RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 CBSLP0DN79 551 aa18.71■□□□□ 0.59
UBXN4-202ENST00000415164 VARSP26640 1264 aaKnown RBP18.71■□□□□ 0.59
UBXN4-202ENST00000415164 CBSP35520 551 aa18.71■□□□□ 0.59
UBXN4-202ENST00000415164 HADHAP40939 763 aa18.71■□□□□ 0.59
UBXN4-202ENST00000415164 MAGEA1P43355 309 aa18.71■□□□□ 0.59
UBXN4-202ENST00000415164 CDKN1CP49918 316 aaPredicted RBP18.71■□□□□ 0.59
UBXN4-202ENST00000415164 BRD3Q15059 726 aa18.71■□□□□ 0.59
UBXN4-202ENST00000415164 ANKRD20A2Q5SQ80 823 aa18.71■□□□□ 0.59
UBXN4-202ENST00000415164 VWA5B1Q5TIE3 1220 aa18.71■□□□□ 0.59
UBXN4-202ENST00000415164 ANKRD20A1Q5TYW2 823 aa18.71■□□□□ 0.59
UBXN4-202ENST00000415164 ANKRD20A3Q5VUR7 823 aa18.71■□□□□ 0.59
UBXN4-202ENST00000415164 BBS12Q6ZW61 710 aa18.71■□□□□ 0.59
UBXN4-202ENST00000415164 MRGPREQ86SM8 312 aa18.71■□□□□ 0.59
UBXN4-202ENST00000415164 VSTM4Q8IW00 320 aa18.71■□□□□ 0.59
UBXN4-202ENST00000415164 CLEC1AQ8NC01 280 aa18.71■□□□□ 0.59
UBXN4-202ENST00000415164 KRT35Q92764 455 aa18.71■□□□□ 0.59
UBXN4-202ENST00000415164 TBL1YQ9BQ87 522 aa18.71■□□□□ 0.59
UBXN4-202ENST00000415164 OR52A5Q9H2C5 316 aa18.71■□□□□ 0.59
UBXN4-202ENST00000415164 NDOR1Q9UHB4 597 aa18.71■□□□□ 0.59
UBXN4-202ENST00000415164 INTUQ9ULD6 942 aa18.71■□□□□ 0.59
UBXN4-202ENST00000415164 TFR2Q9UP52 801 aa18.71■□□□□ 0.59
UBXN4-202ENST00000415164 MED13Q9UHV7 2174 aa18.71■□□□□ 0.59
UBXN4-202ENST00000415164 APOC4-APOC2K7ER74 178 aa18.7■□□□□ 0.58
UBXN4-202ENST00000415164 OR2B3O76000 313 aa18.7■□□□□ 0.58
UBXN4-202ENST00000415164 APOC2P02655 101 aa18.7■□□□□ 0.58
UBXN4-202ENST00000415164 PRSS56P0CW18 603 aa18.7■□□□□ 0.58
UBXN4-202ENST00000415164 FOLR3P41439 243 aa18.7■□□□□ 0.58
UBXN4-202ENST00000415164 ZNF140P52738 457 aaPredicted RBP18.7■□□□□ 0.58
UBXN4-202ENST00000415164 OTUD4Q01804 1114 aaKnown RBP18.7■□□□□ 0.58
UBXN4-202ENST00000415164 ELOAQ14241 798 aaKnown RBP18.7■□□□□ 0.58
UBXN4-202ENST00000415164 PLEKHN1Q494U1 663 aaPredicted RBP18.7■□□□□ 0.58
UBXN4-202ENST00000415164 LYPLAL1Q5VWZ2 237 aa18.7■□□□□ 0.58
UBXN4-202ENST00000415164 DARS2Q6PI48 645 aaKnown RBP18.7■□□□□ 0.58
UBXN4-202ENST00000415164 SPESP1Q6UW49 350 aa18.7■□□□□ 0.58
UBXN4-202ENST00000415164 RANBP10Q6VN20 620 aa18.7■□□□□ 0.58
UBXN4-202ENST00000415164 CDKL3Q8IVW4 592 aaPredicted RBP18.7■□□□□ 0.58
UBXN4-202ENST00000415164 C19orf47Q8N9M1 422 aaKnown RBP18.7■□□□□ 0.58
UBXN4-202ENST00000415164 CCDC110Q8TBZ0 833 aa18.7■□□□□ 0.58
UBXN4-202ENST00000415164 HEXDCQ8WVB3 486 aa18.7■□□□□ 0.58
UBXN4-202ENST00000415164 TFGQ92734 400 aaPredicted RBP18.7■□□□□ 0.58
UBXN4-202ENST00000415164 LRRC45Q96CN5 670 aa18.7■□□□□ 0.58
UBXN4-202ENST00000415164 SNRNP40Q96DI7 357 aaKnown RBP18.7■□□□□ 0.58
UBXN4-202ENST00000415164 DNAJC1Q96KC8 554 aaKnown RBP18.7■□□□□ 0.58
UBXN4-202ENST00000415164 FER1L6-AS2Q96M78 137 aa18.7■□□□□ 0.58
UBXN4-202ENST00000415164 SMAD5Q99717 465 aaKnown RBP18.7■□□□□ 0.58
UBXN4-202ENST00000415164 DPH2Q9BQC3 489 aaPredicted RBP18.7■□□□□ 0.58
UBXN4-202ENST00000415164 PITPNM3Q9BZ71 974 aa18.7■□□□□ 0.58
UBXN4-202ENST00000415164 SPRTNQ9H040 489 aaPredicted RBP18.7■□□□□ 0.58
UBXN4-202ENST00000415164 TFB2MQ9H5Q4 396 aaKnown RBP18.7■□□□□ 0.58
UBXN4-202ENST00000415164 MVB12BQ9H7P6 319 aa18.7■□□□□ 0.58
UBXN4-202ENST00000415164 ASF1BQ9NVP2 202 aa18.7■□□□□ 0.58
UBXN4-202ENST00000415164 ZDHHC3Q9NYG2 299 aa18.7■□□□□ 0.58
UBXN4-202ENST00000415164 IFT80Q9P2H3 777 aaPredicted RBP18.7■□□□□ 0.58
UBXN4-202ENST00000415164 TDRKHQ9Y2W6 561 aaKnown RBP18.7■□□□□ 0.58
UBXN4-202ENST00000415164 C17orf113A0A1B0GUU1 675 aa18.69■□□□□ 0.58
UBXN4-202ENST00000415164 MASP2O00187 686 aa18.69■□□□□ 0.58
UBXN4-202ENST00000415164 ALPPP05187 535 aa18.69■□□□□ 0.58
UBXN4-202ENST00000415164 ADRA1AP35348 466 aa18.69■□□□□ 0.58
UBXN4-202ENST00000415164 FOXL2P58012 376 aa18.69■□□□□ 0.58
UBXN4-202ENST00000415164 EIF3EP60228 445 aaKnown RBP18.69■□□□□ 0.58
UBXN4-202ENST00000415164 ESPL1Q14674 2120 aa18.69■□□□□ 0.58
UBXN4-202ENST00000415164 SERPINA9Q86WD7 417 aa18.69■□□□□ 0.58
UBXN4-202ENST00000415164 ADGRF3Q8IZF5 1079 aa18.69■□□□□ 0.58
UBXN4-202ENST00000415164 CLDN19Q8N6F1 224 aa18.69■□□□□ 0.58
UBXN4-202ENST00000415164 ACTL9Q8TC94 416 aa18.69■□□□□ 0.58
UBXN4-202ENST00000415164 DHRS4Q9BTZ2 278 aa18.69■□□□□ 0.58
UBXN4-202ENST00000415164 FAM60AQ9NP50 221 aa18.69■□□□□ 0.58
UBXN4-202ENST00000415164 TXLNGQ9NUQ3 528 aa18.69■□□□□ 0.58
UBXN4-202ENST00000415164 ERRFI1Q9UJM3 462 aaPredicted RBP18.69■□□□□ 0.58
UBXN4-202ENST00000415164 AKR1B15C9JRZ8 316 aaPredicted RBP18.68■□□□□ 0.58
UBXN4-202ENST00000415164 UGT2B7P16662 529 aa18.68■□□□□ 0.58
UBXN4-202ENST00000415164 ACRV1P26436 265 aa18.68■□□□□ 0.58
UBXN4-202ENST00000415164 GLRBP48167 497 aa18.68■□□□□ 0.58
UBXN4-202ENST00000415164 CD151P48509 253 aa18.68■□□□□ 0.58
UBXN4-202ENST00000415164 TCEAL1Q15170 157 aa18.68■□□□□ 0.58
UBXN4-202ENST00000415164 MAMDC2Q7Z304 686 aaPredicted RBP18.68■□□□□ 0.58
UBXN4-202ENST00000415164 CNGA4Q8IV77 575 aa18.68■□□□□ 0.58
UBXN4-202ENST00000415164 GALNT16Q8N428 558 aa18.68■□□□□ 0.58
UBXN4-202ENST00000415164 ZNF655Q8N720 491 aaPredicted RBP18.68■□□□□ 0.58
UBXN4-202ENST00000415164 OR5AR1Q8NGP9 310 aa18.68■□□□□ 0.58
UBXN4-202ENST00000415164 C17orf62Q9BQA9 187 aa18.68■□□□□ 0.58
UBXN4-202ENST00000415164 SMARCAL1Q9NZC9 954 aa18.68■□□□□ 0.58
UBXN4-202ENST00000415164 C5AR2Q9P296 337 aa18.68■□□□□ 0.58
UBXN4-202ENST00000415164 DHCR7Q9UBM7 475 aaKnown RBP18.68■□□□□ 0.58
UBXN4-202ENST00000415164 PLAGL1Q9UM63 463 aa18.68■□□□□ 0.58
UBXN4-202ENST00000415164 ICKQ9UPZ9 632 aa18.68■□□□□ 0.58
UBXN4-202ENST00000415164 CDYLQ9Y232 598 aa18.68■□□□□ 0.58
UBXN4-202ENST00000415164 ASF1AQ9Y294 204 aa18.68■□□□□ 0.58
UBXN4-202ENST00000415164 B3GNT3Q9Y2A9 372 aa18.68■□□□□ 0.58
UBXN4-202ENST00000415164 SHANK1Q9Y566 2161 aa18.68■□□□□ 0.58
UBXN4-202ENST00000415164 SPTBP11277 2137 aa18.67■□□□□ 0.58
UBXN4-202ENST00000415164 CCDC78A2IDD5 438 aa18.67■□□□□ 0.58
UBXN4-202ENST00000415164 AGAP14A8MT82 685 aa18.67■□□□□ 0.58
UBXN4-202ENST00000415164 MSL3P1P0C860 447 aa18.67■□□□□ 0.58
UBXN4-202ENST00000415164 RBP3P10745 1247 aa18.67■□□□□ 0.58
UBXN4-202ENST00000415164 TPH1P17752 444 aa18.67■□□□□ 0.58
UBXN4-202ENST00000415164 DCDP81605 110 aaKnown RBP18.67■□□□□ 0.58
UBXN4-202ENST00000415164 BOP1Q14137 746 aaKnown RBP18.67■□□□□ 0.58
UBXN4-202ENST00000415164 SSPNQ14714 243 aa18.67■□□□□ 0.58
UBXN4-202ENST00000415164 CYP2A13Q16696 494 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms