RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 FTH1P02794 183 aa17.33■□□□□ 0.36
CPNE1-210ENST00000416778 CCDC175P0C221 793 aa17.33■□□□□ 0.36
CPNE1-210ENST00000416778 OR56A5P0C7T3 313 aa17.33■□□□□ 0.36
CPNE1-210ENST00000416778 MSL3P1P0C860 447 aa17.33■□□□□ 0.36
CPNE1-210ENST00000416778 ST6GAL1P15907 406 aa17.33■□□□□ 0.36
CPNE1-210ENST00000416778 PLOD1Q02809 727 aaPredicted RBP17.33■□□□□ 0.36
CPNE1-210ENST00000416778 SEMA3AQ14563 771 aa17.33■□□□□ 0.36
CPNE1-210ENST00000416778 PCID2Q5JVF3 399 aa17.33■□□□□ 0.36
CPNE1-210ENST00000416778 PRAMEF17Q5VTA0 474 aa17.33■□□□□ 0.36
CPNE1-210ENST00000416778 UNC5AQ6ZN44 842 aa17.33■□□□□ 0.36
CPNE1-210ENST00000416778 ATG14Q6ZNE5 492 aa17.33■□□□□ 0.36
CPNE1-210ENST00000416778 PRICKLE2Q7Z3G6 844 aa17.33■□□□□ 0.36
CPNE1-210ENST00000416778 OR5AR1Q8NGP9 310 aa17.33■□□□□ 0.36
CPNE1-210ENST00000416778 OR6P1Q8NGX9 317 aa17.33■□□□□ 0.36
CPNE1-210ENST00000416778 PEX13Q92968 403 aa17.33■□□□□ 0.36
CPNE1-210ENST00000416778 ABHD17AQ96GS6 310 aa17.33■□□□□ 0.36
CPNE1-210ENST00000416778 RUFY1Q96T51 708 aa17.33■□□□□ 0.36
CPNE1-210ENST00000416778 TTC1Q99614 292 aa17.33■□□□□ 0.36
CPNE1-210ENST00000416778 TWSG1Q9GZX9 223 aa17.33■□□□□ 0.36
CPNE1-210ENST00000416778 SYTL2Q9HCH5 934 aa17.33■□□□□ 0.36
CPNE1-210ENST00000416778 ZKSCAN5Q9Y2L8 839 aa17.33■□□□□ 0.36
CPNE1-210ENST00000416778 SETXQ7Z333 2677 aaKnown RBP17.33■□□□□ 0.36
CPNE1-210ENST00000416778 GSAPA4D1B5 854 aa17.32■□□□□ 0.36
CPNE1-210ENST00000416778 FGGP02679 453 aa17.32■□□□□ 0.36
CPNE1-210ENST00000416778 CCR7P32248 378 aa17.32■□□□□ 0.36
CPNE1-210ENST00000416778 KCNJ1P48048 391 aa17.32■□□□□ 0.36
CPNE1-210ENST00000416778 PLEKHS1Q5SXH7 462 aa17.32■□□□□ 0.36
CPNE1-210ENST00000416778 AFTPHQ6ULP2 937 aa17.32■□□□□ 0.36
CPNE1-210ENST00000416778 C4orf22Q6V702 233 aa17.32■□□□□ 0.36
CPNE1-210ENST00000416778 TMEM135Q86UB9 458 aa17.32■□□□□ 0.36
CPNE1-210ENST00000416778 PTRH1Q86Y79 214 aaKnown RBP17.32■□□□□ 0.36
CPNE1-210ENST00000416778 TMEM126BQ8IUX1 230 aa17.32■□□□□ 0.36
CPNE1-210ENST00000416778 TBC1D21Q8IYX1 336 aa17.32■□□□□ 0.36
CPNE1-210ENST00000416778 OR1L3Q8NH93 324 aa17.32■□□□□ 0.36
CPNE1-210ENST00000416778 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.32■□□□□ 0.362e-6■■■■■ 26.8
CPNE1-210ENST00000416778 LRFN5Q96NI6 719 aa17.32■□□□□ 0.36
CPNE1-210ENST00000416778 HGH1Q9BTY7 390 aa17.32■□□□□ 0.36
CPNE1-210ENST00000416778 CARD6Q9BX69 1037 aa17.32■□□□□ 0.36
CPNE1-210ENST00000416778 SOHLH2Q9NX45 425 aa17.32■□□□□ 0.36
CPNE1-210ENST00000416778 ACTR10Q9NZ32 417 aa17.32■□□□□ 0.36
CPNE1-210ENST00000416778 POLG2Q9UHN1 485 aa17.32■□□□□ 0.36
CPNE1-210ENST00000416778 ICKQ9UPZ9 632 aa17.32■□□□□ 0.36
CPNE1-210ENST00000416778 FARSAQ9Y285 508 aaKnown RBP17.32■□□□□ 0.36
CPNE1-210ENST00000416778 ASF1AQ9Y294 204 aa17.32■□□□□ 0.36
CPNE1-210ENST00000416778 C2orf74A8MZ97 194 aa17.31■□□□□ 0.36
CPNE1-210ENST00000416778 CPNE3O75131 537 aaKnown RBP17.31■□□□□ 0.36
CPNE1-210ENST00000416778 WISP1O95388 367 aa17.31■□□□□ 0.36
CPNE1-210ENST00000416778 PTPN4P29074 926 aa17.31■□□□□ 0.36
CPNE1-210ENST00000416778 NPY2RP49146 381 aa17.31■□□□□ 0.36
CPNE1-210ENST00000416778 CCZ1BP86790 482 aa17.31■□□□□ 0.36
CPNE1-210ENST00000416778 CCZ1P86791 482 aaPredicted RBP17.31■□□□□ 0.36
CPNE1-210ENST00000416778 KCNC4Q03721 635 aa17.31■□□□□ 0.36
CPNE1-210ENST00000416778 GPS2Q13227 327 aa17.31■□□□□ 0.36
CPNE1-210ENST00000416778 FASTKD1Q53R41 847 aaKnown RBP17.31■□□□□ 0.36
CPNE1-210ENST00000416778 ZNF789Q5FWF6 425 aa17.31■□□□□ 0.36
CPNE1-210ENST00000416778 LCN10Q6JVE6 187 aa17.31■□□□□ 0.36
CPNE1-210ENST00000416778 LDB1Q86U70 411 aaPredicted RBP17.31■□□□□ 0.36
CPNE1-210ENST00000416778 OR5K2Q8NHB8 316 aa17.31■□□□□ 0.36
CPNE1-210ENST00000416778 FLVCR1-AS1Q8TAF5 88 aa17.31■□□□□ 0.36
CPNE1-210ENST00000416778 MAIP1Q8WWC4 291 aa17.31■□□□□ 0.36
CPNE1-210ENST00000416778 OR2A14Q96R47 310 aa17.31■□□□□ 0.36
CPNE1-210ENST00000416778 ACTL8Q9H568 366 aa17.31■□□□□ 0.36
CPNE1-210ENST00000416778 ZNF71Q9NQZ8 489 aaPredicted RBP17.31■□□□□ 0.36
CPNE1-210ENST00000416778 EIF2B3Q9NR50 452 aaKnown RBP17.31■□□□□ 0.36
CPNE1-210ENST00000416778 SERTAD3Q9UJW9 196 aa17.31■□□□□ 0.36
CPNE1-210ENST00000416778 CDYLQ9Y232 598 aa17.31■□□□□ 0.36
CPNE1-210ENST00000416778 POLHQ9Y253 713 aa17.31■□□□□ 0.36
CPNE1-210ENST00000416778 ASH1LQ9NR48 2969 aaKnown RBP17.3■□□□□ 0.36
CPNE1-210ENST00000416778 CDC14CA4D256 554 aa17.3■□□□□ 0.36
CPNE1-210ENST00000416778 MEN1O00255 615 aa17.3■□□□□ 0.36
CPNE1-210ENST00000416778 CEP104O60308 925 aa17.3■□□□□ 0.36
CPNE1-210ENST00000416778 GPC4O75487 556 aa17.3■□□□□ 0.36
CPNE1-210ENST00000416778 PVRP15151 417 aa17.3■□□□□ 0.36
CPNE1-210ENST00000416778 SESN2P58004 480 aaPredicted RBP17.3■□□□□ 0.36
CPNE1-210ENST00000416778 PRAMEP78395 509 aa17.3■□□□□ 0.36
CPNE1-210ENST00000416778 ABRQ12979 859 aa17.3■□□□□ 0.36
CPNE1-210ENST00000416778 VRK3Q8IV63 474 aa17.3■□□□□ 0.36
CPNE1-210ENST00000416778 PPHLN1Q8NEY8 458 aaKnown RBP17.3■□□□□ 0.36
CPNE1-210ENST00000416778 TRIM58Q8NG06 486 aa17.3■□□□□ 0.36
CPNE1-210ENST00000416778 MR1Q95460 341 aa17.3■□□□□ 0.36
CPNE1-210ENST00000416778 AP1M1Q9BXS5 423 aa17.3■□□□□ 0.36
CPNE1-210ENST00000416778 KLHL25Q9H0H3 589 aa17.3■□□□□ 0.36
CPNE1-210ENST00000416778 CHST8Q9H2A9 424 aa17.3■□□□□ 0.36
CPNE1-210ENST00000416778 TREX1Q9NSU2 369 aa17.3■□□□□ 0.36
CPNE1-210ENST00000416778 SPHK1Q9NYA1 384 aa17.3■□□□□ 0.36
CPNE1-210ENST00000416778 MARCH4Q9P2E8 410 aaPredicted RBP17.3■□□□□ 0.36
CPNE1-210ENST00000416778 SPTBP11277 2137 aa17.3■□□□□ 0.36
CPNE1-210ENST00000416778 PIKFYVEQ9Y2I7 2098 aa17.29■□□□□ 0.36
CPNE1-210ENST00000416778 IQCF5A8MTL0 148 aa17.29■□□□□ 0.36
CPNE1-210ENST00000416778 TMEM150CB9EJG8 249 aa17.29■□□□□ 0.36
CPNE1-210ENST00000416778 CD3EAPO15446 510 aaKnown RBP17.29■□□□□ 0.36
CPNE1-210ENST00000416778 KLK3P07288 261 aaPredicted RBP17.29■□□□□ 0.36
CPNE1-210ENST00000416778 CHRM5P08912 532 aaPredicted RBP17.29■□□□□ 0.36
CPNE1-210ENST00000416778 CXCR5P32302 372 aa17.29■□□□□ 0.36
CPNE1-210ENST00000416778 SHMT2P34897 504 aa17.29■□□□□ 0.36
CPNE1-210ENST00000416778 RORAP35398 523 aa17.29■□□□□ 0.36
CPNE1-210ENST00000416778 PPARGP37231 505 aaPredicted RBP17.29■□□□□ 0.36
CPNE1-210ENST00000416778 RPS15P62841 145 aaKnown RBP17.29■□□□□ 0.36
CPNE1-210ENST00000416778 CRADDP78560 199 aa17.29■□□□□ 0.36
CPNE1-210ENST00000416778 ZIC1Q15915 447 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms