RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 FAM96AQ9H5X1 160 aa14.44□□□□□ -0.1
MSH5-208ENST00000429846 LRRC40Q9H9A6 602 aa14.44□□□□□ -0.1
MSH5-208ENST00000429846 NLE1Q9NVX2 485 aaPredicted RBP14.44□□□□□ -0.1
MSH5-208ENST00000429846 PADI2Q9Y2J8 665 aa14.44□□□□□ -0.1
MSH5-208ENST00000429846 C9J4A7 227 aa14.43□□□□□ -0.1
MSH5-208ENST00000429846 LIN7AO14910 233 aaPredicted RBP14.43□□□□□ -0.1
MSH5-208ENST00000429846 SORBS2O94875 1100 aaKnown RBP14.43□□□□□ -0.1
MSH5-208ENST00000429846 AGXTP21549 392 aa14.43□□□□□ -0.1
MSH5-208ENST00000429846 VARSP26640 1264 aaKnown RBP14.43□□□□□ -0.1
MSH5-208ENST00000429846 PDHA2P29803 388 aa14.43□□□□□ -0.1
MSH5-208ENST00000429846 SHMT2P34897 504 aa14.43□□□□□ -0.1
MSH5-208ENST00000429846 NSG1P42857 185 aa14.43□□□□□ -0.1
MSH5-208ENST00000429846 LMAN1P49257 510 aa14.43□□□□□ -0.1
MSH5-208ENST00000429846 CACNG1Q06432 222 aa14.43□□□□□ -0.1
MSH5-208ENST00000429846 BOP1Q14137 746 aaKnown RBP14.43□□□□□ -0.1
MSH5-208ENST00000429846 NCF4Q15080 339 aa14.43□□□□□ -0.1
MSH5-208ENST00000429846 PARP6Q2NL67 630 aa14.43□□□□□ -0.1
MSH5-208ENST00000429846 SPESP1Q6UW49 350 aa14.43□□□□□ -0.1
MSH5-208ENST00000429846 TAS2R42Q7RTR8 314 aa14.43□□□□□ -0.1
MSH5-208ENST00000429846 HOOK3Q86VS8 718 aa14.43□□□□□ -0.1
MSH5-208ENST00000429846 RAB43Q86YS6 212 aa14.43□□□□□ -0.1
MSH5-208ENST00000429846 TMTC1Q8IUR5 882 aa14.43□□□□□ -0.1
MSH5-208ENST00000429846 GPR135Q8IZ08 494 aa14.43□□□□□ -0.1
MSH5-208ENST00000429846 ADGRF3Q8IZF5 1079 aa14.43□□□□□ -0.1
MSH5-208ENST00000429846 STYXQ8WUJ0 223 aa14.43□□□□□ -0.1
MSH5-208ENST00000429846 ALG3Q92685 438 aa14.43□□□□□ -0.1
MSH5-208ENST00000429846 IP6K3Q96PC2 410 aa14.43□□□□□ -0.1
MSH5-208ENST00000429846 FAM118BQ9BPY3 351 aa14.43□□□□□ -0.1
MSH5-208ENST00000429846 HGH1Q9BTY7 390 aa14.43□□□□□ -0.1
MSH5-208ENST00000429846 ACTR10Q9NZ32 417 aa14.43□□□□□ -0.1
MSH5-208ENST00000429846 EPN1Q9Y6I3 576 aaPredicted RBP14.43□□□□□ -0.1
MSH5-208ENST00000429846 SHANK1Q9Y566 2161 aa14.43□□□□□ -0.1
MSH5-208ENST00000429846 FER1L5A0AVI2 2057 aa14.42□□□□□ -0.1
MSH5-208ENST00000429846 CCL22O00626 93 aa14.42□□□□□ -0.1
MSH5-208ENST00000429846 KDM1AO60341 852 aa14.42□□□□□ -0.1
MSH5-208ENST00000429846 FTH1P02794 183 aa14.42□□□□□ -0.1
MSH5-208ENST00000429846 PTMAP06454 111 aaKnown RBP14.42□□□□□ -0.1
MSH5-208ENST00000429846 CAPN1P07384 714 aa14.42□□□□□ -0.1
MSH5-208ENST00000429846 PLOD1Q02809 727 aaPredicted RBP14.42□□□□□ -0.1
MSH5-208ENST00000429846 SPARCL1Q14515 664 aa14.42□□□□□ -0.1
MSH5-208ENST00000429846 ITIH4Q14624 930 aa14.42□□□□□ -0.1
MSH5-208ENST00000429846 NADK2Q4G0N4 442 aa14.42□□□□□ -0.1
MSH5-208ENST00000429846 LCN10Q6JVE6 187 aa14.42□□□□□ -0.1
MSH5-208ENST00000429846 PACS1Q6VY07 963 aa14.42□□□□□ -0.1
MSH5-208ENST00000429846 CDHR3Q6ZTQ4 885 aa14.42□□□□□ -0.1
MSH5-208ENST00000429846 C19orf47Q8N9M1 422 aaKnown RBP14.42□□□□□ -0.1
MSH5-208ENST00000429846 LRRC57Q8N9N7 239 aa14.42□□□□□ -0.1
MSH5-208ENST00000429846 N4BP2L2Q92802 583 aaPredicted RBP14.42□□□□□ -0.1
MSH5-208ENST00000429846 CDKN2AIPNLQ96HQ2 116 aa14.42□□□□□ -0.1
MSH5-208ENST00000429846 ALS2CR12Q96Q35 445 aa14.42□□□□□ -0.1
MSH5-208ENST00000429846 CHRNA10Q9GZZ6 450 aa14.42□□□□□ -0.1
MSH5-208ENST00000429846 POLG2Q9UHN1 485 aa14.42□□□□□ -0.1
MSH5-208ENST00000429846 AP1M2Q9Y6Q5 423 aa14.42□□□□□ -0.1
MSH5-208ENST00000429846 BLACEA4D250 179 aa14.41□□□□□ -0.1
MSH5-208ENST00000429846 RCCD1A6NED2 376 aa14.41□□□□□ -0.1
MSH5-208ENST00000429846 SOWAHDA6NJG2 315 aa14.41□□□□□ -0.1
MSH5-208ENST00000429846 DDX3YO15523 660 aaKnown RBP14.41□□□□□ -0.1
MSH5-208ENST00000429846 PSMD3O43242 534 aa14.41□□□□□ -0.1
MSH5-208ENST00000429846 ZNF749O43361 778 aa14.41□□□□□ -0.1
MSH5-208ENST00000429846 AP2A1O95782 977 aa14.41□□□□□ -0.1
MSH5-208ENST00000429846 CD63P08962 238 aa14.41□□□□□ -0.1
MSH5-208ENST00000429846 PSMA3P25788 255 aa14.41□□□□□ -0.1
MSH5-208ENST00000429846 UQCRFS1P47985 274 aa14.41□□□□□ -0.1
MSH5-208ENST00000429846 CDKN1CP49918 316 aaPredicted RBP14.41□□□□□ -0.1
MSH5-208ENST00000429846 POU6F1Q14863 301 aa14.41□□□□□ -0.1
MSH5-208ENST00000429846 DBN1Q16643 649 aa14.41□□□□□ -0.1
MSH5-208ENST00000429846 PTCHD3Q3KNS1 767 aa14.41□□□□□ -0.1
MSH5-208ENST00000429846 FHL5Q5TD97 284 aa14.41□□□□□ -0.1
MSH5-208ENST00000429846 ZNF385CQ66K41 422 aaPredicted RBP14.41□□□□□ -0.1
MSH5-208ENST00000429846 LINC00523Q86TU6 105 aa14.41□□□□□ -0.1
MSH5-208ENST00000429846 TBC1D21Q8IYX1 336 aa14.41□□□□□ -0.1
MSH5-208ENST00000429846 CLDN19Q8N6F1 224 aa14.41□□□□□ -0.1
MSH5-208ENST00000429846 UBL4BQ8N7F7 174 aa14.41□□□□□ -0.1
MSH5-208ENST00000429846 GLIS1Q8NBF1 620 aa14.41□□□□□ -0.1
MSH5-208ENST00000429846 PHC3Q8NDX5 983 aa14.41□□□□□ -0.1
MSH5-208ENST00000429846 FDCSPQ8NFU4 85 aa14.41□□□□□ -0.1
MSH5-208ENST00000429846 TCTN2Q96GX1 697 aa14.41□□□□□ -0.1
MSH5-208ENST00000429846 LRRC4CQ9HCJ2 640 aa14.41□□□□□ -0.1
MSH5-208ENST00000429846 GPR83Q9NYM4 423 aa14.41□□□□□ -0.1
MSH5-208ENST00000429846 OR6C2Q9NZP2 312 aa14.41□□□□□ -0.1
MSH5-208ENST00000429846 ICKQ9UPZ9 632 aa14.41□□□□□ -0.1
MSH5-208ENST00000429846 ASF1AQ9Y294 204 aa14.41□□□□□ -0.1
MSH5-208ENST00000429846 MAP4K5Q9Y4K4 846 aa14.41□□□□□ -0.1
MSH5-208ENST00000429846 ERI2A8K979 691 aaKnown RBP14.4□□□□□ -0.1
MSH5-208ENST00000429846 MIF4GDA9UHW6 222 aaKnown RBP14.4□□□□□ -0.1
MSH5-208ENST00000429846 F8W8V4 182 aa14.4□□□□□ -0.1
MSH5-208ENST00000429846 AGFG2O95081 481 aa14.4□□□□□ -0.1
MSH5-208ENST00000429846 IGHEP01854 428 aa14.4□□□□□ -0.1
MSH5-208ENST00000429846 PVRP15151 417 aa14.4□□□□□ -0.1
MSH5-208ENST00000429846 GNLYP22749 145 aa14.4□□□□□ -0.1
MSH5-208ENST00000429846 MSNP26038 577 aaKnown RBP14.4□□□□□ -0.1
MSH5-208ENST00000429846 PRKG2Q13237 762 aa14.4□□□□□ -0.1
MSH5-208ENST00000429846 ESPL1Q14674 2120 aa14.4□□□□□ -0.1
MSH5-208ENST00000429846 RHBDD2Q6NTF9 364 aa14.4□□□□□ -0.1
MSH5-208ENST00000429846 JMJD6Q6NYC1 403 aaPredicted RBP14.4□□□□□ -0.1
MSH5-208ENST00000429846 AADACL2Q6P093 401 aa14.4□□□□□ -0.1
MSH5-208ENST00000429846 PIANPQ8IYJ0 282 aa14.4□□□□□ -0.1
MSH5-208ENST00000429846 ZBTB2Q8N680 514 aa14.4□□□□□ -0.1
MSH5-208ENST00000429846 FAM71DQ8N9W8 422 aa14.4□□□□□ -0.1
MSH5-208ENST00000429846 OR5K2Q8NHB8 316 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms