RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 MPIP34949 423 aa24.62■■□□□ 1.53
SPIRE1-202ENST00000409402 CCR10P46092 362 aa24.62■■□□□ 1.53
SPIRE1-202ENST00000409402 NR1H2P55055 460 aa24.62■■□□□ 1.53
SPIRE1-202ENST00000409402 PRAMEF14Q5SWL7 426 aa24.62■■□□□ 1.53
SPIRE1-202ENST00000409402 PRAMEF13Q5VWM6 474 aa24.62■■□□□ 1.53
SPIRE1-202ENST00000409402 HFE2Q6ZVN8 426 aa24.62■■□□□ 1.53
SPIRE1-202ENST00000409402 IQCKQ8N0W5 287 aa24.62■■□□□ 1.53
SPIRE1-202ENST00000409402 PGAM4Q8N0Y7 254 aa24.62■■□□□ 1.53
SPIRE1-202ENST00000409402 SLC35F5Q8WV83 523 aa24.62■■□□□ 1.53
SPIRE1-202ENST00000409402 SEC24AO95486 1093 aa24.62■■□□□ 1.53
SPIRE1-202ENST00000409402 SLC26A3P40879 764 aa24.62■■□□□ 1.53
SPIRE1-202ENST00000409402 CLCNKAP51800 687 aa24.62■■□□□ 1.53
SPIRE1-202ENST00000409402 MLLT6P55198 1093 aaPredicted RBP24.62■■□□□ 1.53
SPIRE1-202ENST00000409402 NFATC2Q13469 925 aa24.62■■□□□ 1.53
SPIRE1-202ENST00000409402 VWA5B1Q5TIE3 1220 aa24.62■■□□□ 1.53
SPIRE1-202ENST00000409402 GALNT5Q7Z7M9 940 aa24.62■■□□□ 1.53
SPIRE1-202ENST00000409402 EBF3Q9H4W6 596 aa24.62■■□□□ 1.53
SPIRE1-202ENST00000409402 PNO1Q9NRX1 252 aaKnown RBP24.62■■□□□ 1.53
SPIRE1-202ENST00000409402 GATMP50440 423 aa24.62■■□□□ 1.53
SPIRE1-202ENST00000409402 NCBP2P52298 156 aaKnown RBP eCLIP24.62■■□□□ 1.53
SPIRE1-202ENST00000409402 MTERF1Q99551 399 aaKnown RBP24.62■■□□□ 1.53
SPIRE1-202ENST00000409402 KLHL31Q9H511 634 aa24.62■■□□□ 1.53
SPIRE1-202ENST00000409402 ALG2Q9H553 416 aa24.62■■□□□ 1.53
SPIRE1-202ENST00000409402 CLCA3PQ9Y6N3 262 aa24.62■■□□□ 1.53
SPIRE1-202ENST00000409402 ZBTB22O15209 634 aa24.62■■□□□ 1.53
SPIRE1-202ENST00000409402 SLC8B1Q6J4K2 584 aa24.62■■□□□ 1.53
SPIRE1-202ENST00000409402 C22orf39Q6P5X5 142 aa24.62■■□□□ 1.53
SPIRE1-202ENST00000409402 NUP54Q7Z3B4 507 aa24.62■■□□□ 1.53
SPIRE1-202ENST00000409402 ZNF781Q8N8C0 355 aa24.62■■□□□ 1.53
SPIRE1-202ENST00000409402 CAMKVQ8NCB2 501 aa24.62■■□□□ 1.53
SPIRE1-202ENST00000409402 COMMD9Q9P000 198 aa24.62■■□□□ 1.53
SPIRE1-202ENST00000409402 C2orf71A6NGG8 1288 aa24.61■■□□□ 1.53
SPIRE1-202ENST00000409402 J3KR12 359 aa24.61■■□□□ 1.53
SPIRE1-202ENST00000409402 IL7RP16871 459 aa24.61■■□□□ 1.53
SPIRE1-202ENST00000409402 GRK6P43250 576 aa24.61■■□□□ 1.53
SPIRE1-202ENST00000409402 FOLH1Q04609 750 aa24.61■■□□□ 1.53
SPIRE1-202ENST00000409402 PCDH1Q08174 1060 aa24.61■■□□□ 1.53
SPIRE1-202ENST00000409402 AP4B1Q9Y6B7 739 aa24.61■■□□□ 1.53
SPIRE1-202ENST00000409402 ADAMDEC1O15204 470 aa24.61■■□□□ 1.53
SPIRE1-202ENST00000409402 PCDH7O60245 1069 aa24.61■■□□□ 1.53
SPIRE1-202ENST00000409402 MMP20O60882 483 aa24.61■■□□□ 1.53
SPIRE1-202ENST00000409402 MSX2P35548 267 aaPredicted RBP24.61■■□□□ 1.53
SPIRE1-202ENST00000409402 CCNHP51946 323 aaPredicted RBP24.61■■□□□ 1.53
SPIRE1-202ENST00000409402 OLR1P78380 273 aa24.61■■□□□ 1.53
SPIRE1-202ENST00000409402 DPY19L1Q2PZI1 675 aa24.61■■□□□ 1.53
SPIRE1-202ENST00000409402 CDKN2AIPNLQ96HQ2 116 aa24.61■■□□□ 1.53
SPIRE1-202ENST00000409402 CLK4Q9HAZ1 481 aaKnown RBP24.61■■□□□ 1.53
SPIRE1-202ENST00000409402 RASSF1Q9NS23 344 aa24.61■■□□□ 1.53
SPIRE1-202ENST00000409402 IRAK3Q9Y616 596 aa24.61■■□□□ 1.53
SPIRE1-202ENST00000409402 PSMD11O00231 422 aa24.61■■□□□ 1.53
SPIRE1-202ENST00000409402 PRDX6P30041 224 aa24.61■■□□□ 1.53
SPIRE1-202ENST00000409402 SLBPQ14493 270 aaKnown RBP eCLIP24.61■■□□□ 1.53
SPIRE1-202ENST00000409402 B3GNT6Q6ZMB0 384 aa24.61■■□□□ 1.53
SPIRE1-202ENST00000409402 DCAKDQ8WVC6 231 aa24.61■■□□□ 1.53
SPIRE1-202ENST00000409402 ROPN1LQ96C74 230 aa24.61■■□□□ 1.53
SPIRE1-202ENST00000409402 GMLQ99445 158 aa24.61■■□□□ 1.53
SPIRE1-202ENST00000409402 TMEM138Q9NPI0 162 aa24.61■■□□□ 1.53
SPIRE1-202ENST00000409402 OR51F1A6NGY5 319 aa24.61■■□□□ 1.53
SPIRE1-202ENST00000409402 STX16-NPEPL1H3BU86 382 aa24.61■■□□□ 1.53
SPIRE1-202ENST00000409402 STX16O14662 325 aa24.61■■□□□ 1.53
SPIRE1-202ENST00000409402 IL1RAPQ9NPH3 570 aa24.61■■□□□ 1.53
SPIRE1-202ENST00000409402 TTC24A2A3L6 582 aaPredicted RBP24.61■■□□□ 1.53
SPIRE1-202ENST00000409402 LYNP07948 512 aa24.61■■□□□ 1.53
SPIRE1-202ENST00000409402 MS4A13Q5J8X5 152 aa24.61■■□□□ 1.53
SPIRE1-202ENST00000409402 PDE12Q6L8Q7 609 aaKnown RBP24.61■■□□□ 1.53
SPIRE1-202ENST00000409402 DUSP26Q9BV47 211 aa24.61■■□□□ 1.53
SPIRE1-202ENST00000409402 SQORQ9Y6N5 450 aa24.61■■□□□ 1.53
SPIRE1-202ENST00000409402 XIAPP98170 497 aa24.6■■□□□ 1.53
SPIRE1-202ENST00000409402 PAOXQ6QHF9 649 aa24.6■■□□□ 1.53
SPIRE1-202ENST00000409402 PQLC1Q8N2U9 271 aa24.6■■□□□ 1.53
SPIRE1-202ENST00000409402 TMEM109Q9BVC6 243 aa24.6■■□□□ 1.53
SPIRE1-202ENST00000409402 C12orf65Q9H3J6 166 aaKnown RBP24.6■■□□□ 1.53
SPIRE1-202ENST00000409402 SLC30A6Q6NXT4 461 aa24.6■■□□□ 1.53
SPIRE1-202ENST00000409402 DCAF4L2Q8NA75 395 aa24.6■■□□□ 1.53
SPIRE1-202ENST00000409402 TSEN15Q8WW01 171 aaKnown RBP24.6■■□□□ 1.53
SPIRE1-202ENST00000409402 PRORSD1PA6NEY8 169 aa24.6■■□□□ 1.53
SPIRE1-202ENST00000409402 PITPNM1O00562 1244 aa24.6■■□□□ 1.53
SPIRE1-202ENST00000409402 IL1R2P27930 398 aa24.6■■□□□ 1.53
SPIRE1-202ENST00000409402 NFKB2Q00653 900 aa24.6■■□□□ 1.53
SPIRE1-202ENST00000409402 CLNKQ7Z7G1 428 aa24.6■■□□□ 1.53
SPIRE1-202ENST00000409402 TMEM145Q8NBT3 493 aa24.6■■□□□ 1.53
SPIRE1-202ENST00000409402 FAM81AQ8TBF8 368 aa24.6■■□□□ 1.53
SPIRE1-202ENST00000409402 RGMAQ96B86 450 aa24.6■■□□□ 1.53
SPIRE1-202ENST00000409402 HAT1O14929 419 aa24.6■■□□□ 1.53
SPIRE1-202ENST00000409402 IDH3BO43837 385 aa24.6■■□□□ 1.53
SPIRE1-202ENST00000409402 NIPSNAP2O75323 286 aa24.6■■□□□ 1.53
SPIRE1-202ENST00000409402 UAP1L1Q3KQV9 507 aa24.6■■□□□ 1.53
SPIRE1-202ENST00000409402 CMASQ8NFW8 434 aaPredicted RBP24.6■■□□□ 1.53
SPIRE1-202ENST00000409402 LMX1AQ8TE12 382 aa24.6■■□□□ 1.53
SPIRE1-202ENST00000409402 SMOQ99835 787 aa24.6■■□□□ 1.53
SPIRE1-202ENST00000409402 DUOX1Q9NRD9 1551 aa24.6■■□□□ 1.53
SPIRE1-202ENST00000409402 M0R2N6 131 aa24.59■■□□□ 1.53
SPIRE1-202ENST00000409402 MTX2O75431 263 aa24.59■■□□□ 1.53
SPIRE1-202ENST00000409402 GALTP07902 379 aa24.59■■□□□ 1.53
SPIRE1-202ENST00000409402 DDX59Q5T1V6 619 aaKnown RBP eCLIP24.59■■□□□ 1.53
SPIRE1-202ENST00000409402 RNF31Q96EP0 1072 aa24.59■■□□□ 1.53
SPIRE1-202ENST00000409402 NDC1Q9BTX1 674 aa24.59■■□□□ 1.53
SPIRE1-202ENST00000409402 NOL6Q9H6R4 1146 aaKnown RBP24.59■■□□□ 1.53
SPIRE1-202ENST00000409402 IQCMA0A1B0GVH7 501 aa24.59■■□□□ 1.53
SPIRE1-202ENST00000409402 PDX1P52945 283 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms