RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 SARM1Q6SZW1 724 aa13.79□□□□□ -0.2
HLA-DQB2-229ENST00000411527 RANBP10Q6VN20 620 aa13.79□□□□□ -0.2
HLA-DQB2-229ENST00000411527 HOOK3Q86VS8 718 aa13.79□□□□□ -0.2
HLA-DQB2-229ENST00000411527 ADGRF3Q8IZF5 1079 aa13.79□□□□□ -0.2
HLA-DQB2-229ENST00000411527 NXPE1Q8N323 547 aa13.79□□□□□ -0.2
HLA-DQB2-229ENST00000411527 GALNT16Q8N428 558 aa13.79□□□□□ -0.2
HLA-DQB2-229ENST00000411527 RANBP9Q96S59 729 aa13.79□□□□□ -0.2
HLA-DQB2-229ENST00000411527 COPS8Q99627 209 aa13.79□□□□□ -0.2
HLA-DQB2-229ENST00000411527 GORASP1Q9BQQ3 440 aa13.79□□□□□ -0.2
HLA-DQB2-229ENST00000411527 ILKAPQ9H0C8 392 aaPredicted RBP13.79□□□□□ -0.2
HLA-DQB2-229ENST00000411527 GBA3Q9H227 469 aa13.79□□□□□ -0.2
HLA-DQB2-229ENST00000411527 MVB12BQ9H7P6 319 aa13.79□□□□□ -0.2
HLA-DQB2-229ENST00000411527 C10orf88Q9H8K7 445 aa13.79□□□□□ -0.2
HLA-DQB2-229ENST00000411527 COG4Q9H9E3 785 aa13.79□□□□□ -0.2
HLA-DQB2-229ENST00000411527 NHEJ1Q9H9Q4 299 aaPredicted RBP13.79□□□□□ -0.2
HLA-DQB2-229ENST00000411527 ACTR10Q9NZ32 417 aa13.79□□□□□ -0.2
HLA-DQB2-229ENST00000411527 PTRH2Q9Y3E5 179 aaKnown RBP13.79□□□□□ -0.2
HLA-DQB2-229ENST00000411527 COPG1Q9Y678 874 aaKnown RBP13.79□□□□□ -0.2
HLA-DQB2-229ENST00000411527 ITPR2Q14571 2701 aa13.79□□□□□ -0.2
HLA-DQB2-229ENST00000411527 MDC1Q14676 2089 aaKnown RBP13.78□□□□□ -0.2
HLA-DQB2-229ENST00000411527 hCG_1818297A0A087WSY0 165 aa13.78□□□□□ -0.2
HLA-DQB2-229ENST00000411527 H7C0C1 242 aa13.78□□□□□ -0.2
HLA-DQB2-229ENST00000411527 MASP2O00187 686 aa13.78□□□□□ -0.2
HLA-DQB2-229ENST00000411527 PSTPIP1O43586 416 aa13.78□□□□□ -0.2
HLA-DQB2-229ENST00000411527 KLHL41O60662 606 aa13.78□□□□□ -0.2
HLA-DQB2-229ENST00000411527 OR2B3O76000 313 aa13.78□□□□□ -0.2
HLA-DQB2-229ENST00000411527 ZRANB2O95218 330 aaKnown RBP eCLIP13.78□□□□□ -0.2
HLA-DQB2-229ENST00000411527 CRTAMO95727 393 aa13.78□□□□□ -0.2
HLA-DQB2-229ENST00000411527 ITGALP20701 1170 aa13.78□□□□□ -0.2
HLA-DQB2-229ENST00000411527 RBL1P28749 1068 aa13.78□□□□□ -0.2
HLA-DQB2-229ENST00000411527 ADRA1AP35348 466 aa13.78□□□□□ -0.2
HLA-DQB2-229ENST00000411527 FOLR3P41439 243 aa13.78□□□□□ -0.2
HLA-DQB2-229ENST00000411527 ATP5OP48047 213 aa13.78□□□□□ -0.2
HLA-DQB2-229ENST00000411527 CD151P48509 253 aa13.78□□□□□ -0.2
HLA-DQB2-229ENST00000411527 DCAF10Q5QP82 559 aa13.78□□□□□ -0.2
HLA-DQB2-229ENST00000411527 ITPRIPL1Q6GPH6 555 aa13.78□□□□□ -0.2
HLA-DQB2-229ENST00000411527 ZNF449Q6P9G9 518 aa13.78□□□□□ -0.2
HLA-DQB2-229ENST00000411527 SPESP1Q6UW49 350 aa13.78□□□□□ -0.2
HLA-DQB2-229ENST00000411527 IGFL3Q6UXB1 125 aa13.78□□□□□ -0.2
HLA-DQB2-229ENST00000411527 SNX20Q7Z614 316 aa13.78□□□□□ -0.2
HLA-DQB2-229ENST00000411527 CCDC50Q8IVM0 306 aa13.78□□□□□ -0.2
HLA-DQB2-229ENST00000411527 RCOR2Q8IZ40 523 aa13.78□□□□□ -0.2
HLA-DQB2-229ENST00000411527 HEXDCQ8WVB3 486 aa13.78□□□□□ -0.2
HLA-DQB2-229ENST00000411527 TFGQ92734 400 aaPredicted RBP13.78□□□□□ -0.2
HLA-DQB2-229ENST00000411527 C17orf62Q9BQA9 187 aa13.78□□□□□ -0.2
HLA-DQB2-229ENST00000411527 HGH1Q9BTY7 390 aa13.78□□□□□ -0.2
HLA-DQB2-229ENST00000411527 SPRTNQ9H040 489 aaPredicted RBP13.78□□□□□ -0.2
HLA-DQB2-229ENST00000411527 ZNF552Q9H707 407 aaPredicted RBP13.78□□□□□ -0.2
HLA-DQB2-229ENST00000411527 FAM60AQ9NP50 221 aa13.78□□□□□ -0.2
HLA-DQB2-229ENST00000411527 ALG6Q9Y672 507 aa13.78□□□□□ -0.2
HLA-DQB2-229ENST00000411527 AP1M2Q9Y6Q5 423 aa13.78□□□□□ -0.2
HLA-DQB2-229ENST00000411527 CCL22O00626 93 aa13.77□□□□□ -0.21
HLA-DQB2-229ENST00000411527 IGHEP01854 428 aa13.77□□□□□ -0.21
HLA-DQB2-229ENST00000411527 CD63P08962 238 aa13.77□□□□□ -0.21
HLA-DQB2-229ENST00000411527 GLRBP48167 497 aa13.77□□□□□ -0.21
HLA-DQB2-229ENST00000411527 CDKN1CP49918 316 aaPredicted RBP13.77□□□□□ -0.21
HLA-DQB2-229ENST00000411527 DCDP81605 110 aaKnown RBP13.77□□□□□ -0.21
HLA-DQB2-229ENST00000411527 BOP1Q14137 746 aaKnown RBP13.77□□□□□ -0.21
HLA-DQB2-229ENST00000411527 TRIM14Q14142 442 aa13.77□□□□□ -0.21
HLA-DQB2-229ENST00000411527 SLC9A5Q14940 896 aa13.77□□□□□ -0.21
HLA-DQB2-229ENST00000411527 TCEAL1Q15170 157 aa13.77□□□□□ -0.21
HLA-DQB2-229ENST00000411527 DEFB110Q30KQ9 67 aa13.77□□□□□ -0.21
HLA-DQB2-229ENST00000411527 ZNF658BQ4V348 819 aaPredicted RBP13.77□□□□□ -0.21
HLA-DQB2-229ENST00000411527 RHBDD2Q6NTF9 364 aa13.77□□□□□ -0.21
HLA-DQB2-229ENST00000411527 ANKRD12Q6UB98 2062 aa13.77□□□□□ -0.21
HLA-DQB2-229ENST00000411527 TRIM73Q86UV7 250 aa13.77□□□□□ -0.21
HLA-DQB2-229ENST00000411527 KATNAL2Q8IYT4 538 aa13.77□□□□□ -0.21
HLA-DQB2-229ENST00000411527 ZADH2Q8N4Q0 377 aa13.77□□□□□ -0.21
HLA-DQB2-229ENST00000411527 C19orf47Q8N9M1 422 aaKnown RBP13.77□□□□□ -0.21
HLA-DQB2-229ENST00000411527 TTC13Q8NBP0 860 aa13.77□□□□□ -0.21
HLA-DQB2-229ENST00000411527 INPP5DQ92835 1189 aa13.77□□□□□ -0.21
HLA-DQB2-229ENST00000411527 HEMGNQ9BXL5 484 aa13.77□□□□□ -0.21
HLA-DQB2-229ENST00000411527 GOLPH3Q9H4A6 298 aa13.77□□□□□ -0.21
HLA-DQB2-229ENST00000411527 VPS37BQ9H9H4 285 aa13.77□□□□□ -0.21
HLA-DQB2-229ENST00000411527 ABHD10Q9NUJ1 306 aa13.77□□□□□ -0.21
HLA-DQB2-229ENST00000411527 P4HTMQ9NXG6 502 aa13.77□□□□□ -0.21
HLA-DQB2-229ENST00000411527 ZDHHC3Q9NYG2 299 aa13.77□□□□□ -0.21
HLA-DQB2-229ENST00000411527 IFT80Q9P2H3 777 aaPredicted RBP13.77□□□□□ -0.21
HLA-DQB2-229ENST00000411527 NDOR1Q9UHB4 597 aa13.77□□□□□ -0.21
HLA-DQB2-229ENST00000411527 CDYLQ9Y232 598 aa13.77□□□□□ -0.21
HLA-DQB2-229ENST00000411527 AAR2Q9Y312 384 aaKnown RBP13.77□□□□□ -0.21
HLA-DQB2-229ENST00000411527 DOPEY1Q5JWR5 2465 aa13.76□□□□□ -0.21
HLA-DQB2-229ENST00000411527 HCRTR1O43613 425 aa13.76□□□□□ -0.21
HLA-DQB2-229ENST00000411527 IPO13O94829 963 aaKnown RBP13.76□□□□□ -0.21
HLA-DQB2-229ENST00000411527 MC4RP32245 332 aa13.76□□□□□ -0.21
HLA-DQB2-229ENST00000411527 ZNF140P52738 457 aaPredicted RBP13.76□□□□□ -0.21
HLA-DQB2-229ENST00000411527 FOXL2P58012 376 aa13.76□□□□□ -0.21
HLA-DQB2-229ENST00000411527 RPA4Q13156 261 aa13.76□□□□□ -0.21
HLA-DQB2-229ENST00000411527 MSLNQ13421 630 aaPredicted RBP13.76□□□□□ -0.21
HLA-DQB2-229ENST00000411527 PRPSAP1Q14558 356 aa13.76□□□□□ -0.21
HLA-DQB2-229ENST00000411527 ZIC1Q15915 447 aa13.76□□□□□ -0.21
HLA-DQB2-229ENST00000411527 GPR33Q49SQ1 333 aa13.76□□□□□ -0.21
HLA-DQB2-229ENST00000411527 CRB2Q5IJ48 1285 aa13.76□□□□□ -0.21
HLA-DQB2-229ENST00000411527 ANKRD20A2Q5SQ80 823 aa13.76□□□□□ -0.21
HLA-DQB2-229ENST00000411527 ANKRD20A1Q5TYW2 823 aa13.76□□□□□ -0.21
HLA-DQB2-229ENST00000411527 ANKRD20A3Q5VUR7 823 aa13.76□□□□□ -0.21
HLA-DQB2-229ENST00000411527 BBS12Q6ZW61 710 aa13.76□□□□□ -0.21
HLA-DQB2-229ENST00000411527 CLDN19Q8N6F1 224 aa13.76□□□□□ -0.21
HLA-DQB2-229ENST00000411527 OR2Y1Q8NGV0 311 aa13.76□□□□□ -0.21
HLA-DQB2-229ENST00000411527 TM9SF4Q92544 642 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms