RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 P4HTMQ9NXG6 502 aa11.76□□□□□ -0.53
LIMS2-210ENST00000413578 ACTR10Q9NZ32 417 aa11.76□□□□□ -0.53
LIMS2-210ENST00000413578 TRHDEQ9UKU6 1024 aa11.76□□□□□ -0.53
LIMS2-210ENST00000413578 CCDC66A2RUB6 948 aa11.75□□□□□ -0.53
LIMS2-210ENST00000413578 C2orf74A8MZ97 194 aa11.75□□□□□ -0.53
LIMS2-210ENST00000413578 HACD1B0YJ81 288 aa11.75□□□□□ -0.53
LIMS2-210ENST00000413578 E2F3O00716 465 aa11.75□□□□□ -0.53
LIMS2-210ENST00000413578 PSTPIP1O43586 416 aa11.75□□□□□ -0.53
LIMS2-210ENST00000413578 LDB2O43679 373 aa11.75□□□□□ -0.53
LIMS2-210ENST00000413578 IPO13O94829 963 aaKnown RBP11.75□□□□□ -0.53
LIMS2-210ENST00000413578 IGHEP01854 428 aa11.75□□□□□ -0.53
LIMS2-210ENST00000413578 ATP1B2P14415 290 aaPredicted RBP11.75□□□□□ -0.53
LIMS2-210ENST00000413578 COMTP21964 271 aa11.75□□□□□ -0.53
LIMS2-210ENST00000413578 TNFRSF8P28908 595 aa11.75□□□□□ -0.53
LIMS2-210ENST00000413578 FOLR3P41439 243 aa11.75□□□□□ -0.53
LIMS2-210ENST00000413578 TNNT3P45378 269 aaPredicted RBP11.75□□□□□ -0.53
LIMS2-210ENST00000413578 FOXL2P58012 376 aa11.75□□□□□ -0.53
LIMS2-210ENST00000413578 RPA4Q13156 261 aa11.75□□□□□ -0.53
LIMS2-210ENST00000413578 OLIG2Q13516 323 aa11.75□□□□□ -0.53
LIMS2-210ENST00000413578 KRT33BQ14525 404 aa11.75□□□□□ -0.53
LIMS2-210ENST00000413578 LLGL1Q15334 1064 aa11.75□□□□□ -0.53
LIMS2-210ENST00000413578 LYPLAL1Q5VWZ2 237 aa11.75□□□□□ -0.53
LIMS2-210ENST00000413578 KAZNQ674X7 775 aa11.75□□□□□ -0.53
LIMS2-210ENST00000413578 DENND5AQ6IQ26 1287 aa11.75□□□□□ -0.53
LIMS2-210ENST00000413578 CAVIN1Q6NZI2 390 aaKnown RBP11.75□□□□□ -0.53
LIMS2-210ENST00000413578 SARM1Q6SZW1 724 aa11.75□□□□□ -0.53
LIMS2-210ENST00000413578 C19orf47Q8N9M1 422 aaKnown RBP11.75□□□□□ -0.53
LIMS2-210ENST00000413578 ST6GALNAC3Q8NDV1 305 aa11.75□□□□□ -0.53
LIMS2-210ENST00000413578 PROKR1Q8TCW9 393 aa11.75□□□□□ -0.53
LIMS2-210ENST00000413578 HEXDCQ8WVB3 486 aa11.75□□□□□ -0.53
LIMS2-210ENST00000413578 P3H4Q92791 437 aa11.75□□□□□ -0.53
LIMS2-210ENST00000413578 ULK4Q96C45 1275 aa11.75□□□□□ -0.53
LIMS2-210ENST00000413578 DCUN1D1Q96GG9 259 aa11.75□□□□□ -0.53
LIMS2-210ENST00000413578 RBM41Q96IZ5 413 aaKnown RBP11.75□□□□□ -0.53
LIMS2-210ENST00000413578 FERD3LQ96RJ6 166 aa11.75□□□□□ -0.53
LIMS2-210ENST00000413578 COPS8Q99627 209 aa11.75□□□□□ -0.53
LIMS2-210ENST00000413578 FICDQ9BVA6 458 aa11.75□□□□□ -0.53
LIMS2-210ENST00000413578 SPRTNQ9H040 489 aaPredicted RBP11.75□□□□□ -0.53
LIMS2-210ENST00000413578 XKR8Q9H6D3 395 aa11.75□□□□□ -0.53
LIMS2-210ENST00000413578 SLC22A11Q9NSA0 550 aa11.75□□□□□ -0.53
LIMS2-210ENST00000413578 SPTLC3Q9NUV7 552 aa11.75□□□□□ -0.53
LIMS2-210ENST00000413578 IFNKQ9P0W0 207 aa11.75□□□□□ -0.53
LIMS2-210ENST00000413578 RSPH14Q9UHP6 348 aa11.75□□□□□ -0.53
LIMS2-210ENST00000413578 CRLS1Q9UJA2 301 aa11.75□□□□□ -0.53
LIMS2-210ENST00000413578 ICKQ9UPZ9 632 aa11.75□□□□□ -0.53
LIMS2-210ENST00000413578 PTRH2Q9Y3E5 179 aaKnown RBP11.75□□□□□ -0.53
LIMS2-210ENST00000413578 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.75□□□□□ -0.53
LIMS2-210ENST00000413578 COPG1Q9Y678 874 aaKnown RBP11.75□□□□□ -0.53
LIMS2-210ENST00000413578 AP1M2Q9Y6Q5 423 aa11.75□□□□□ -0.53
LIMS2-210ENST00000413578 OTOGQ6ZRI0 2925 aa11.74□□□□□ -0.53
LIMS2-210ENST00000413578 FER1L5A0AVI2 2057 aa11.74□□□□□ -0.53
LIMS2-210ENST00000413578 IFRD1O00458 451 aaPredicted RBP11.74□□□□□ -0.53
LIMS2-210ENST00000413578 KLHL41O60662 606 aa11.74□□□□□ -0.53
LIMS2-210ENST00000413578 TPBGLP0DKB5 382 aa11.74□□□□□ -0.53
LIMS2-210ENST00000413578 RALBP11234 206 aa11.74□□□□□ -0.53
LIMS2-210ENST00000413578 GEMP55040 296 aa11.74□□□□□ -0.53
LIMS2-210ENST00000413578 DCDP81605 110 aaKnown RBP11.74□□□□□ -0.53
LIMS2-210ENST00000413578 KYNUQ16719 465 aa11.74□□□□□ -0.53
LIMS2-210ENST00000413578 TFDP3Q5H9I0 405 aa11.74□□□□□ -0.53
LIMS2-210ENST00000413578 MLIPQ5VWP3 458 aa11.74□□□□□ -0.53
LIMS2-210ENST00000413578 IGFL2Q6UWQ7 119 aa11.74□□□□□ -0.53
LIMS2-210ENST00000413578 MICALCLQ6ZW33 695 aa11.74□□□□□ -0.53
LIMS2-210ENST00000413578 SNX20Q7Z614 316 aa11.74□□□□□ -0.53
LIMS2-210ENST00000413578 TRIM73Q86UV7 250 aa11.74□□□□□ -0.53
LIMS2-210ENST00000413578 KLHDC8BQ8IXV7 354 aa11.74□□□□□ -0.53
LIMS2-210ENST00000413578 GPR135Q8IZ08 494 aa11.74□□□□□ -0.53
LIMS2-210ENST00000413578 PHC3Q8NDX5 983 aa11.74□□□□□ -0.53
LIMS2-210ENST00000413578 OR8K1Q8NGG5 319 aa11.74□□□□□ -0.53
LIMS2-210ENST00000413578 TM9SF4Q92544 642 aa11.74□□□□□ -0.53
LIMS2-210ENST00000413578 TFGQ92734 400 aaPredicted RBP11.74□□□□□ -0.53
LIMS2-210ENST00000413578 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.74□□□□□ -0.53
LIMS2-210ENST00000413578 NACC2Q96BF6 587 aa11.74□□□□□ -0.53
LIMS2-210ENST00000413578 HAUS1Q96CS2 278 aa11.74□□□□□ -0.53
LIMS2-210ENST00000413578 OR2A14Q96R47 310 aa11.74□□□□□ -0.53
LIMS2-210ENST00000413578 CHP1Q99653 195 aa11.74□□□□□ -0.53
LIMS2-210ENST00000413578 APOL2Q9BQE5 337 aa11.74□□□□□ -0.53
LIMS2-210ENST00000413578 HGH1Q9BTY7 390 aa11.74□□□□□ -0.53
LIMS2-210ENST00000413578 SLC7A5P2Q9GIP4 190 aa11.74□□□□□ -0.53
LIMS2-210ENST00000413578 ILKAPQ9H0C8 392 aaPredicted RBP11.74□□□□□ -0.53
LIMS2-210ENST00000413578 ZDHHC3Q9NYG2 299 aa11.74□□□□□ -0.53
LIMS2-210ENST00000413578 CDYLQ9Y232 598 aa11.74□□□□□ -0.53
LIMS2-210ENST00000413578 CSAG2Q9Y5P2 127 aa11.74□□□□□ -0.53
LIMS2-210ENST00000413578 CFAP99D6REC4 459 aa11.73□□□□□ -0.53
LIMS2-210ENST00000413578 H7C0S8 307 aa11.73□□□□□ -0.53
LIMS2-210ENST00000413578 PEX12O00623 359 aa11.73□□□□□ -0.53
LIMS2-210ENST00000413578 ZSCAN9O15535 394 aaPredicted RBP11.73□□□□□ -0.53
LIMS2-210ENST00000413578 MAP3K7O43318 606 aa11.73□□□□□ -0.53
LIMS2-210ENST00000413578 AKR1B10O60218 316 aa11.73□□□□□ -0.53
LIMS2-210ENST00000413578 OR2B3O76000 313 aa11.73□□□□□ -0.53
LIMS2-210ENST00000413578 ANXA9O76027 345 aa11.73□□□□□ -0.53
LIMS2-210ENST00000413578 ONECUT2O95948 504 aa11.73□□□□□ -0.53
LIMS2-210ENST00000413578 CD63P08962 238 aa11.73□□□□□ -0.53
LIMS2-210ENST00000413578 TNNT1P13805 278 aa11.73□□□□□ -0.53
LIMS2-210ENST00000413578 UGT2B7P16662 529 aa11.73□□□□□ -0.53
LIMS2-210ENST00000413578 ITGALP20701 1170 aa11.73□□□□□ -0.53
LIMS2-210ENST00000413578 ITGAXP20702 1163 aa11.73□□□□□ -0.53
LIMS2-210ENST00000413578 ACRV1P26436 265 aa11.73□□□□□ -0.53
LIMS2-210ENST00000413578 ACADLP28330 430 aa11.73□□□□□ -0.53
LIMS2-210ENST00000413578 RBL1P28749 1068 aa11.73□□□□□ -0.53
LIMS2-210ENST00000413578 MARCKSL1P49006 195 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms