RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 OR5K3A6NET4 321 aa19.3■□□□□ 0.68
PDLIM2-207ENST00000409417 ZNF500O60304 480 aaPredicted RBP19.3■□□□□ 0.68
PDLIM2-207ENST00000409417 DXOO77932 396 aaKnown RBP19.3■□□□□ 0.68
PDLIM2-207ENST00000409417 SSTR1P30872 391 aa19.3■□□□□ 0.68
PDLIM2-207ENST00000409417 MAGEA4P43358 317 aa19.3■□□□□ 0.68
PDLIM2-207ENST00000409417 GFERP55789 205 aa19.3■□□□□ 0.68
PDLIM2-207ENST00000409417 ABRQ12979 859 aa19.3■□□□□ 0.68
PDLIM2-207ENST00000409417 C16orf72Q14CZ0 275 aa19.3■□□□□ 0.68
PDLIM2-207ENST00000409417 IGF2-ASQ6U949 168 aa19.3■□□□□ 0.68
PDLIM2-207ENST00000409417 UNC5DQ6UXZ4 953 aa19.3■□□□□ 0.68
PDLIM2-207ENST00000409417 C3orf62Q6ZUJ4 267 aa19.3■□□□□ 0.68
PDLIM2-207ENST00000409417 OR4E2Q8NGC2 313 aa19.3■□□□□ 0.68
PDLIM2-207ENST00000409417 OR52E1Q8NGJ3 308 aa19.3■□□□□ 0.68
PDLIM2-207ENST00000409417 TGM7Q96PF1 710 aa19.3■□□□□ 0.68
PDLIM2-207ENST00000409417 SRMSQ9H3Y6 488 aa19.3■□□□□ 0.68
PDLIM2-207ENST00000409417 HRASLS2Q9NWW9 162 aa19.3■□□□□ 0.68
PDLIM2-207ENST00000409417 LOXL2Q9Y4K0 774 aa19.3■□□□□ 0.68
PDLIM2-207ENST00000409417 WDFY3Q8IZQ1 3526 aa19.29■□□□□ 0.68
PDLIM2-207ENST00000409417 OR6C74A6NCV1 312 aa19.29■□□□□ 0.68
PDLIM2-207ENST00000409417 TOX3O15405 576 aaPredicted RBP19.29■□□□□ 0.68
PDLIM2-207ENST00000409417 BRINP1O60477 761 aa19.29■□□□□ 0.68
PDLIM2-207ENST00000409417 RPN2P04844 631 aa19.29■□□□□ 0.68
PDLIM2-207ENST00000409417 GSTA2P09210 222 aa19.29■□□□□ 0.68
PDLIM2-207ENST00000409417 ANKRD34CP0C6C1 535 aa19.29■□□□□ 0.68
PDLIM2-207ENST00000409417 TTLL9Q3SXZ7 439 aa19.29■□□□□ 0.68
PDLIM2-207ENST00000409417 SNAP47Q5SQN1 464 aa19.29■□□□□ 0.68
PDLIM2-207ENST00000409417 IRGCQ6NXR0 463 aa19.29■□□□□ 0.68
PDLIM2-207ENST00000409417 CAPN12Q6ZSI9 719 aa19.29■□□□□ 0.68
PDLIM2-207ENST00000409417 OOSP2Q86WS3 158 aa19.29■□□□□ 0.68
PDLIM2-207ENST00000409417 AGBL5Q8NDL9 886 aa19.29■□□□□ 0.68
PDLIM2-207ENST00000409417 GIMAP7Q8NHV1 300 aa19.29■□□□□ 0.68
PDLIM2-207ENST00000409417 MDM1Q8TC05 714 aa19.29■□□□□ 0.68
PDLIM2-207ENST00000409417 SKA2Q8WVK7 121 aaPredicted RBP19.29■□□□□ 0.68
PDLIM2-207ENST00000409417 PRR11Q96HE9 360 aaPredicted RBP19.29■□□□□ 0.68
PDLIM2-207ENST00000409417 C9orf72Q96LT7 481 aa19.29■□□□□ 0.68
PDLIM2-207ENST00000409417 SLC46A1Q96NT5 459 aa19.29■□□□□ 0.68
PDLIM2-207ENST00000409417 CNTNAP3BQ96NU0 1288 aa19.29■□□□□ 0.68
PDLIM2-207ENST00000409417 CNTNAP3Q9BZ76 1288 aa19.29■□□□□ 0.68
PDLIM2-207ENST00000409417 MTRF1LQ9UGC7 380 aaKnown RBP19.29■□□□□ 0.68
PDLIM2-207ENST00000409417 KLHL3Q9UH77 587 aa19.29■□□□□ 0.68
PDLIM2-207ENST00000409417 CORO1CQ9ULV4 474 aaPredicted RBP19.29■□□□□ 0.68
PDLIM2-207ENST00000409417 DHRS7Q9Y394 339 aa19.29■□□□□ 0.68
PDLIM2-207ENST00000409417 DMXL2Q8TDJ6 3036 aa19.29■□□□□ 0.68
PDLIM2-207ENST00000409417 ANKRD11Q6UB99 2663 aaPredicted RBP19.29■□□□□ 0.68
PDLIM2-207ENST00000409417 TCRBV9S1A1TA0A576 114 aa19.28■□□□□ 0.68
PDLIM2-207ENST00000409417 PMS2P1A4D2B8 440 aa19.28■□□□□ 0.68
PDLIM2-207ENST00000409417 VPS26AO75436 327 aa19.28■□□□□ 0.68
PDLIM2-207ENST00000409417 CSTF2P33240 577 aaKnown RBP eCLIP19.28■□□□□ 0.68
PDLIM2-207ENST00000409417 SKIV2L2P42285 1042 aaKnown RBP19.28■□□□□ 0.68
PDLIM2-207ENST00000409417 MLLT3P42568 568 aaPredicted RBP19.28■□□□□ 0.68
PDLIM2-207ENST00000409417 ACSBG2Q5FVE4 666 aa19.28■□□□□ 0.68
PDLIM2-207ENST00000409417 FOXR1Q6PIV2 292 aa19.28■□□□□ 0.68
PDLIM2-207ENST00000409417 SLC26A11Q86WA9 606 aa19.28■□□□□ 0.68
PDLIM2-207ENST00000409417 AMIGO1Q86WK6 493 aa19.28■□□□□ 0.68
PDLIM2-207ENST00000409417 KDF1Q8NAX2 398 aaPredicted RBP19.28■□□□□ 0.68
PDLIM2-207ENST00000409417 SIDT2Q8NBJ9 832 aaKnown RBP19.28■□□□□ 0.68
PDLIM2-207ENST00000409417 CFAP61Q8NHU2 1237 aa19.28■□□□□ 0.68
PDLIM2-207ENST00000409417 IFT81Q8WYA0 676 aa19.28■□□□□ 0.68
PDLIM2-207ENST00000409417 INPP5DQ92835 1189 aa19.28■□□□□ 0.68
PDLIM2-207ENST00000409417 FOPNLQ96NB1 174 aa19.28■□□□□ 0.68
PDLIM2-207ENST00000409417 NDNQ99608 321 aa19.28■□□□□ 0.68
PDLIM2-207ENST00000409417 GPR21Q99679 349 aa19.28■□□□□ 0.68
PDLIM2-207ENST00000409417 SLC30A3Q99726 388 aa19.28■□□□□ 0.68
PDLIM2-207ENST00000409417 TSPYL1Q9H0U9 437 aa19.28■□□□□ 0.68
PDLIM2-207ENST00000409417 NSMCE4AQ9NXX6 385 aa19.28■□□□□ 0.68
PDLIM2-207ENST00000409417 PSAT1Q9Y617 370 aa19.28■□□□□ 0.68
PDLIM2-207ENST00000409417 A8MU76 341 aa19.28■□□□□ 0.68
PDLIM2-207ENST00000409417 KDM1AO60341 852 aa19.28■□□□□ 0.68
PDLIM2-207ENST00000409417 ITGA2BP08514 1039 aa19.28■□□□□ 0.68
PDLIM2-207ENST00000409417 JMJD7P0C870 316 aa19.28■□□□□ 0.68
PDLIM2-207ENST00000409417 HGFP14210 728 aa19.28■□□□□ 0.68
PDLIM2-207ENST00000409417 CD9P21926 228 aa19.28■□□□□ 0.68
PDLIM2-207ENST00000409417 RBMS1P29558 406 aaKnown RBP19.28■□□□□ 0.68
PDLIM2-207ENST00000409417 GPX6P59796 221 aa19.28■□□□□ 0.68
PDLIM2-207ENST00000409417 ARMC6Q6NXE6 501 aa19.28■□□□□ 0.68
PDLIM2-207ENST00000409417 CEP128Q6ZU80 1094 aa19.28■□□□□ 0.68
PDLIM2-207ENST00000409417 DCUN1D3Q8IWE4 304 aa19.28■□□□□ 0.68
PDLIM2-207ENST00000409417 CD200R1Q8TD46 325 aa19.28■□□□□ 0.68
PDLIM2-207ENST00000409417 LRRC4CQ9HCJ2 640 aa19.28■□□□□ 0.68
PDLIM2-207ENST00000409417 TAS2R13Q9NYV9 303 aa19.28■□□□□ 0.68
PDLIM2-207ENST00000409417 TDRKHQ9Y2W6 561 aaKnown RBP19.28■□□□□ 0.68
PDLIM2-207ENST00000409417 AGRPO00253 132 aa19.27■□□□□ 0.67
PDLIM2-207ENST00000409417 MATN2O00339 956 aa19.27■□□□□ 0.67
PDLIM2-207ENST00000409417 SPAG6O75602 509 aa19.27■□□□□ 0.67
PDLIM2-207ENST00000409417 TNFSF15O95150 251 aa19.27■□□□□ 0.67
PDLIM2-207ENST00000409417 MATN4O95460 622 aa19.27■□□□□ 0.67
PDLIM2-207ENST00000409417 TPBGLP0DKB5 382 aa19.27■□□□□ 0.67
PDLIM2-207ENST00000409417 ABCG1P45844 678 aa19.27■□□□□ 0.67
PDLIM2-207ENST00000409417 PPP1CAP62136 330 aa19.27■□□□□ 0.67
PDLIM2-207ENST00000409417 TIAL1Q01085 375 aaKnown RBP eCLIP19.27■□□□□ 0.67
PDLIM2-207ENST00000409417 PRKAA1Q13131 559 aa19.27■□□□□ 0.67
PDLIM2-207ENST00000409417 CUL1Q13616 776 aa19.27■□□□□ 0.67
PDLIM2-207ENST00000409417 RBM20Q5T481 1227 aaKnown RBP19.27■□□□□ 0.67
PDLIM2-207ENST00000409417 UGT3A1Q6NUS8 523 aa19.27■□□□□ 0.67
PDLIM2-207ENST00000409417 FAM92BQ6ZTR7 304 aa19.27■□□□□ 0.67
PDLIM2-207ENST00000409417 NEK10Q6ZWH5 1172 aa19.27■□□□□ 0.67
PDLIM2-207ENST00000409417 PRSS42Q7Z5A4 293 aa19.27■□□□□ 0.67
PDLIM2-207ENST00000409417 STRA8Q7Z7C7 330 aa19.27■□□□□ 0.67
PDLIM2-207ENST00000409417 CDKL2Q92772 493 aa19.27■□□□□ 0.67
PDLIM2-207ENST00000409417 CD180Q99467 661 aa19.27■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms