RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 EFL1Q7Z2Z2 1120 aaKnown RBP16.56■□□□□ 0.24
COL7A1-202ENST00000422991 GLRX5Q86SX6 157 aa16.56■□□□□ 0.24
COL7A1-202ENST00000422991 RASGRP3Q8IV61 690 aa16.56■□□□□ 0.24
COL7A1-202ENST00000422991 RBM12BQ8IXT5 1001 aaKnown RBP16.56■□□□□ 0.24
COL7A1-202ENST00000422991 TBC1D21Q8IYX1 336 aa16.56■□□□□ 0.24
COL7A1-202ENST00000422991 CNPY4Q8N129 248 aa16.56■□□□□ 0.24
COL7A1-202ENST00000422991 NKAPQ8N5F7 415 aaKnown RBP16.56■□□□□ 0.24
COL7A1-202ENST00000422991 OR5AR1Q8NGP9 310 aa16.56■□□□□ 0.24
COL7A1-202ENST00000422991 OR5K2Q8NHB8 316 aa16.56■□□□□ 0.24
COL7A1-202ENST00000422991 CFAP61Q8NHU2 1237 aa16.56■□□□□ 0.24
COL7A1-202ENST00000422991 MZB1Q8WU39 189 aa16.56■□□□□ 0.24
COL7A1-202ENST00000422991 ANKRD49Q8WVL7 239 aa16.56■□□□□ 0.24
COL7A1-202ENST00000422991 CCDC74AQ96AQ1 378 aa16.56■□□□□ 0.24
COL7A1-202ENST00000422991 PDLIM5Q96HC4 596 aaKnown RBP16.56■□□□□ 0.24
COL7A1-202ENST00000422991 FOPNLQ96NB1 174 aa16.56■□□□□ 0.24
COL7A1-202ENST00000422991 TMEM109Q9BVC6 243 aa16.56■□□□□ 0.24
COL7A1-202ENST00000422991 TRIT1Q9H3H1 467 aaKnown RBP16.56■□□□□ 0.24
COL7A1-202ENST00000422991 SLC32A1Q9H598 525 aa16.56■□□□□ 0.24
COL7A1-202ENST00000422991 UCK1Q9HA47 277 aa16.56■□□□□ 0.24
COL7A1-202ENST00000422991 SYTL2Q9HCH5 934 aa16.56■□□□□ 0.24
COL7A1-202ENST00000422991 ARGLU1Q9NWB6 273 aaPredicted RBP16.56■□□□□ 0.24
COL7A1-202ENST00000422991 LRIT1Q9P2V4 623 aa16.56■□□□□ 0.24
COL7A1-202ENST00000422991 NCOR2Q9Y618 2525 aa16.56■□□□□ 0.24
COL7A1-202ENST00000422991 SPTBN2O15020 2390 aa16.56■□□□□ 0.24
COL7A1-202ENST00000422991 RP1P56715 2156 aa16.55■□□□□ 0.24
COL7A1-202ENST00000422991 CNOT1A5YKK6 2376 aaKnown RBP16.55■□□□□ 0.24
COL7A1-202ENST00000422991 CPED1A4D0V7 1026 aa16.55■□□□□ 0.24
COL7A1-202ENST00000422991 RHPN2P1A8MT19 583 aa16.55■□□□□ 0.24
COL7A1-202ENST00000422991 RASGRF2O14827 1237 aa16.55■□□□□ 0.24
COL7A1-202ENST00000422991 PSIP1O75475 530 aaKnown RBP16.55■□□□□ 0.24
COL7A1-202ENST00000422991 RPN2P04844 631 aa16.55■□□□□ 0.24
COL7A1-202ENST00000422991 MAPK9P45984 424 aa16.55■□□□□ 0.24
COL7A1-202ENST00000422991 ACADVLP49748 655 aa16.55■□□□□ 0.24
COL7A1-202ENST00000422991 BIRC2Q13490 618 aa16.55■□□□□ 0.24
COL7A1-202ENST00000422991 GPR18Q14330 331 aa16.55■□□□□ 0.24
COL7A1-202ENST00000422991 PERM1Q5SV97 790 aa16.55■□□□□ 0.24
COL7A1-202ENST00000422991 FBXO38Q6PIJ6 1188 aa16.55■□□□□ 0.24
COL7A1-202ENST00000422991 TMEM26Q6ZUK4 368 aa16.55■□□□□ 0.24
COL7A1-202ENST00000422991 RAPH1Q70E73 1250 aa16.55■□□□□ 0.24
COL7A1-202ENST00000422991 CCDC91Q7Z6B0 441 aa16.55■□□□□ 0.24
COL7A1-202ENST00000422991 DCUN1D3Q8IWE4 304 aa16.55■□□□□ 0.24
COL7A1-202ENST00000422991 IQCKQ8N0W5 287 aa16.55■□□□□ 0.24
COL7A1-202ENST00000422991 MYO1HQ8N1T3 1032 aa16.55■□□□□ 0.24
COL7A1-202ENST00000422991 RIBC1Q8N443 379 aaPredicted RBP16.55■□□□□ 0.24
COL7A1-202ENST00000422991 PHC3Q8NDX5 983 aa16.55■□□□□ 0.24
COL7A1-202ENST00000422991 IFI44Q8TCB0 444 aa16.55■□□□□ 0.24
COL7A1-202ENST00000422991 ASB11Q8WXH4 323 aa16.55■□□□□ 0.24
COL7A1-202ENST00000422991 SH3KBP1Q96B97 665 aa16.55■□□□□ 0.24
COL7A1-202ENST00000422991 UBXN10Q96LJ8 280 aa16.55■□□□□ 0.24
COL7A1-202ENST00000422991 FERD3LQ96RJ6 166 aa16.55■□□□□ 0.24
COL7A1-202ENST00000422991 HGH1Q9BTY7 390 aa16.55■□□□□ 0.24
COL7A1-202ENST00000422991 ROPN1BQ9BZX4 212 aaPredicted RBP16.55■□□□□ 0.24
COL7A1-202ENST00000422991 KIR3DX1Q9H7L2 352 aa16.55■□□□□ 0.24
COL7A1-202ENST00000422991 ROPN1Q9HAT0 212 aaPredicted RBP16.55■□□□□ 0.24
COL7A1-202ENST00000422991 TBK1Q9UHD2 729 aa16.55■□□□□ 0.24
COL7A1-202ENST00000422991 COLEC10Q9Y6Z7 277 aa16.55■□□□□ 0.24
COL7A1-202ENST00000422991 ASXL3Q9C0F0 2248 aa16.55■□□□□ 0.24
COL7A1-202ENST00000422991 PCNX2A6NKB5 2137 aa16.55■□□□□ 0.24
COL7A1-202ENST00000422991 A0A087X1B8 175 aa16.54■□□□□ 0.24
COL7A1-202ENST00000422991 UQCRHLA0A096LP55 91 aa16.54■□□□□ 0.24
COL7A1-202ENST00000422991 LILRA5A6NI73 299 aa16.54■□□□□ 0.24
COL7A1-202ENST00000422991 ARHGEF33A8MVX0 844 aa16.54■□□□□ 0.24
COL7A1-202ENST00000422991 GFYI3L273 518 aa16.54■□□□□ 0.24
COL7A1-202ENST00000422991 C1orf105O95561 183 aa16.54■□□□□ 0.24
COL7A1-202ENST00000422991 C2P06681 752 aa16.54■□□□□ 0.24
COL7A1-202ENST00000422991 UQCRHP07919 91 aa16.54■□□□□ 0.24
COL7A1-202ENST00000422991 CCDC166P0CW27 439 aa16.54■□□□□ 0.24
COL7A1-202ENST00000422991 PNLIPP16233 465 aa16.54■□□□□ 0.24
COL7A1-202ENST00000422991 TYK2P29597 1187 aa16.54■□□□□ 0.24
COL7A1-202ENST00000422991 GMPRP36959 345 aa16.54■□□□□ 0.24
COL7A1-202ENST00000422991 CCNFP41002 786 aa16.54■□□□□ 0.24
COL7A1-202ENST00000422991 GPR3P46089 330 aa16.54■□□□□ 0.24
COL7A1-202ENST00000422991 BDKRB1P46663 353 aa16.54■□□□□ 0.24
COL7A1-202ENST00000422991 ZNF844Q08AG5 666 aa16.54■□□□□ 0.24
COL7A1-202ENST00000422991 KRT33BQ14525 404 aa16.54■□□□□ 0.24
COL7A1-202ENST00000422991 TRIP6Q15654 476 aaKnown RBP16.54■□□□□ 0.24
COL7A1-202ENST00000422991 TAF1BQ53T94 588 aaPredicted RBP16.54■□□□□ 0.24
COL7A1-202ENST00000422991 TIFABQ6ZNK6 161 aa16.54■□□□□ 0.24
COL7A1-202ENST00000422991 ZNF761Q86XN6 746 aaPredicted RBP16.54■□□□□ 0.24
COL7A1-202ENST00000422991 ZFPM2Q8WW38 1151 aa16.54■□□□□ 0.24
COL7A1-202ENST00000422991 ZIM3Q96PE6 472 aa16.54■□□□□ 0.24
COL7A1-202ENST00000422991 DERL2Q9GZP9 239 aa16.54■□□□□ 0.24
COL7A1-202ENST00000422991 LGALS13Q9UHV8 139 aa16.54■□□□□ 0.24
COL7A1-202ENST00000422991 A0A096LPK6 155 aa16.53■□□□□ 0.24
COL7A1-202ENST00000422991 RFPL1O75677 317 aa16.53■□□□□ 0.24
COL7A1-202ENST00000422991 CATP04040 527 aaKnown RBP16.53■□□□□ 0.24
COL7A1-202ENST00000422991 GP1BAP07359 652 aa16.53■□□□□ 0.24
COL7A1-202ENST00000422991 C8GP07360 202 aa16.53■□□□□ 0.24
COL7A1-202ENST00000422991 SLC26A3P40879 764 aa16.53■□□□□ 0.24
COL7A1-202ENST00000422991 IRF9Q00978 393 aa16.53■□□□□ 0.24
COL7A1-202ENST00000422991 PRKG2Q13237 762 aa16.53■□□□□ 0.24
COL7A1-202ENST00000422991 SP140Q13342 867 aa16.53■□□□□ 0.24
COL7A1-202ENST00000422991 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.53■□□□□ 0.24
COL7A1-202ENST00000422991 LRIG3Q6UXM1 1119 aa16.53■□□□□ 0.24
COL7A1-202ENST00000422991 SPRED1Q7Z699 444 aa16.53■□□□□ 0.24
COL7A1-202ENST00000422991 TBC1D1Q86TI0 1168 aaPredicted RBP16.53■□□□□ 0.24
COL7A1-202ENST00000422991 CENPLQ8N0S6 344 aaPredicted RBP16.53■□□□□ 0.24
COL7A1-202ENST00000422991 CYP4X1Q8N118 509 aa16.53■□□□□ 0.24
COL7A1-202ENST00000422991 FBXO15Q8NCQ5 510 aaPredicted RBP16.53■□□□□ 0.24
COL7A1-202ENST00000422991 ANKRD7Q92527 254 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms