671 130 aa20.63■□□□□ 0.89
PTPRF-207ENST00000436724 ATP6V1C1P21283 382 aa20.63■□□□□ 0.89
PTPRF-207ENST00000436724 PKNOX1P55347 436 aa20.63■□□□□ 0.89
PTPRF-207ENST00000436724 FGL2Q14314 439 aa20.63■□□□□ 0.89
PTPRF-207ENST00000436724 PLA2G4EQ3MJ16 856 aa20.63■□□□□ 0.89
PTPRF-207ENST00000436724 DOK6Q6PKX4 331 aa20.63■□□□□ 0.89
PTPRF-207ENST00000436724 ARHGAP24Q8N264 748 aa20.63■□□□□ 0.89
PTPRF-207ENST00000436724 METTL6Q8TCB7 284 aa20.63■□□□□ 0.89
PTPRF-207ENST00000436724 UBTD2Q8WUN7 234 aa20.63■□□□□ 0.89
PTPRF-207ENST00000436724 HIC2Q96JB3 615 aa20.63■□□□□ 0.89
PTPRF-207ENST00000436724 HIST1H2AHQ96KK5 128 aa20.63■□□□□ 0.89
PTPRF-207ENST00000436724 HIST1H2AJQ99878 128 aa20.63■□□□□ 0.89
PTPRF-207ENST00000436724 H2AFJQ9BTM1 129 aa20.63■□□□□ 0.89
PTPRF-207ENST00000436724 TRIM54Q9BYV2 358 aa20.63■□□□□ 0.89
PTPRF-207ENST00000436724 OSBPL6Q9BZF3 934 aa20.63■□□□□ 0.89
PTPRF-207ENST00000436724 ZCCHC2Q9C0B9 1178 aaKnown RBP20.63■□□□□ 0.89
PTPRF-207ENST00000436724 ST14Q9Y5Y6 855 aa20.63■□□□□ 0.89
PTPRF-207ENST00000436724 MBTPS2O43462 519 aa20.63■□□□□ 0.89
PTPRF-207ENST00000436724 MATN4O95460 622 aa20.63■□□□□ 0.89
PTPRF-207ENST00000436724 ENO2P09104 434 aaPredicted RBP20.63■□□□□ 0.89
PTPRF-207ENST00000436724 CD72P21854 359 aa20.63■□□□□ 0.89
PTPRF-207ENST00000436724 PRDX6P30041 224 aa20.63■□□□□ 0.89
PTPRF-207ENST00000436724 HTR6P50406 440 aa20.63■□□□□ 0.89
PTPRF-207ENST00000436724 CCSMST1Q4G0I0 132 aa20.63■□□□□ 0.89
PTPRF-207ENST00000436724 ZNF658BQ4V348 819 aaPredicted RBP20.63■□□□□ 0.89
PTPRF-207ENST00000436724 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.63■□□□□ 0.89
PTPRF-207ENST00000436724 CFAP206Q8IYR0 622 aa20.63■□□□□ 0.89
PTPRF-207ENST00000436724 OR2T11Q8NH01 316 aa20.63■□□□□ 0.89
PTPRF-207ENST00000436724 THTPAQ9BU02 230 aa20.63■□□□□ 0.89
PTPRF-207ENST00000436724 C1orf21Q9H246 121 aa20.63■□□□□ 0.89
PTPRF-207ENST00000436724 ARHGEF33A8MVX0 844 aa20.62■□□□□ 0.89
PTPRF-207ENST00000436724 SOX1O00570 391 aaPredicted RBP20.62■□□□□ 0.89
PTPRF-207ENST00000436724 OTCP00480 354 aa20.62■□□□□ 0.89
PTPRF-207ENST00000436724 CYP2A7P20853 494 aa20.62■□□□□ 0.89
PTPRF-207ENST00000436724 PIK3CGP48736 1102 aa20.62■□□□□ 0.89
PTPRF-207ENST00000436724 SESN3P58005 492 aa20.62■□□□□ 0.89
PTPRF-207ENST00000436724 SLC34A1Q06495 639 aa20.62■□□□□ 0.89
PTPRF-207ENST00000436724 BLMHQ13867 455 aa20.62■□□□□ 0.89
PTPRF-207ENST00000436724 BCL7AQ4VC05 210 aa20.62■□□□□ 0.89
PTPRF-207ENST00000436724 XKR5Q6UX68 686 aa20.62■□□□□ 0.89
PTPRF-207ENST00000436724 GK5Q6ZS86 529 aa20.62■□□□□ 0.89
PTPRF-207ENST00000436724 NEK10Q6ZWH5 1172 aa20.62■□□□□ 0.89
PTPRF-207ENST00000436724 MILR1Q7Z6M3 343 aa20.62■□□□□ 0.89
PTPRF-207ENST00000436724 SCUBE1Q8IWY4 988 aa20.62■□□□□ 0.89
PTPRF-207ENST00000436724 OR9I1Q8NGQ6 314 aa20.62■□□□□ 0.89
PTPRF-207ENST00000436724 OR14C36Q8NHC7 312 aa20.62■□□□□ 0.89
PTPRF-207ENST00000436724 DNAJC9Q8WXX5 260 aa20.62■□□□□ 0.89
PTPRF-207ENST00000436724 GLMNQ92990 594 aa20.62■□□□□ 0.89
PTPRF-207ENST00000436724 EPHX3Q9H6B9 360 aa20.62■□□□□ 0.89
PTPRF-207ENST00000436724 COLQQ9Y215 455 aaPredicted RBP20.62■□□□□ 0.89
PTPRF-207ENST00000436724 AIM2O14862 343 aa20.62■□□□□ 0.89
PTPRF-207ENST00000436724 CHEK2O96017 543 aa20.62■□□□□ 0.89
PTPRF-207ENST00000436724 GSTM1P09488 218 aa20.62■□□□□ 0.89
PTPRF-207ENST00000436724 THRAP10827 490 aa20.62■□□□□ 0.89
PTPRF-207ENST00000436724 HGFP14210 728 aa20.62■□□□□ 0.89
PTPRF-207ENST00000436724 EPORP19235 508 aa20.62■□□□□ 0.89
PTPRF-207ENST00000436724 GSTM4Q03013 218 aa20.62■□□□□ 0.89
PTPRF-207ENST00000436724 GRSF1Q12849 480 aaKnown RBP eCLIP20.62■□□□□ 0.89
PTPRF-207ENST00000436724 SP140Q13342 867 aa20.62■□□□□ 0.89
PTPRF-207ENST00000436724 CYLC2Q14093 348 aaPredicted RBP20.62■□□□□ 0.89
PTPRF-207ENST00000436724 CCDC6Q16204 474 aa20.62■□□□□ 0.89
PTPRF-207ENST00000436724 MCOLN3Q8TDD5 553 aa20.62■□□□□ 0.89
PTPRF-207ENST00000436724 COX14Q96I36 57 aa20.62■□□□□ 0.89
PTPRF-207ENST00000436724 NUSAP1Q9BXS6 441 aaKnown RBP20.62■□□□□ 0.89
PTPRF-207ENST00000436724 ATG10Q9H0Y0 220 aa20.62■□□□□ 0.89
PTPRF-207ENST00000436724 TRPV5Q9NQA5 729 aa20.62■□□□□ 0.89
PTPRF-207ENST00000436724 NMRK1Q9NWW6 199 aa20.62■□□□□ 0.89
PTPRF-207ENST00000436724 CCDC167Q9P0B6 97 aa20.62■□□□□ 0.89
PTPRF-207ENST00000436724 STX18Q9P2W9 335 aaKnown RBP20.62■□□□□ 0.89
PTPRF-207ENST00000436724 SLC22A2O15244 555 aa20.61■□□□□ 0.89
PTPRF-207ENST00000436724 DNTTP04053 509 aa20.61■□□□□ 0.89
PTPRF-207ENST00000436724 EPB42P16452 691 aa20.61■□□□□ 0.89
PTPRF-207ENST00000436724 VHLP40337 213 aa20.61■□□□□ 0.89
PTPRF-207ENST00000436724 NME5P56597 212 aa20.61■□□□□ 0.89
PTPRF-207ENST00000436724 CDKL1Q00532 357 aa20.61■□□□□ 0.89
PTPRF-207ENST00000436724 INPP5AQ14642 412 aa20.61■□□□□ 0.89
PTPRF-207ENST00000436724 SKIV2LQ15477 1246 aaKnown RBP20.61■□□□□ 0.89
PTPRF-207ENST00000436724 PTCHD3Q3KNS1 767 aa20.61■□□□□ 0.89
PTPRF-207ENST00000436724 SLC44A4Q53GD3 710 aa20.61■□□□□ 0.89
PTPRF-207ENST00000436724 XKR7Q5GH72 579 aa20.61■□□□□ 0.89
PTPRF-207ENST00000436724 RASGRP3Q8IV61 690 aa20.61■□□□□ 0.89
PTPRF-207ENST00000436724 RP9Q8TA86 221 aaKnown RBP20.61■□□□□ 0.89
PTPRF-207ENST00000436724 GAS2L1Q99501 681 aaPredicted RBP20.61■□□□□ 0.89
PTPRF-207ENST00000436724 CD93Q9NPY3 652 aa20.61■□□□□ 0.89
PTPRF-207ENST00000436724 RNF11Q9Y3C5 154 aa20.61■□□□□ 0.89
PTPRF-207ENST00000436724 OR1A2Q9Y585 309 aa20.61■□□□□ 0.89
PTPRF-207ENST00000436724 DNAH14Q0VDD8 3507 aa20.61■□□□□ 0.89
PTPRF-207ENST00000436724 FFAR3O14843 346 aa20.61■□□□□ 0.89
PTPRF-207ENST00000436724 SLC16A5O15375 505 aa20.61■□□□□ 0.89
PTPRF-207ENST00000436724 GPR42O15529 346 aa20.61■□□□□ 0.89
PTPRF-207ENST00000436724 PSIP1O75475 530 aaKnown RBP20.61■□□□□ 0.89
PTPRF-207ENST00000436724 ITGAXP20702 1163 aa20.61■□□□□ 0.89
PTPRF-207ENST00000436724 ADSLP30566 484 aaPredicted RBP20.61■□□□□ 0.89
PTPRF-207ENST00000436724 BDKRB1P46663 353 aa20.61■□□□□ 0.89
PTPRF-207ENST00000436724 CDK3Q00526 305 aa20.61■□□□□ 0.89
PTPRF-207ENST00000436724 GTF2H3Q13889 308 aa20.61■□□□□ 0.89
PTPRF-207ENST00000436724 SQLEQ14534 574 aa20.61■□□□□ 0.89
PTPRF-207ENST00000436724 DNAL1Q4LDG9 190 aa20.61■□□□□ 0.89
PTPRF-207ENST00000436724 ANO7Q6IWH7 933 aa20.61■□□□□ 0.89
PTPRF-207ENST00000436724 ADAMTSL4Q6UY14 1074 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms