RNA–Protein interactions for RNA: ENST00000412256.1

RAB11FIP3-202, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-202ENST00000412256 GPR135Q8IZ08 494 aa13.5□□□□□ -0.25
RAB11FIP3-202ENST00000412256 CLDN19Q8N6F1 224 aa13.5□□□□□ -0.25
RAB11FIP3-202ENST00000412256 RBMXL3Q8N7X1 1067 aaKnown RBP13.5□□□□□ -0.25
RAB11FIP3-202ENST00000412256 CCDC110Q8TBZ0 833 aa13.5□□□□□ -0.25
RAB11FIP3-202ENST00000412256 TFGQ92734 400 aaPredicted RBP13.5□□□□□ -0.25
RAB11FIP3-202ENST00000412256 TBL1YQ9BQ87 522 aa13.5□□□□□ -0.25
RAB11FIP3-202ENST00000412256 DPH2Q9BQC3 489 aaPredicted RBP13.5□□□□□ -0.25
RAB11FIP3-202ENST00000412256 HGH1Q9BTY7 390 aa13.5□□□□□ -0.25
RAB11FIP3-202ENST00000412256 OR52A5Q9H2C5 316 aa13.5□□□□□ -0.25
RAB11FIP3-202ENST00000412256 MVB12BQ9H7P6 319 aa13.5□□□□□ -0.25
RAB11FIP3-202ENST00000412256 VPS37BQ9H9H4 285 aa13.5□□□□□ -0.25
RAB11FIP3-202ENST00000412256 ZDHHC3Q9NYG2 299 aa13.5□□□□□ -0.25
RAB11FIP3-202ENST00000412256 ACTR10Q9NZ32 417 aa13.5□□□□□ -0.25
RAB11FIP3-202ENST00000412256 GPN3Q9UHW5 284 aaPredicted RBP13.5□□□□□ -0.25
RAB11FIP3-202ENST00000412256 PCDHA13Q9Y5I0 950 aa13.5□□□□□ -0.25
RAB11FIP3-202ENST00000412256 KRT86O43790 486 aa13.49□□□□□ -0.25
RAB11FIP3-202ENST00000412256 RBP3P10745 1247 aa13.49□□□□□ -0.25
RAB11FIP3-202ENST00000412256 TPH1P17752 444 aa13.49□□□□□ -0.25
RAB11FIP3-202ENST00000412256 VARSP26640 1264 aaKnown RBP13.49□□□□□ -0.25
RAB11FIP3-202ENST00000412256 CD151P48509 253 aa13.49□□□□□ -0.25
RAB11FIP3-202ENST00000412256 ZNF140P52738 457 aaPredicted RBP13.49□□□□□ -0.25
RAB11FIP3-202ENST00000412256 COPS2P61201 443 aa13.49□□□□□ -0.25
RAB11FIP3-202ENST00000412256 MSLNQ13421 630 aaPredicted RBP13.49□□□□□ -0.25
RAB11FIP3-202ENST00000412256 SPA17Q15506 151 aa13.49□□□□□ -0.25
RAB11FIP3-202ENST00000412256 GPR33Q49SQ1 333 aa13.49□□□□□ -0.25
RAB11FIP3-202ENST00000412256 C1orf189Q5VU69 101 aa13.49□□□□□ -0.25
RAB11FIP3-202ENST00000412256 SLC6A19Q695T7 634 aa13.49□□□□□ -0.25
RAB11FIP3-202ENST00000412256 MICALCLQ6ZW33 695 aa13.49□□□□□ -0.25
RAB11FIP3-202ENST00000412256 SERPINA9Q86WD7 417 aa13.49□□□□□ -0.25
RAB11FIP3-202ENST00000412256 HPS6Q86YV9 775 aa13.49□□□□□ -0.25
RAB11FIP3-202ENST00000412256 ADGRF3Q8IZF5 1079 aa13.49□□□□□ -0.25
RAB11FIP3-202ENST00000412256 Q8NA96 180 aa13.49□□□□□ -0.25
RAB11FIP3-202ENST00000412256 GLIS1Q8NBF1 620 aa13.49□□□□□ -0.25
RAB11FIP3-202ENST00000412256 RNF214Q8ND24 703 aa13.49□□□□□ -0.25
RAB11FIP3-202ENST00000412256 PNPLA2Q96AD5 504 aa13.49□□□□□ -0.25
RAB11FIP3-202ENST00000412256 LRRC45Q96CN5 670 aa13.49□□□□□ -0.25
RAB11FIP3-202ENST00000412256 C19orf60Q96EN9 201 aa13.49□□□□□ -0.25
RAB11FIP3-202ENST00000412256 DNAJC1Q96KC8 554 aaKnown RBP13.49□□□□□ -0.25
RAB11FIP3-202ENST00000412256 PITPNM3Q9BZ71 974 aa13.49□□□□□ -0.25
RAB11FIP3-202ENST00000412256 SLC29A3Q9BZD2 475 aa13.49□□□□□ -0.25
RAB11FIP3-202ENST00000412256 SPRTNQ9H040 489 aaPredicted RBP13.49□□□□□ -0.25
RAB11FIP3-202ENST00000412256 PADI2Q9Y2J8 665 aa13.49□□□□□ -0.25
RAB11FIP3-202ENST00000412256 PEX12O00623 359 aa13.48□□□□□ -0.25
RAB11FIP3-202ENST00000412256 OR2B3O76000 313 aa13.48□□□□□ -0.25
RAB11FIP3-202ENST00000412256 MSL3P1P0C860 447 aa13.48□□□□□ -0.25
RAB11FIP3-202ENST00000412256 PRSS56P0CW18 603 aa13.48□□□□□ -0.25
RAB11FIP3-202ENST00000412256 RNF224P0DH78 156 aa13.48□□□□□ -0.25
RAB11FIP3-202ENST00000412256 CBSLP0DN79 551 aa13.48□□□□□ -0.25
RAB11FIP3-202ENST00000412256 ACRV1P26436 265 aa13.48□□□□□ -0.25
RAB11FIP3-202ENST00000412256 CBSP35520 551 aa13.48□□□□□ -0.25
RAB11FIP3-202ENST00000412256 NAP1L1P55209 391 aaKnown RBP13.48□□□□□ -0.25
RAB11FIP3-202ENST00000412256 RPA4Q13156 261 aa13.48□□□□□ -0.25
RAB11FIP3-202ENST00000412256 BOP1Q14137 746 aaKnown RBP13.48□□□□□ -0.25
RAB11FIP3-202ENST00000412256 SSPNQ14714 243 aa13.48□□□□□ -0.25
RAB11FIP3-202ENST00000412256 BRD3Q15059 726 aa13.48□□□□□ -0.25
RAB11FIP3-202ENST00000412256 PLEKHN1Q494U1 663 aaPredicted RBP13.48□□□□□ -0.25
RAB11FIP3-202ENST00000412256 DENND5AQ6IQ26 1287 aa13.48□□□□□ -0.25
RAB11FIP3-202ENST00000412256 C11orf63Q6NUN7 778 aa13.48□□□□□ -0.25
RAB11FIP3-202ENST00000412256 SPESP1Q6UW49 350 aa13.48□□□□□ -0.25
RAB11FIP3-202ENST00000412256 TRIM73Q86UV7 250 aa13.48□□□□□ -0.25
RAB11FIP3-202ENST00000412256 CISD2Q8N5K1 135 aaKnown RBP13.48□□□□□ -0.25
RAB11FIP3-202ENST00000412256 SPATA13Q96N96 652 aa13.48□□□□□ -0.25
RAB11FIP3-202ENST00000412256 ALS2CR12Q96Q35 445 aa13.48□□□□□ -0.25
RAB11FIP3-202ENST00000412256 SMAD5Q99717 465 aaKnown RBP13.48□□□□□ -0.25
RAB11FIP3-202ENST00000412256 DHRS4Q9BTZ2 278 aa13.48□□□□□ -0.25
RAB11FIP3-202ENST00000412256 OSBPL8Q9BZF1 889 aa13.48□□□□□ -0.25
RAB11FIP3-202ENST00000412256 FAM60AQ9NP50 221 aa13.48□□□□□ -0.25
RAB11FIP3-202ENST00000412256 CUEDC1Q9NWM3 386 aaPredicted RBP13.48□□□□□ -0.25
RAB11FIP3-202ENST00000412256 IRAK4Q9NWZ3 460 aa13.48□□□□□ -0.25
RAB11FIP3-202ENST00000412256 SMARCAL1Q9NZC9 954 aa13.48□□□□□ -0.25
RAB11FIP3-202ENST00000412256 TDRKHQ9Y2W6 561 aaKnown RBP13.48□□□□□ -0.25
RAB11FIP3-202ENST00000412256 PTRH2Q9Y3E5 179 aaKnown RBP13.48□□□□□ -0.25
RAB11FIP3-202ENST00000412256 KLF7O75840 302 aaPredicted RBP13.47□□□□□ -0.25
RAB11FIP3-202ENST00000412256 CETN2P41208 172 aa13.47□□□□□ -0.25
RAB11FIP3-202ENST00000412256 DEFB110Q30KQ9 67 aa13.47□□□□□ -0.25
RAB11FIP3-202ENST00000412256 UNC5AQ6ZN44 842 aa13.47□□□□□ -0.25
RAB11FIP3-202ENST00000412256 CLEC1AQ8NC01 280 aa13.47□□□□□ -0.25
RAB11FIP3-202ENST00000412256 OR5AR1Q8NGP9 310 aa13.47□□□□□ -0.25
RAB11FIP3-202ENST00000412256 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.47□□□□□ -0.253e-11■■■■■ 28.8
RAB11FIP3-202ENST00000412256 SNRNP40Q96DI7 357 aaKnown RBP13.47□□□□□ -0.25
RAB11FIP3-202ENST00000412256 TCTN2Q96GX1 697 aa13.47□□□□□ -0.25
RAB11FIP3-202ENST00000412256 FER1L6-AS2Q96M78 137 aa13.47□□□□□ -0.25
RAB11FIP3-202ENST00000412256 IP6K3Q96PC2 410 aa13.47□□□□□ -0.25
RAB11FIP3-202ENST00000412256 PPP1R2P1Q96PQ5 205 aa13.47□□□□□ -0.25
RAB11FIP3-202ENST00000412256 C17orf62Q9BQA9 187 aa13.47□□□□□ -0.25
RAB11FIP3-202ENST00000412256 ARNT2Q9HBZ2 717 aa13.47□□□□□ -0.25
RAB11FIP3-202ENST00000412256 LUC7LQ9NQ29 371 aaKnown RBP13.47□□□□□ -0.25
RAB11FIP3-202ENST00000412256 C5AR2Q9P296 337 aa13.47□□□□□ -0.25
RAB11FIP3-202ENST00000412256 IFT80Q9P2H3 777 aaPredicted RBP13.47□□□□□ -0.25
RAB11FIP3-202ENST00000412256 FEZ2Q9UHY8 353 aaPredicted RBP13.47□□□□□ -0.25
RAB11FIP3-202ENST00000412256 ASF1AQ9Y294 204 aa13.47□□□□□ -0.25
RAB11FIP3-202ENST00000412256 EFR3BQ9Y2G0 817 aa13.47□□□□□ -0.25
RAB11FIP3-202ENST00000412256 PCDHA3Q9Y5H8 950 aa13.47□□□□□ -0.25
RAB11FIP3-202ENST00000412256 AP1M2Q9Y6Q5 423 aa13.47□□□□□ -0.25
RAB11FIP3-202ENST00000412256 NBPF19A0A087WUL8 3843 aa13.47□□□□□ -0.25
RAB11FIP3-202ENST00000412256 IGLV3-16A0A075B6K0 115 aa13.46□□□□□ -0.25
RAB11FIP3-202ENST00000412256 CCDC78A2IDD5 438 aa13.46□□□□□ -0.25
RAB11FIP3-202ENST00000412256 TJP3O95049 919 aa13.46□□□□□ -0.25
RAB11FIP3-202ENST00000412256 DDAH2O95865 285 aa13.46□□□□□ -0.25
RAB11FIP3-202ENST00000412256 ALPPP05187 535 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms