RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 H3BRJ5 948 aa15.17■□□□□ 0.02
CPNE1-208ENST00000414711 PRPSAP2O60256 369 aa15.17■□□□□ 0.02
CPNE1-208ENST00000414711 USP1O94782 785 aa15.17■□□□□ 0.02
CPNE1-208ENST00000414711 ZWINTO95229 277 aa15.17■□□□□ 0.02
CPNE1-208ENST00000414711 PSMA2P25787 234 aa15.17■□□□□ 0.02
CPNE1-208ENST00000414711 EEF1GP26641 437 aaKnown RBP15.17■□□□□ 0.02
CPNE1-208ENST00000414711 PBLDP30039 288 aaPredicted RBP15.17■□□□□ 0.02
CPNE1-208ENST00000414711 CTSCP53634 463 aa15.17■□□□□ 0.02
CPNE1-208ENST00000414711 MAN2A1Q16706 1144 aa15.17■□□□□ 0.02
CPNE1-208ENST00000414711 CES4AQ5XG92 561 aa15.17■□□□□ 0.02
CPNE1-208ENST00000414711 CLEC9AQ6UXN8 241 aa15.17■□□□□ 0.02
CPNE1-208ENST00000414711 PSTKQ8IV42 348 aaKnown RBP15.17■□□□□ 0.02
CPNE1-208ENST00000414711 DNAAF3Q8N9W5 541 aa15.17■□□□□ 0.02
CPNE1-208ENST00000414711 RNF214Q8ND24 703 aa15.17■□□□□ 0.02
CPNE1-208ENST00000414711 SPDYE1Q8NFV5 336 aaPredicted RBP15.17■□□□□ 0.02
CPNE1-208ENST00000414711 ARRDC2Q8TBH0 407 aa15.17■□□□□ 0.02
CPNE1-208ENST00000414711 ALPK1Q96QP1 1244 aa15.17■□□□□ 0.02
CPNE1-208ENST00000414711 SPSB2Q99619 263 aa15.17■□□□□ 0.02
CPNE1-208ENST00000414711 SRMSQ9H3Y6 488 aa15.17■□□□□ 0.02
CPNE1-208ENST00000414711 KCNN3Q9UGI6 736 aa15.17■□□□□ 0.02
CPNE1-208ENST00000414711 SHOC2Q9UQ13 582 aa15.17■□□□□ 0.02
CPNE1-208ENST00000414711 BTN3A1O00481 513 aa15.16■□□□□ 0.02
CPNE1-208ENST00000414711 HCRTR1O43613 425 aa15.16■□□□□ 0.02
CPNE1-208ENST00000414711 HPP00738 406 aa15.16■□□□□ 0.02
CPNE1-208ENST00000414711 CDK11BP21127 795 aaKnown RBP15.16■□□□□ 0.02
CPNE1-208ENST00000414711 AMPD1P23109 780 aa15.16■□□□□ 0.02
CPNE1-208ENST00000414711 NDUFS1P28331 727 aa15.16■□□□□ 0.02
CPNE1-208ENST00000414711 ADSLP30566 484 aaPredicted RBP15.16■□□□□ 0.02
CPNE1-208ENST00000414711 SERPINB6P35237 376 aa15.16■□□□□ 0.02
CPNE1-208ENST00000414711 CACNG1Q06432 222 aa15.16■□□□□ 0.02
CPNE1-208ENST00000414711 CDKAL1Q5VV42 579 aa15.16■□□□□ 0.02
CPNE1-208ENST00000414711 METRNLQ641Q3 311 aa15.16■□□□□ 0.02
CPNE1-208ENST00000414711 GAS2L3Q86XJ1 694 aa15.16■□□□□ 0.02
CPNE1-208ENST00000414711 FAM20CQ8IXL6 584 aa15.16■□□□□ 0.02
CPNE1-208ENST00000414711 C19orf47Q8N9M1 422 aaKnown RBP15.16■□□□□ 0.02
CPNE1-208ENST00000414711 CCDC110Q8TBZ0 833 aa15.16■□□□□ 0.02
CPNE1-208ENST00000414711 AGAP11Q8TF27 550 aa15.16■□□□□ 0.02
CPNE1-208ENST00000414711 THAP3Q8WTV1 239 aaPredicted RBP15.16■□□□□ 0.02
CPNE1-208ENST00000414711 LCN9Q8WX39 176 aa15.16■□□□□ 0.02
CPNE1-208ENST00000414711 C18orf12Q96KH6 178 aa15.16■□□□□ 0.02
CPNE1-208ENST00000414711 TUBGCP2Q9BSJ2 902 aa15.16■□□□□ 0.02
CPNE1-208ENST00000414711 RBSNQ9H1K0 784 aa15.16■□□□□ 0.02
CPNE1-208ENST00000414711 NDST4Q9H3R1 872 aa15.16■□□□□ 0.02
CPNE1-208ENST00000414711 ZNF160Q9HCG1 818 aa15.16■□□□□ 0.02
CPNE1-208ENST00000414711 FAM60AQ9NP50 221 aa15.16■□□□□ 0.02
CPNE1-208ENST00000414711 SAMSN1Q9NSI8 373 aaKnown RBP15.16■□□□□ 0.02
CPNE1-208ENST00000414711 IRAK4Q9NWZ3 460 aa15.16■□□□□ 0.02
CPNE1-208ENST00000414711 COQ3Q9NZJ6 369 aa15.16■□□□□ 0.02
CPNE1-208ENST00000414711 MRPS2Q9Y399 296 aaKnown RBP15.16■□□□□ 0.02
CPNE1-208ENST00000414711 INTS1Q8N201 2190 aaKnown RBP15.16■□□□□ 0.02
CPNE1-208ENST00000414711 FBN1P35555 2871 aaKnown RBP15.15■□□□□ 0.02
CPNE1-208ENST00000414711 BTN3A3O00478 584 aa15.15■□□□□ 0.02
CPNE1-208ENST00000414711 HEXAP06865 529 aa15.15■□□□□ 0.02
CPNE1-208ENST00000414711 CTSBP07858 339 aa15.15■□□□□ 0.02
CPNE1-208ENST00000414711 TPM2P07951 284 aa15.15■□□□□ 0.02
CPNE1-208ENST00000414711 SLC35G4P0C7Q5 338 aa15.15■□□□□ 0.02
CPNE1-208ENST00000414711 PIRTP0C851 137 aa15.15■□□□□ 0.02
CPNE1-208ENST00000414711 MIPP30301 263 aa15.15■□□□□ 0.02
CPNE1-208ENST00000414711 ARL4AP40617 200 aa15.15■□□□□ 0.02
CPNE1-208ENST00000414711 TMPRSS15P98073 1019 aa15.15■□□□□ 0.02
CPNE1-208ENST00000414711 NIPAL4Q0D2K0 466 aa15.15■□□□□ 0.02
CPNE1-208ENST00000414711 MYBPHQ13203 477 aa15.15■□□□□ 0.02
CPNE1-208ENST00000414711 KRT33BQ14525 404 aa15.15■□□□□ 0.02
CPNE1-208ENST00000414711 NKG7Q16617 165 aa15.15■□□□□ 0.02
CPNE1-208ENST00000414711 ATP13A5Q4VNC0 1218 aa15.15■□□□□ 0.02
CPNE1-208ENST00000414711 TLDC1Q6P9B6 456 aa15.15■□□□□ 0.02
CPNE1-208ENST00000414711 SHISA6Q6ZSJ9 500 aa15.15■□□□□ 0.02
CPNE1-208ENST00000414711 DMRTC2Q8IXT2 367 aaPredicted RBP15.15■□□□□ 0.02
CPNE1-208ENST00000414711 KBTBD2Q8IY47 623 aa15.15■□□□□ 0.02
CPNE1-208ENST00000414711 RASGEF1AQ8N9B8 481 aa15.15■□□□□ 0.02
CPNE1-208ENST00000414711 ACVR1CQ8NER5 493 aa15.15■□□□□ 0.02
CPNE1-208ENST00000414711 SUN3Q8TAQ9 357 aa15.15■□□□□ 0.02
CPNE1-208ENST00000414711 BRSK1Q8TDC3 778 aa15.15■□□□□ 0.02
CPNE1-208ENST00000414711 BRIX1Q8TDN6 353 aaKnown RBP15.15■□□□□ 0.02
CPNE1-208ENST00000414711 GPR137Q96N19 417 aa15.15■□□□□ 0.02
CPNE1-208ENST00000414711 ADGRE3Q9BY15 652 aa15.15■□□□□ 0.02
CPNE1-208ENST00000414711 ZCCHC2Q9C0B9 1178 aaKnown RBP15.15■□□□□ 0.02
CPNE1-208ENST00000414711 SOX17Q9H6I2 414 aaPredicted RBP15.15■□□□□ 0.02
CPNE1-208ENST00000414711 HAUS2Q9NVX0 235 aa15.15■□□□□ 0.02
CPNE1-208ENST00000414711 COLEC10Q9Y6Z7 277 aa15.15■□□□□ 0.02
CPNE1-208ENST00000414711 OR2AG2A6NM03 316 aa15.14■□□□□ 0.01
CPNE1-208ENST00000414711 PRAMEF1O95521 474 aa15.14■□□□□ 0.01
CPNE1-208ENST00000414711 MT-CYBP00156 380 aaPredicted RBP15.14■□□□□ 0.01
CPNE1-208ENST00000414711 UQCRHP07919 91 aa15.14■□□□□ 0.01
CPNE1-208ENST00000414711 ITGAXP20702 1163 aa15.14■□□□□ 0.01
CPNE1-208ENST00000414711 GABRA4P48169 554 aa15.14■□□□□ 0.01
CPNE1-208ENST00000414711 TCP11X2Q5H9J9 407 aa15.14■□□□□ 0.01
CPNE1-208ENST00000414711 OVCH1Q7RTY7 1134 aa15.14■□□□□ 0.01
CPNE1-208ENST00000414711 TMC3Q7Z5M5 1100 aa15.14■□□□□ 0.01
CPNE1-208ENST00000414711 SIRT6Q8N6T7 355 aa15.14■□□□□ 0.01
CPNE1-208ENST00000414711 BEND7Q8N7W2 519 aaPredicted RBP15.14■□□□□ 0.01
CPNE1-208ENST00000414711 PSMF1Q92530 271 aa15.14■□□□□ 0.01
CPNE1-208ENST00000414711 MAML1Q92585 1016 aa15.14■□□□□ 0.01
CPNE1-208ENST00000414711 RMDN2Q96LZ7 410 aa15.14■□□□□ 0.01
CPNE1-208ENST00000414711 DMRTA2Q96SC8 542 aa15.14■□□□□ 0.01
CPNE1-208ENST00000414711 MESP1Q9BRJ9 268 aa15.14■□□□□ 0.01
CPNE1-208ENST00000414711 LIME1Q9H400 295 aa15.14■□□□□ 0.01
CPNE1-208ENST00000414711 RBM22Q9NW64 420 aaKnown RBP eCLIP15.14■□□□□ 0.018e-16■■□□□ 14.2
CPNE1-208ENST00000414711 DNAJB12Q9NXW2 375 aaKnown RBP15.14■□□□□ 0.01
CPNE1-208ENST00000414711 NXT1Q9UKK6 140 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms