RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.65□□□□□ -1.02
TRIM39-206ENST00000420746 SECISBP2Q96T21 854 aaKnown RBP8.65□□□□□ -1.02
TRIM39-206ENST00000420746 TRIM51Q9BSJ1 452 aa8.65□□□□□ -1.02
TRIM39-206ENST00000420746 SARGQ9BW04 601 aa8.65□□□□□ -1.02
TRIM39-206ENST00000420746 UCK2Q9BZX2 261 aa8.65□□□□□ -1.02
TRIM39-206ENST00000420746 DTLQ9NZJ0 730 aa8.65□□□□□ -1.02
TRIM39-206ENST00000420746 DNAJC12Q9UKB3 198 aa8.65□□□□□ -1.02
TRIM39-206ENST00000420746 RNF6Q9Y252 685 aa8.65□□□□□ -1.02
TRIM39-206ENST00000420746 LUC7L2Q9Y383 392 aaKnown RBP8.65□□□□□ -1.02
TRIM39-206ENST00000420746 COLEC10Q9Y6Z7 277 aa8.65□□□□□ -1.02
TRIM39-206ENST00000420746 TLN2Q9Y4G6 2542 aa8.65□□□□□ -1.02
TRIM39-206ENST00000420746 A0A1B0GX78 115 aa8.64□□□□□ -1.03
TRIM39-206ENST00000420746 BICDL2A1A5D9 508 aa8.64□□□□□ -1.03
TRIM39-206ENST00000420746 KLHL33A6NCF5 533 aa8.64□□□□□ -1.03
TRIM39-206ENST00000420746 NPIPA5E9PKD4 350 aa8.64□□□□□ -1.03
TRIM39-206ENST00000420746 FAM227AF5H4B4 570 aa8.64□□□□□ -1.03
TRIM39-206ENST00000420746 TTI1O43156 1089 aa8.64□□□□□ -1.03
TRIM39-206ENST00000420746 DAPK3O43293 454 aa8.64□□□□□ -1.03
TRIM39-206ENST00000420746 MAFKO60675 156 aa8.64□□□□□ -1.03
TRIM39-206ENST00000420746 MTX2O75431 263 aa8.64□□□□□ -1.03
TRIM39-206ENST00000420746 PNMA6AP0CW24 399 aaPredicted RBP8.64□□□□□ -1.03
TRIM39-206ENST00000420746 PON1P27169 355 aa8.64□□□□□ -1.03
TRIM39-206ENST00000420746 HCAR3P49019 387 aa8.64□□□□□ -1.03
TRIM39-206ENST00000420746 ARSFP54793 590 aa8.64□□□□□ -1.03
TRIM39-206ENST00000420746 CDH6P55285 790 aa8.64□□□□□ -1.03
TRIM39-206ENST00000420746 NKX6-1P78426 367 aaPredicted RBP8.64□□□□□ -1.03
TRIM39-206ENST00000420746 APBA1Q02410 837 aa8.64□□□□□ -1.03
TRIM39-206ENST00000420746 TMEM115Q12893 351 aaPredicted RBP8.64□□□□□ -1.03
TRIM39-206ENST00000420746 FOXD4L6Q3SYB3 417 aaPredicted RBP8.64□□□□□ -1.03
TRIM39-206ENST00000420746 ATP13A4Q4VNC1 1196 aa8.64□□□□□ -1.03
TRIM39-206ENST00000420746 KHDC1Q4VXA5 237 aaKnown RBP8.64□□□□□ -1.03
TRIM39-206ENST00000420746 TAF3Q5VWG9 929 aa8.64□□□□□ -1.03
TRIM39-206ENST00000420746 PODNL1Q6PEZ8 512 aa8.64□□□□□ -1.03
TRIM39-206ENST00000420746 WDR59Q6PJI9 974 aa8.64□□□□□ -1.03
TRIM39-206ENST00000420746 FOXD4L3Q6VB84 417 aaPredicted RBP8.64□□□□□ -1.03
TRIM39-206ENST00000420746 C3P1Q6ZMU1 363 aa8.64□□□□□ -1.03
TRIM39-206ENST00000420746 CHSY3Q70JA7 882 aa8.64□□□□□ -1.03
TRIM39-206ENST00000420746 ZNF677Q86XU0 584 aa8.64□□□□□ -1.03
TRIM39-206ENST00000420746 MARVELD2Q8N4S9 558 aa8.64□□□□□ -1.03
TRIM39-206ENST00000420746 TEX26Q8N6G2 289 aa8.64□□□□□ -1.03
TRIM39-206ENST00000420746 ZNF655Q8N720 491 aaPredicted RBP8.64□□□□□ -1.03
TRIM39-206ENST00000420746 C19orf47Q8N9M1 422 aaKnown RBP8.64□□□□□ -1.03
TRIM39-206ENST00000420746 GPR26Q8NDV2 337 aa8.64□□□□□ -1.03
TRIM39-206ENST00000420746 ACVR1CQ8NER5 493 aa8.64□□□□□ -1.03
TRIM39-206ENST00000420746 OR4E2Q8NGC2 313 aa8.64□□□□□ -1.03
TRIM39-206ENST00000420746 SLC20A1Q8WUM9 679 aa8.64□□□□□ -1.03
TRIM39-206ENST00000420746 RND1Q92730 232 aa8.64□□□□□ -1.03
TRIM39-206ENST00000420746 C12orf66Q96MD2 445 aa8.64□□□□□ -1.03
TRIM39-206ENST00000420746 INSM2Q96T92 566 aaPredicted RBP8.64□□□□□ -1.03
TRIM39-206ENST00000420746 POLR1EQ9GZS1 481 aaKnown RBP8.64□□□□□ -1.03
TRIM39-206ENST00000420746 SPRTNQ9H040 489 aaPredicted RBP8.64□□□□□ -1.03
TRIM39-206ENST00000420746 SRMSQ9H3Y6 488 aa8.64□□□□□ -1.03
TRIM39-206ENST00000420746 BEX4Q9NWD9 120 aaPredicted RBP8.64□□□□□ -1.03
TRIM39-206ENST00000420746 NPIPA1Q9UND3 350 aa8.64□□□□□ -1.03
TRIM39-206ENST00000420746 PSMD13Q9UNM6 376 aa8.64□□□□□ -1.03
TRIM39-206ENST00000420746 AP4E1Q9UPM8 1137 aa8.64□□□□□ -1.03
TRIM39-206ENST00000420746 CHKBQ9Y259 395 aa8.64□□□□□ -1.03
TRIM39-206ENST00000420746 ASB1Q9Y576 335 aa8.64□□□□□ -1.03
TRIM39-206ENST00000420746 HEBP2Q9Y5Z4 205 aa8.64□□□□□ -1.03
TRIM39-206ENST00000420746 CFAP20Q9Y6A4 193 aaKnown RBP8.64□□□□□ -1.03
TRIM39-206ENST00000420746 GTF3C1Q12789 2109 aa8.63□□□□□ -1.03
TRIM39-206ENST00000420746 CCDC88CQ9P219 2028 aa8.63□□□□□ -1.03
TRIM39-206ENST00000420746 NSG1A0A0A6YYJ2 146 aa8.63□□□□□ -1.03
TRIM39-206ENST00000420746 C2orf74A8MZ97 194 aa8.63□□□□□ -1.03
TRIM39-206ENST00000420746 ARHGEF9O43307 516 aa8.63□□□□□ -1.03
TRIM39-206ENST00000420746 POP7O75817 140 aaKnown RBP8.63□□□□□ -1.03
TRIM39-206ENST00000420746 WFS1O76024 890 aa8.63□□□□□ -1.03
TRIM39-206ENST00000420746 F13A1P00488 732 aa8.63□□□□□ -1.03
TRIM39-206ENST00000420746 CYP1A1P04798 512 aaPredicted RBP8.63□□□□□ -1.03
TRIM39-206ENST00000420746 DESP17661 470 aa8.63□□□□□ -1.03
TRIM39-206ENST00000420746 NSG1P42857 185 aa8.63□□□□□ -1.03
TRIM39-206ENST00000420746 RAB28P51157 221 aa8.63□□□□□ -1.03
TRIM39-206ENST00000420746 OLIG2Q13516 323 aa8.63□□□□□ -1.03
TRIM39-206ENST00000420746 NFE2L1Q14494 772 aa8.63□□□□□ -1.03
TRIM39-206ENST00000420746 SYCP1Q15431 976 aa8.63□□□□□ -1.03
TRIM39-206ENST00000420746 ABHD17BQ5VST6 288 aa8.63□□□□□ -1.03
TRIM39-206ENST00000420746 ALS2CLQ60I27 953 aa8.63□□□□□ -1.03
TRIM39-206ENST00000420746 FAM83HQ6ZRV2 1179 aaPredicted RBP8.63□□□□□ -1.03
TRIM39-206ENST00000420746 CEP128Q6ZU80 1094 aa8.63□□□□□ -1.03
TRIM39-206ENST00000420746 COX15Q7KZN9 410 aa8.63□□□□□ -1.03
TRIM39-206ENST00000420746 NDUFAF7Q7L592 441 aa8.63□□□□□ -1.03
TRIM39-206ENST00000420746 NOP9Q86U38 636 aaKnown RBP8.63□□□□□ -1.03
TRIM39-206ENST00000420746 PAQR7Q86WK9 346 aa8.63□□□□□ -1.03
TRIM39-206ENST00000420746 ZZZ3Q8IYH5 903 aa8.63□□□□□ -1.03
TRIM39-206ENST00000420746 SIRT6Q8N6T7 355 aa8.63□□□□□ -1.03
TRIM39-206ENST00000420746 LPCAT1Q8NF37 534 aa8.63□□□□□ -1.03
TRIM39-206ENST00000420746 EID2BQ96D98 161 aa8.63□□□□□ -1.03
TRIM39-206ENST00000420746 FRMD6Q96NE9 622 aa8.63□□□□□ -1.03
TRIM39-206ENST00000420746 TUBGCP2Q9BSJ2 902 aa8.63□□□□□ -1.03
TRIM39-206ENST00000420746 CNPY3Q9BT09 278 aa8.63□□□□□ -1.03
TRIM39-206ENST00000420746 BDH2Q9BUT1 245 aa8.63□□□□□ -1.03
TRIM39-206ENST00000420746 SELENOOQ9BVL4 669 aa8.63□□□□□ -1.03
TRIM39-206ENST00000420746 ZCCHC2Q9C0B9 1178 aaKnown RBP8.63□□□□□ -1.03
TRIM39-206ENST00000420746 SOX17Q9H6I2 414 aaPredicted RBP8.63□□□□□ -1.03
TRIM39-206ENST00000420746 ZFYVE1Q9HBF4 777 aa8.63□□□□□ -1.03
TRIM39-206ENST00000420746 PCDH9Q9HC56 1237 aa8.63□□□□□ -1.03
TRIM39-206ENST00000420746 FAM60AQ9NP50 221 aa8.63□□□□□ -1.03
TRIM39-206ENST00000420746 SIX2Q9NPC8 291 aa8.63□□□□□ -1.03
TRIM39-206ENST00000420746 IL1RAPL1Q9NZN1 696 aa8.63□□□□□ -1.03
TRIM39-206ENST00000420746 TEKT2Q9UIF3 430 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms