RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 ESPL1Q14674 2120 aa14.36□□□□□ -0.11
RPS28-201ENST00000417088 PRRC2CQ9Y520 2896 aaKnown RBP14.36□□□□□ -0.11
RPS28-201ENST00000417088 C2orf74A8MZ97 194 aa14.35□□□□□ -0.11
RPS28-201ENST00000417088 E7EQ34 232 aa14.35□□□□□ -0.11
RPS28-201ENST00000417088 ZNF185O15231 689 aa14.35□□□□□ -0.11
RPS28-201ENST00000417088 ZNF749O43361 778 aa14.35□□□□□ -0.11
RPS28-201ENST00000417088 AGFG2O95081 481 aa14.35□□□□□ -0.11
RPS28-201ENST00000417088 TPH1P17752 444 aa14.35□□□□□ -0.11
RPS28-201ENST00000417088 NCF4Q15080 339 aa14.35□□□□□ -0.11
RPS28-201ENST00000417088 INPP5JQ15735 1006 aaPredicted RBP14.35□□□□□ -0.11
RPS28-201ENST00000417088 FHL5Q5TD97 284 aa14.35□□□□□ -0.11
RPS28-201ENST00000417088 ZNF385CQ66K41 422 aaPredicted RBP14.35□□□□□ -0.11
RPS28-201ENST00000417088 KCTD11Q693B1 232 aa14.35□□□□□ -0.11
RPS28-201ENST00000417088 JMJD6Q6NYC1 403 aaPredicted RBP14.35□□□□□ -0.11
RPS28-201ENST00000417088 ZNF449Q6P9G9 518 aa14.35□□□□□ -0.11
RPS28-201ENST00000417088 CDHR3Q6ZTQ4 885 aa14.35□□□□□ -0.11
RPS28-201ENST00000417088 MED25Q71SY5 747 aa14.35□□□□□ -0.11
RPS28-201ENST00000417088 TAS2R42Q7RTR8 314 aa14.35□□□□□ -0.11
RPS28-201ENST00000417088 PIANPQ8IYJ0 282 aa14.35□□□□□ -0.11
RPS28-201ENST00000417088 TMEM102Q8N9M5 508 aaPredicted RBP14.35□□□□□ -0.11
RPS28-201ENST00000417088 Q8NA96 180 aa14.35□□□□□ -0.11
RPS28-201ENST00000417088 GLIS1Q8NBF1 620 aa14.35□□□□□ -0.11
RPS28-201ENST00000417088 ALG3Q92685 438 aa14.35□□□□□ -0.11
RPS28-201ENST00000417088 HGH1Q9BTY7 390 aa14.35□□□□□ -0.11
RPS28-201ENST00000417088 SLC7A5P2Q9GIP4 190 aa14.35□□□□□ -0.11
RPS28-201ENST00000417088 VPS37BQ9H9H4 285 aa14.35□□□□□ -0.11
RPS28-201ENST00000417088 FAM60AQ9NP50 221 aa14.35□□□□□ -0.11
RPS28-201ENST00000417088 LUC7LQ9NQ29 371 aaKnown RBP14.35□□□□□ -0.11
RPS28-201ENST00000417088 NLE1Q9NVX2 485 aaPredicted RBP14.35□□□□□ -0.11
RPS28-201ENST00000417088 ACTR10Q9NZ32 417 aa14.35□□□□□ -0.11
RPS28-201ENST00000417088 DUSP10Q9Y6W6 482 aa14.35□□□□□ -0.11
RPS28-201ENST00000417088 TEX15Q9BXT5 2789 aa14.35□□□□□ -0.11
RPS28-201ENST00000417088 A6NL46 340 aa14.34□□□□□ -0.11
RPS28-201ENST00000417088 MAP3K7O43318 606 aa14.34□□□□□ -0.11
RPS28-201ENST00000417088 DPM1O60762 260 aa14.34□□□□□ -0.11
RPS28-201ENST00000417088 CYLC1P35663 651 aaPredicted RBP14.34□□□□□ -0.11
RPS28-201ENST00000417088 RWDD2BP57060 319 aa14.34□□□□□ -0.11
RPS28-201ENST00000417088 ATP1A4Q13733 1029 aa14.34□□□□□ -0.11
RPS28-201ENST00000417088 DBN1Q16643 649 aa14.34□□□□□ -0.11
RPS28-201ENST00000417088 C4orf17Q53FE4 359 aa14.34□□□□□ -0.11
RPS28-201ENST00000417088 PRR30Q53SZ7 412 aaPredicted RBP14.34□□□□□ -0.11
RPS28-201ENST00000417088 HIST2H2BCQ6DN03 193 aa14.34□□□□□ -0.11
RPS28-201ENST00000417088 SPESP1Q6UW49 350 aa14.34□□□□□ -0.11
RPS28-201ENST00000417088 RBMXL3Q8N7X1 1067 aaKnown RBP14.34□□□□□ -0.11
RPS28-201ENST00000417088 CDKN2AIPNLQ96HQ2 116 aa14.34□□□□□ -0.11
RPS28-201ENST00000417088 DPH2Q9BQC3 489 aaPredicted RBP14.34□□□□□ -0.11
RPS28-201ENST00000417088 MFRPQ9BY79 579 aa14.34□□□□□ -0.11
RPS28-201ENST00000417088 LUZP4Q9P127 313 aa14.34□□□□□ -0.11
RPS28-201ENST00000417088 ICKQ9UPZ9 632 aa14.34□□□□□ -0.11
RPS28-201ENST00000417088 PCSK5Q92824 1860 aa14.33□□□□□ -0.11
RPS28-201ENST00000417088 UNC79Q9P2D8 2635 aa14.33□□□□□ -0.11
RPS28-201ENST00000417088 C9J4A7 227 aa14.33□□□□□ -0.12
RPS28-201ENST00000417088 H3BMH7 237 aa14.33□□□□□ -0.12
RPS28-201ENST00000417088 AP2A2O94973 939 aa14.33□□□□□ -0.12
RPS28-201ENST00000417088 TJP3O95049 919 aa14.33□□□□□ -0.12
RPS28-201ENST00000417088 METTL18O95568 372 aa14.33□□□□□ -0.12
RPS28-201ENST00000417088 HBQ1P09105 142 aa14.33□□□□□ -0.12
RPS28-201ENST00000417088 GSTM1P09488 218 aa14.33□□□□□ -0.12
RPS28-201ENST00000417088 CETN2P41208 172 aa14.33□□□□□ -0.12
RPS28-201ENST00000417088 GABRA4P48169 554 aa14.33□□□□□ -0.12
RPS28-201ENST00000417088 GSTM4Q03013 218 aa14.33□□□□□ -0.12
RPS28-201ENST00000417088 CACNG1Q06432 222 aa14.33□□□□□ -0.12
RPS28-201ENST00000417088 ZIC1Q15915 447 aa14.33□□□□□ -0.12
RPS28-201ENST00000417088 PARP6Q2NL67 630 aa14.33□□□□□ -0.12
RPS28-201ENST00000417088 SLC6A19Q695T7 634 aa14.33□□□□□ -0.12
RPS28-201ENST00000417088 UNC5AQ6ZN44 842 aa14.33□□□□□ -0.12
RPS28-201ENST00000417088 TRIM73Q86UV7 250 aa14.33□□□□□ -0.12
RPS28-201ENST00000417088 HPS6Q86YV9 775 aa14.33□□□□□ -0.12
RPS28-201ENST00000417088 C19orf47Q8N9M1 422 aaKnown RBP14.33□□□□□ -0.12
RPS28-201ENST00000417088 OR5AR1Q8NGP9 310 aa14.33□□□□□ -0.12
RPS28-201ENST00000417088 STYXQ8WUJ0 223 aa14.33□□□□□ -0.12
RPS28-201ENST00000417088 LRRC45Q96CN5 670 aa14.33□□□□□ -0.12
RPS28-201ENST00000417088 CALR3Q96L12 384 aaKnown RBP14.33□□□□□ -0.12
RPS28-201ENST00000417088 SMAD5Q99717 465 aaKnown RBP14.33□□□□□ -0.12
RPS28-201ENST00000417088 DHRS4Q9BTZ2 278 aa14.33□□□□□ -0.12
RPS28-201ENST00000417088 TRIM5Q9C035 493 aa14.33□□□□□ -0.12
RPS28-201ENST00000417088 SLAMF7Q9NQ25 335 aa14.33□□□□□ -0.12
RPS28-201ENST00000417088 GPR83Q9NYM4 423 aa14.33□□□□□ -0.12
RPS28-201ENST00000417088 SMARCAL1Q9NZC9 954 aa14.33□□□□□ -0.12
RPS28-201ENST00000417088 PLEKHB1Q9UF11 243 aaPredicted RBP14.33□□□□□ -0.12
RPS28-201ENST00000417088 G3BP2Q9UN86 482 aaKnown RBP14.33□□□□□ -0.12
RPS28-201ENST00000417088 EPN1Q9Y6I3 576 aaPredicted RBP14.33□□□□□ -0.12
RPS28-201ENST00000417088 PRSS21Q9Y6M0 314 aa14.33□□□□□ -0.12
RPS28-201ENST00000417088 PIKFYVEQ9Y2I7 2098 aa14.32□□□□□ -0.12
RPS28-201ENST00000417088 SOWAHDA6NJG2 315 aa14.32□□□□□ -0.12
RPS28-201ENST00000417088 TCP11X1B4DZS4 312 aa14.32□□□□□ -0.12
RPS28-201ENST00000417088 HCRTR1O43613 425 aa14.32□□□□□ -0.12
RPS28-201ENST00000417088 SEMA7AO75326 666 aa14.32□□□□□ -0.12
RPS28-201ENST00000417088 ZNF189O75820 626 aaPredicted RBP14.32□□□□□ -0.12
RPS28-201ENST00000417088 KLF7O75840 302 aaPredicted RBP14.32□□□□□ -0.12
RPS28-201ENST00000417088 TPBGLP0DKB5 382 aa14.32□□□□□ -0.12
RPS28-201ENST00000417088 CBSLP0DN79 551 aa14.32□□□□□ -0.12
RPS28-201ENST00000417088 UGT2B7P16662 529 aa14.32□□□□□ -0.12
RPS28-201ENST00000417088 AGXTP21549 392 aa14.32□□□□□ -0.12
RPS28-201ENST00000417088 PSMA3P25788 255 aa14.32□□□□□ -0.12
RPS28-201ENST00000417088 ACADLP28330 430 aa14.32□□□□□ -0.12
RPS28-201ENST00000417088 OTX2P32243 289 aa14.32□□□□□ -0.12
RPS28-201ENST00000417088 CBSP35520 551 aa14.32□□□□□ -0.12
RPS28-201ENST00000417088 RRADP55042 308 aa14.32□□□□□ -0.12
RPS28-201ENST00000417088 NAP1L1P55209 391 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms