RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 P4HTMQ9NXG6 502 aa17.72■□□□□ 0.43
UPK3BP1-201ENST00000428678 ACTR10Q9NZ32 417 aa17.72■□□□□ 0.43
UPK3BP1-201ENST00000428678 NDOR1Q9UHB4 597 aa17.72■□□□□ 0.43
UPK3BP1-201ENST00000428678 NTNG1Q9Y2I2 539 aa17.72■□□□□ 0.43
UPK3BP1-201ENST00000428678 ZGRF1Q86YA3 2104 aa17.72■□□□□ 0.43
UPK3BP1-201ENST00000428678 CFAP99D6REC4 459 aa17.71■□□□□ 0.43
UPK3BP1-201ENST00000428678 MASP2O00187 686 aa17.71■□□□□ 0.43
UPK3BP1-201ENST00000428678 SPOPO43791 374 aa17.71■□□□□ 0.43
UPK3BP1-201ENST00000428678 AKR1B10O60218 316 aa17.71■□□□□ 0.43
UPK3BP1-201ENST00000428678 OR2B3O76000 313 aa17.71■□□□□ 0.43
UPK3BP1-201ENST00000428678 PRKG2Q13237 762 aa17.71■□□□□ 0.43
UPK3BP1-201ENST00000428678 SLC9A5Q14940 896 aa17.71■□□□□ 0.43
UPK3BP1-201ENST00000428678 TAF1AQ15573 450 aaPredicted RBP17.71■□□□□ 0.43
UPK3BP1-201ENST00000428678 DEFB110Q30KQ9 67 aa17.71■□□□□ 0.43
UPK3BP1-201ENST00000428678 CAVIN1Q6NZI2 390 aaKnown RBP17.71■□□□□ 0.43
UPK3BP1-201ENST00000428678 CUZD1Q86UP6 607 aa17.71■□□□□ 0.43
UPK3BP1-201ENST00000428678 TRIM73Q86UV7 250 aa17.71■□□□□ 0.43
UPK3BP1-201ENST00000428678 RHOT2Q8IXI1 618 aa17.71■□□□□ 0.43
UPK3BP1-201ENST00000428678 COPS8Q99627 209 aa17.71■□□□□ 0.43
UPK3BP1-201ENST00000428678 ANP32EQ9BTT0 268 aa17.71■□□□□ 0.43
UPK3BP1-201ENST00000428678 TFB2MQ9H5Q4 396 aaKnown RBP17.71■□□□□ 0.43
UPK3BP1-201ENST00000428678 FAM96AQ9H5X1 160 aa17.71■□□□□ 0.43
UPK3BP1-201ENST00000428678 MVB12BQ9H7P6 319 aa17.71■□□□□ 0.43
UPK3BP1-201ENST00000428678 COG4Q9H9E3 785 aa17.71■□□□□ 0.43
UPK3BP1-201ENST00000428678 AGPAT4Q9NRZ5 378 aa17.71■□□□□ 0.43
UPK3BP1-201ENST00000428678 IFT80Q9P2H3 777 aaPredicted RBP17.71■□□□□ 0.43
UPK3BP1-201ENST00000428678 PCDHGA10Q9Y5H3 936 aa17.71■□□□□ 0.43
UPK3BP1-201ENST00000428678 AP1M2Q9Y6Q5 423 aa17.71■□□□□ 0.43
UPK3BP1-201ENST00000428678 CROCCQ5TZA2 2017 aa17.71■□□□□ 0.42
UPK3BP1-201ENST00000428678 ATP1B2P14415 290 aaPredicted RBP17.7■□□□□ 0.42
UPK3BP1-201ENST00000428678 SLC1A1P43005 524 aa17.7■□□□□ 0.42
UPK3BP1-201ENST00000428678 XIAPP98170 497 aa17.7■□□□□ 0.42
UPK3BP1-201ENST00000428678 CYP2A13Q16696 494 aa17.7■□□□□ 0.42
UPK3BP1-201ENST00000428678 ASTE1Q2TB18 679 aaPredicted RBP17.7■□□□□ 0.42
UPK3BP1-201ENST00000428678 CRB2Q5IJ48 1285 aa17.7■□□□□ 0.42
UPK3BP1-201ENST00000428678 SPESP1Q6UW49 350 aa17.7■□□□□ 0.42
UPK3BP1-201ENST00000428678 Q6ZS92 163 aa17.7■□□□□ 0.42
UPK3BP1-201ENST00000428678 ADGRF3Q8IZF5 1079 aa17.7■□□□□ 0.42
UPK3BP1-201ENST00000428678 NXPE1Q8N323 547 aa17.7■□□□□ 0.42
UPK3BP1-201ENST00000428678 C19orf47Q8N9M1 422 aaKnown RBP17.7■□□□□ 0.42
UPK3BP1-201ENST00000428678 OR2Y1Q8NGV0 311 aa17.7■□□□□ 0.42
UPK3BP1-201ENST00000428678 ULK4Q96C45 1275 aa17.7■□□□□ 0.42
UPK3BP1-201ENST00000428678 QKIQ96PU8 341 aaKnown RBP eCLIP17.7■□□□□ 0.42
UPK3BP1-201ENST00000428678 APOL2Q9BQE5 337 aa17.7■□□□□ 0.42
UPK3BP1-201ENST00000428678 SPRTNQ9H040 489 aaPredicted RBP17.7■□□□□ 0.42
UPK3BP1-201ENST00000428678 OR52A5Q9H2C5 316 aa17.7■□□□□ 0.42
UPK3BP1-201ENST00000428678 ZBTB20Q9HC78 741 aaPredicted RBP17.7■□□□□ 0.42
UPK3BP1-201ENST00000428678 FAM60AQ9NP50 221 aa17.7■□□□□ 0.42
UPK3BP1-201ENST00000428678 IFNKQ9P0W0 207 aa17.7■□□□□ 0.42
UPK3BP1-201ENST00000428678 TRHDEQ9UKU6 1024 aa17.7■□□□□ 0.42
UPK3BP1-201ENST00000428678 CDYLQ9Y232 598 aa17.7■□□□□ 0.42
UPK3BP1-201ENST00000428678 DOCK10Q96BY6 2186 aa17.7■□□□□ 0.42
UPK3BP1-201ENST00000428678 C17orf113A0A1B0GUU1 675 aa17.69■□□□□ 0.42
UPK3BP1-201ENST00000428678 C5orf60A6NFR6 353 aa17.69■□□□□ 0.42
UPK3BP1-201ENST00000428678 CD63P08962 238 aa17.69■□□□□ 0.42
UPK3BP1-201ENST00000428678 ITGALP20701 1170 aa17.69■□□□□ 0.42
UPK3BP1-201ENST00000428678 PDHA2P29803 388 aa17.69■□□□□ 0.42
UPK3BP1-201ENST00000428678 GEMP55040 296 aa17.69■□□□□ 0.42
UPK3BP1-201ENST00000428678 FOXL2P58012 376 aa17.69■□□□□ 0.42
UPK3BP1-201ENST00000428678 DCDP81605 110 aaKnown RBP17.69■□□□□ 0.42
UPK3BP1-201ENST00000428678 TMPRSS15P98073 1019 aa17.69■□□□□ 0.42
UPK3BP1-201ENST00000428678 TAZQ16635 292 aa17.69■□□□□ 0.42
UPK3BP1-201ENST00000428678 RHBDD2Q6NTF9 364 aa17.69■□□□□ 0.42
UPK3BP1-201ENST00000428678 ZNF449Q6P9G9 518 aa17.69■□□□□ 0.42
UPK3BP1-201ENST00000428678 PPP1R32Q7Z5V6 425 aa17.69■□□□□ 0.42
UPK3BP1-201ENST00000428678 ST6GALNAC3Q8NDV1 305 aa17.69■□□□□ 0.42
UPK3BP1-201ENST00000428678 OR13C4Q8NGS5 318 aa17.69■□□□□ 0.42
UPK3BP1-201ENST00000428678 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.69■□□□□ 0.42
UPK3BP1-201ENST00000428678 GBP5Q96PP8 586 aa17.69■□□□□ 0.42
UPK3BP1-201ENST00000428678 BARD1Q99728 777 aaKnown RBP17.69■□□□□ 0.42
UPK3BP1-201ENST00000428678 ATP13A2Q9NQ11 1180 aa17.69■□□□□ 0.42
UPK3BP1-201ENST00000428678 TXLNGQ9NUQ3 528 aa17.69■□□□□ 0.42
UPK3BP1-201ENST00000428678 IRAK4Q9NWZ3 460 aa17.69■□□□□ 0.42
UPK3BP1-201ENST00000428678 DHCR7Q9UBM7 475 aaKnown RBP17.69■□□□□ 0.42
UPK3BP1-201ENST00000428678 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.69■□□□□ 0.42
UPK3BP1-201ENST00000428678 SNRNP200O75643 2136 aaKnown RBP17.69■□□□□ 0.42
UPK3BP1-201ENST00000428678 PCM1Q15154 2024 aa17.69■□□□□ 0.42
UPK3BP1-201ENST00000428678 C2CD3Q4AC94 2353 aa17.68■□□□□ 0.42
UPK3BP1-201ENST00000428678 ZSCAN9O15535 394 aaPredicted RBP17.68■□□□□ 0.42
UPK3BP1-201ENST00000428678 HCRTR1O43613 425 aa17.68■□□□□ 0.42
UPK3BP1-201ENST00000428678 ANXA9O76027 345 aa17.68■□□□□ 0.42
UPK3BP1-201ENST00000428678 COMTP21964 271 aa17.68■□□□□ 0.42
UPK3BP1-201ENST00000428678 ITGA3P26006 1051 aa17.68■□□□□ 0.42
UPK3BP1-201ENST00000428678 ANP32AP39687 249 aaKnown RBP17.68■□□□□ 0.42
UPK3BP1-201ENST00000428678 CD151P48509 253 aa17.68■□□□□ 0.42
UPK3BP1-201ENST00000428678 OLIG2Q13516 323 aa17.68■□□□□ 0.42
UPK3BP1-201ENST00000428678 SLC34A3Q8N130 599 aa17.68■□□□□ 0.42
UPK3BP1-201ENST00000428678 ZNF655Q8N720 491 aaPredicted RBP17.68■□□□□ 0.42
UPK3BP1-201ENST00000428678 PROKR1Q8TCW9 393 aa17.68■□□□□ 0.42
UPK3BP1-201ENST00000428678 HEXDCQ8WVB3 486 aa17.68■□□□□ 0.42
UPK3BP1-201ENST00000428678 TFGQ92734 400 aaPredicted RBP17.68■□□□□ 0.42
UPK3BP1-201ENST00000428678 PTERQ96BW5 349 aa17.68■□□□□ 0.42
UPK3BP1-201ENST00000428678 WDR77Q9BQA1 342 aaPredicted RBP17.68■□□□□ 0.42
UPK3BP1-201ENST00000428678 AP1M1Q9BXS5 423 aa17.68■□□□□ 0.42
UPK3BP1-201ENST00000428678 GBA3Q9H227 469 aa17.68■□□□□ 0.42
UPK3BP1-201ENST00000428678 VPS37BQ9H9H4 285 aa17.68■□□□□ 0.42
UPK3BP1-201ENST00000428678 SPTLC3Q9NUV7 552 aa17.68■□□□□ 0.42
UPK3BP1-201ENST00000428678 ZNHIT6Q9NWK9 470 aaKnown RBP17.68■□□□□ 0.42
UPK3BP1-201ENST00000428678 AGAP14A8MT82 685 aa17.67■□□□□ 0.42
UPK3BP1-201ENST00000428678 HACD1B0YJ81 288 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms