RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 CD1DP15813 335 aa15.03■□□□□ -0
COL11A1-204ENST00000427239 SLC19A1P41440 591 aa15.03■□□□□ -0
COL11A1-204ENST00000427239 RPIAP49247 311 aa15.03■□□□□ -0
COL11A1-204ENST00000427239 SP140Q13342 867 aa15.03■□□□□ -0
COL11A1-204ENST00000427239 KRT33BQ14525 404 aa15.03■□□□□ -0
COL11A1-204ENST00000427239 TSNAXIP1Q2TAA8 658 aa15.03■□□□□ -0
COL11A1-204ENST00000427239 CLEC14AQ86T13 490 aa15.03■□□□□ -0
COL11A1-204ENST00000427239 TRIM48Q8IWZ4 208 aa15.03■□□□□ -0
COL11A1-204ENST00000427239 SRRM1Q8IYB3 904 aaKnown RBP15.03■□□□□ -0
COL11A1-204ENST00000427239 CENPLQ8N0S6 344 aaPredicted RBP15.03■□□□□ -0
COL11A1-204ENST00000427239 ARL10Q8N8L6 244 aa15.03■□□□□ -0
COL11A1-204ENST00000427239 OR5K2Q8NHB8 316 aa15.03■□□□□ -0
COL11A1-204ENST00000427239 CFAP61Q8NHU2 1237 aa15.03■□□□□ -0
COL11A1-204ENST00000427239 MAPK15Q8TD08 544 aa15.03■□□□□ -0
COL11A1-204ENST00000427239 ALKBH8Q96BT7 664 aaKnown RBP15.03■□□□□ -0
COL11A1-204ENST00000427239 SMC6Q96SB8 1091 aa15.03■□□□□ -0
COL11A1-204ENST00000427239 SLC12A9Q9BXP2 914 aa15.03■□□□□ -0
COL11A1-204ENST00000427239 TRIT1Q9H3H1 467 aaKnown RBP15.03■□□□□ -0
COL11A1-204ENST00000427239 STN1Q9H668 368 aaKnown RBP15.03■□□□□ -0
COL11A1-204ENST00000427239 POT1Q9NUX5 634 aa15.03■□□□□ -0
COL11A1-204ENST00000427239 IMP3Q9NV31 184 aaKnown RBP15.03■□□□□ -0
COL11A1-204ENST00000427239 ZNF624Q9P2J8 865 aaPredicted RBP15.03■□□□□ -0
COL11A1-204ENST00000427239 CPNE7Q9UBL6 633 aa15.03■□□□□ -0
COL11A1-204ENST00000427239 ACTL7BQ9Y614 415 aa15.03■□□□□ -0
COL11A1-204ENST00000427239 RIF1Q5UIP0 2472 aaKnown RBP15.03■□□□□ -0
COL11A1-204ENST00000427239 TRBV23OR9-2A0A075B6M9 112 aa15.03■□□□□ -0
COL11A1-204ENST00000427239 GOLGA8RI6L899 631 aa15.03■□□□□ -0
COL11A1-204ENST00000427239 TRIM38O00635 465 aa15.03■□□□□ -0
COL11A1-204ENST00000427239 KDM1AO60341 852 aa15.03■□□□□ -0
COL11A1-204ENST00000427239 NOBOXO60393 691 aa15.03■□□□□ -0
COL11A1-204ENST00000427239 VIPP01282 170 aa15.03■□□□□ -0
COL11A1-204ENST00000427239 FASLGP48023 281 aa15.03■□□□□ -0
COL11A1-204ENST00000427239 KPNA2P52292 529 aaKnown RBP15.03■□□□□ -0
COL11A1-204ENST00000427239 SLC18A2Q05940 514 aa15.03■□□□□ -0
COL11A1-204ENST00000427239 C14orf28Q4W4Y0 310 aa15.03■□□□□ -0
COL11A1-204ENST00000427239 ADAMTSL2Q86TH1 951 aa15.03■□□□□ -0
COL11A1-204ENST00000427239 ARL14Q8N4G2 192 aa15.03■□□□□ -0
COL11A1-204ENST00000427239 SPATA6LQ8N4H0 392 aa15.03■□□□□ -0
COL11A1-204ENST00000427239 EID2Q8N6I1 236 aa15.03■□□□□ -0
COL11A1-204ENST00000427239 FBXO15Q8NCQ5 510 aaPredicted RBP15.03■□□□□ -0
COL11A1-204ENST00000427239 OR6C4Q8NGE1 309 aa15.03■□□□□ -0
COL11A1-204ENST00000427239 RHEBL1Q8TAI7 183 aa15.03■□□□□ -0
COL11A1-204ENST00000427239 STAG3L4Q8TBR4 150 aa15.03■□□□□ -0
COL11A1-204ENST00000427239 MCOLN3Q8TDD5 553 aa15.03■□□□□ -0
COL11A1-204ENST00000427239 SLC37A2Q8TED4 501 aa15.03■□□□□ -0
COL11A1-204ENST00000427239 KCTD4Q8WVF5 259 aa15.03■□□□□ -0
COL11A1-204ENST00000427239 SH3KBP1Q96B97 665 aa15.03■□□□□ -0
COL11A1-204ENST00000427239 NXNL1Q96CM4 212 aa15.03■□□□□ -0
COL11A1-204ENST00000427239 FERD3LQ96RJ6 166 aa15.03■□□□□ -0
COL11A1-204ENST00000427239 TFB2MQ9H5Q4 396 aaKnown RBP15.03■□□□□ -0
COL11A1-204ENST00000427239 PARVBQ9HBI1 364 aa15.03■□□□□ -0
COL11A1-204ENST00000427239 SLC40A1Q9NP59 571 aa15.03■□□□□ -0
COL11A1-204ENST00000427239 IGSF5Q9NSI5 407 aa15.03■□□□□ -0
COL11A1-204ENST00000427239 PCMTD2Q9NV79 361 aa15.03■□□□□ -0
COL11A1-204ENST00000427239 SIRPGQ9P1W8 387 aa15.03■□□□□ -0
COL11A1-204ENST00000427239 NOVA2Q9UNW9 492 aaKnown RBP15.03■□□□□ -0
COL11A1-204ENST00000427239 CFAP20Q9Y6A4 193 aaKnown RBP15.03■□□□□ -0
COL11A1-204ENST00000427239 TP53BP1Q12888 1972 aaPredicted RBP15.03■□□□□ -0
COL11A1-204ENST00000427239 C4orf47A7E2U8 309 aa15.02□□□□□ -0.01
COL11A1-204ENST00000427239 FOXO6A8MYZ6 492 aa15.02□□□□□ -0.01
COL11A1-204ENST00000427239 BTN3A1O00481 513 aa15.02□□□□□ -0.01
COL11A1-204ENST00000427239 C1orf105O95561 183 aa15.02□□□□□ -0.01
COL11A1-204ENST00000427239 ENO2P09104 434 aaPredicted RBP15.02□□□□□ -0.01
COL11A1-204ENST00000427239 HIST1H2AGP0C0S8 130 aaPredicted RBP15.02□□□□□ -0.01
COL11A1-204ENST00000427239 HIST1H2ADP20671 130 aa15.02□□□□□ -0.01
COL11A1-204ENST00000427239 CYP2A7P20853 494 aa15.02□□□□□ -0.01
COL11A1-204ENST00000427239 MAP4P27816 1152 aaKnown RBP15.02□□□□□ -0.01
COL11A1-204ENST00000427239 CRHR1P34998 444 aa15.02□□□□□ -0.01
COL11A1-204ENST00000427239 UBE2IP63279 158 aaKnown RBP15.02□□□□□ -0.01
COL11A1-204ENST00000427239 IRF9Q00978 393 aa15.02□□□□□ -0.01
COL11A1-204ENST00000427239 DLG1Q12959 904 aa15.02□□□□□ -0.01
COL11A1-204ENST00000427239 UBE2R2Q712K3 238 aaPredicted RBP15.02□□□□□ -0.01
COL11A1-204ENST00000427239 ISCA2Q86U28 154 aa15.02□□□□□ -0.01
COL11A1-204ENST00000427239 RASGRP3Q8IV61 690 aa15.02□□□□□ -0.01
COL11A1-204ENST00000427239 PHC3Q8NDX5 983 aa15.02□□□□□ -0.01
COL11A1-204ENST00000427239 RHBDD1Q8TEB9 315 aa15.02□□□□□ -0.01
COL11A1-204ENST00000427239 PATE1Q8WXA2 126 aa15.02□□□□□ -0.01
COL11A1-204ENST00000427239 KIAA1191Q96A73 305 aa15.02□□□□□ -0.01
COL11A1-204ENST00000427239 RAD51AP1Q96B01 352 aa15.02□□□□□ -0.01
COL11A1-204ENST00000427239 HIST1H2AHQ96KK5 128 aa15.02□□□□□ -0.01
COL11A1-204ENST00000427239 HIST1H2AJQ99878 128 aa15.02□□□□□ -0.01
COL11A1-204ENST00000427239 SH3GL2Q99962 352 aa15.02□□□□□ -0.01
COL11A1-204ENST00000427239 H2AFJQ9BTM1 129 aa15.02□□□□□ -0.01
COL11A1-204ENST00000427239 TRIM54Q9BYV2 358 aa15.02□□□□□ -0.01
COL11A1-204ENST00000427239 RAPGEFL1Q9UHV5 662 aa15.02□□□□□ -0.01
COL11A1-204ENST00000427239 TSR3Q9UJK0 312 aaKnown RBP15.02□□□□□ -0.01
COL11A1-204ENST00000427239 GRID1Q9ULK0 1009 aa15.02□□□□□ -0.01
COL11A1-204ENST00000427239 COPEO14579 308 aa15.01□□□□□ -0.01
COL11A1-204ENST00000427239 SIGLEC6O43699 453 aa15.01□□□□□ -0.01
COL11A1-204ENST00000427239 NUDT21O43809 227 aaKnown RBP15.01□□□□□ -0.01
COL11A1-204ENST00000427239 RBP1P09455 135 aa15.01□□□□□ -0.01
COL11A1-204ENST00000427239 CD59P13987 128 aa15.01□□□□□ -0.01
COL11A1-204ENST00000427239 HHEXQ03014 270 aa15.01□□□□□ -0.01
COL11A1-204ENST00000427239 BIRC2Q13490 618 aa15.01□□□□□ -0.01
COL11A1-204ENST00000427239 AGBL2Q5U5Z8 902 aa15.01□□□□□ -0.01
COL11A1-204ENST00000427239 EXOC3L1Q86VI1 746 aa15.01□□□□□ -0.01
COL11A1-204ENST00000427239 SPNS2Q8IVW8 549 aa15.01□□□□□ -0.01
COL11A1-204ENST00000427239 DCUN1D3Q8IWE4 304 aa15.01□□□□□ -0.01
COL11A1-204ENST00000427239 SLC35F3Q8IY50 421 aa15.01□□□□□ -0.01
COL11A1-204ENST00000427239 PLD6Q8N2A8 252 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms