RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 CELA2BP08218 269 aaPredicted RBP16.42■□□□□ 0.22
SSB-202ENST00000409333 CYP2A7P20853 494 aa16.42■□□□□ 0.22
SSB-202ENST00000409333 ARRB2P32121 409 aa16.42■□□□□ 0.22
SSB-202ENST00000409333 ACTR1BP42025 376 aa16.42■□□□□ 0.22
SSB-202ENST00000409333 SEC24CP53992 1094 aa16.42■□□□□ 0.22
SSB-202ENST00000409333 NAGLUP54802 743 aa16.42■□□□□ 0.22
SSB-202ENST00000409333 NXPH1P58417 271 aa16.42■□□□□ 0.22
SSB-202ENST00000409333 DNAJB13P59910 316 aa16.42■□□□□ 0.22
SSB-202ENST00000409333 ACTR1AP61163 376 aa16.42■□□□□ 0.22
SSB-202ENST00000409333 CLCA4Q14CN2 919 aa16.42■□□□□ 0.22
SSB-202ENST00000409333 C18orf21Q32NC0 220 aaPredicted RBP16.42■□□□□ 0.22
SSB-202ENST00000409333 CAPRIN2Q6IMN6 1127 aaKnown RBP16.42■□□□□ 0.22
SSB-202ENST00000409333 RPS27LQ71UM5 84 aaKnown RBP16.42■□□□□ 0.22
SSB-202ENST00000409333 CEP68Q76N32 757 aa16.42■□□□□ 0.22
SSB-202ENST00000409333 TRIM42Q8IWZ5 723 aa16.42■□□□□ 0.22
SSB-202ENST00000409333 PDPRQ8NCN5 879 aa16.42■□□□□ 0.22
SSB-202ENST00000409333 ZBTB44Q8NCP5 570 aa16.42■□□□□ 0.22
SSB-202ENST00000409333 CCDC126Q96EE4 140 aa16.42■□□□□ 0.22
SSB-202ENST00000409333 EGFL8Q99944 293 aa16.42■□□□□ 0.22
SSB-202ENST00000409333 C20orf27Q9GZN8 174 aa16.42■□□□□ 0.22
SSB-202ENST00000409333 ZNF395Q9H8N7 513 aaPredicted RBP16.42■□□□□ 0.22
SSB-202ENST00000409333 SLCO1B3Q9NPD5 702 aa16.42■□□□□ 0.22
SSB-202ENST00000409333 ARL15Q9NXU5 204 aa16.42■□□□□ 0.22
SSB-202ENST00000409333 TBC1D29Q9UFV1 150 aa16.42■□□□□ 0.22
SSB-202ENST00000409333 RALGAPA1Q6GYQ0 2036 aa16.42■□□□□ 0.22
SSB-202ENST00000409333 PDZK1P1A8MUH7 402 aa16.41■□□□□ 0.22
SSB-202ENST00000409333 KLF11O14901 512 aa16.41■□□□□ 0.22
SSB-202ENST00000409333 VILLO15195 856 aa16.41■□□□□ 0.22
SSB-202ENST00000409333 C1orf105O95561 183 aa16.41■□□□□ 0.22
SSB-202ENST00000409333 EML2O95834 649 aa16.41■□□□□ 0.22
SSB-202ENST00000409333 CATP04040 527 aaKnown RBP16.41■□□□□ 0.22
SSB-202ENST00000409333 SERPINE1P05121 402 aa16.41■□□□□ 0.22
SSB-202ENST00000409333 JUNDP17535 347 aa16.41■□□□□ 0.22
SSB-202ENST00000409333 CNR2P34972 360 aa16.41■□□□□ 0.22
SSB-202ENST00000409333 CCR10P46092 362 aa16.41■□□□□ 0.22
SSB-202ENST00000409333 AGTR2P50052 363 aa16.41■□□□□ 0.22
SSB-202ENST00000409333 DUS1LQ6P1R4 473 aaKnown RBP16.41■□□□□ 0.22
SSB-202ENST00000409333 UNC5DQ6UXZ4 953 aa16.41■□□□□ 0.22
SSB-202ENST00000409333 ATG14Q6ZNE5 492 aa16.41■□□□□ 0.22
SSB-202ENST00000409333 FAM47EQ6ZV65 393 aa16.41■□□□□ 0.22
SSB-202ENST00000409333 RAB3IL1Q8TBN0 382 aa16.41■□□□□ 0.22
SSB-202ENST00000409333 SREK1Q8WXA9 508 aaKnown RBP16.41■□□□□ 0.22
SSB-202ENST00000409333 TFGQ92734 400 aaPredicted RBP16.41■□□□□ 0.22
SSB-202ENST00000409333 ESAMQ96AP7 390 aa16.41■□□□□ 0.22
SSB-202ENST00000409333 ZC3H10Q96K80 434 aaKnown RBP16.41■□□□□ 0.22
SSB-202ENST00000409333 ZNF317Q96PQ6 595 aaPredicted RBP16.41■□□□□ 0.22
SSB-202ENST00000409333 INSM2Q96T92 566 aaPredicted RBP16.41■□□□□ 0.22
SSB-202ENST00000409333 APOBEC3BQ9UH17 382 aaKnown RBP16.41■□□□□ 0.22
SSB-202ENST00000409333 PILRBQ9UKJ0 227 aa16.41■□□□□ 0.22
SSB-202ENST00000409333 ASF1AQ9Y294 204 aa16.41■□□□□ 0.22
SSB-202ENST00000409333 ASB1Q9Y576 335 aa16.41■□□□□ 0.22
SSB-202ENST00000409333 SNRNP200O75643 2136 aaKnown RBP16.41■□□□□ 0.22
SSB-202ENST00000409333 IFRD1O00458 451 aaPredicted RBP16.41■□□□□ 0.22
SSB-202ENST00000409333 ITM2AO43736 263 aa16.41■□□□□ 0.22
SSB-202ENST00000409333 LYPLA1O75608 230 aaPredicted RBP16.41■□□□□ 0.22
SSB-202ENST00000409333 S100BP04271 92 aaPredicted RBP16.41■□□□□ 0.22
SSB-202ENST00000409333 HIST1H2AGP0C0S8 130 aaPredicted RBP16.41■□□□□ 0.22
SSB-202ENST00000409333 NME1P15531 152 aaKnown RBP16.41■□□□□ 0.22
SSB-202ENST00000409333 HIST1H2ADP20671 130 aa16.41■□□□□ 0.22
SSB-202ENST00000409333 MAP4P27816 1152 aaKnown RBP16.41■□□□□ 0.22
SSB-202ENST00000409333 EEF1DP29692 281 aaKnown RBP16.41■□□□□ 0.22
SSB-202ENST00000409333 MAPK9P45984 424 aa16.41■□□□□ 0.22
SSB-202ENST00000409333 BLKP51451 505 aa16.41■□□□□ 0.22
SSB-202ENST00000409333 ALDH18A1P54886 795 aaKnown RBP16.41■□□□□ 0.22
SSB-202ENST00000409333 C21orf59P57076 290 aa16.41■□□□□ 0.22
SSB-202ENST00000409333 HERVK_113P63132 956 aa16.41■□□□□ 0.22
SSB-202ENST00000409333 STX3Q13277 289 aa16.41■□□□□ 0.22
SSB-202ENST00000409333 SETDB1Q15047 1291 aa16.41■□□□□ 0.22
SSB-202ENST00000409333 ZNF678Q5SXM1 525 aa16.41■□□□□ 0.22
SSB-202ENST00000409333 ATG16L1Q676U5 607 aa16.41■□□□□ 0.22
SSB-202ENST00000409333 LRRC34Q8IZ02 419 aa16.41■□□□□ 0.22
SSB-202ENST00000409333 CCNYL1Q8N7R7 359 aa16.41■□□□□ 0.22
SSB-202ENST00000409333 PHC3Q8NDX5 983 aa16.41■□□□□ 0.22
SSB-202ENST00000409333 OR5AR1Q8NGP9 310 aa16.41■□□□□ 0.22
SSB-202ENST00000409333 MCOLN3Q8TDD5 553 aa16.41■□□□□ 0.22
SSB-202ENST00000409333 GPBAR1Q8TDU6 330 aa16.41■□□□□ 0.22
SSB-202ENST00000409333 RHBDF1Q96CC6 855 aa16.41■□□□□ 0.22
SSB-202ENST00000409333 L3HYPDHQ96EM0 354 aa16.41■□□□□ 0.22
SSB-202ENST00000409333 HIST1H2AHQ96KK5 128 aa16.41■□□□□ 0.22
SSB-202ENST00000409333 C12orf66Q96MD2 445 aa16.41■□□□□ 0.22
SSB-202ENST00000409333 HIST1H2AJQ99878 128 aa16.41■□□□□ 0.22
SSB-202ENST00000409333 H2AFJQ9BTM1 129 aa16.41■□□□□ 0.22
SSB-202ENST00000409333 LRRC61Q9BV99 259 aa16.41■□□□□ 0.22
SSB-202ENST00000409333 ERVK-6Q9BXR3 956 aa16.41■□□□□ 0.22
SSB-202ENST00000409333 COL25A1Q9BXS0 654 aaPredicted RBP16.41■□□□□ 0.22
SSB-202ENST00000409333 SCHIP1Q9P0W5 487 aaPredicted RBP16.41■□□□□ 0.22
SSB-202ENST00000409333 TMCO1Q9UM00 188 aa16.41■□□□□ 0.22
SSB-202ENST00000409333 A0A1B0GTW7 788 aa16.4■□□□□ 0.22
SSB-202ENST00000409333 A0A1B0GVT2 93 aa16.4■□□□□ 0.22
SSB-202ENST00000409333 OR52A4PA6NMU1 304 aa16.4■□□□□ 0.22
SSB-202ENST00000409333 STX16-NPEPL1H3BU86 382 aa16.4■□□□□ 0.22
SSB-202ENST00000409333 STX16O14662 325 aa16.4■□□□□ 0.22
SSB-202ENST00000409333 TAPBPO15533 448 aa16.4■□□□□ 0.22
SSB-202ENST00000409333 CSF2P04141 144 aa16.4■□□□□ 0.22
SSB-202ENST00000409333 VIMP08670 466 aaKnown RBP16.4■□□□□ 0.22
SSB-202ENST00000409333 ANXA5P08758 320 aa16.4■□□□□ 0.22
SSB-202ENST00000409333 CTSEP14091 401 aa16.4■□□□□ 0.22
SSB-202ENST00000409333 IMPDH1P20839 514 aa16.4■□□□□ 0.22
SSB-202ENST00000409333 AP1S2P56377 157 aa16.4■□□□□ 0.22
SSB-202ENST00000409333 ILF3Q12906 894 aaKnown RBP eCLIP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms