RNA–Protein interactions for RNA: ENST00000404603.5

SNRPD3-203, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 5

Gene SNRPD3, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-203ENST00000404603 LRP4O75096 1905 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 PI4KAP42356 2102 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 A6NCN8 305 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 SIGLEC6O43699 453 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 RFPL3O75679 317 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 MATN4O95460 622 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 FUCA1P04066 466 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 S100BP04271 92 aaPredicted RBP8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 GSTA1P08263 222 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 RBP1P09455 135 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 CD59P13987 128 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 KRT15P19012 456 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 SAT1P21673 171 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 RPL10P27635 214 aaKnown RBP8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 SLC19A1P41440 591 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 PPM1FP49593 454 aaPredicted RBP8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 HNMTP50135 292 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 NAA20P61599 178 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 GPS2Q13227 327 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 GBX1Q14549 363 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 TRIP6Q15654 476 aaKnown RBP8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 ZKSCAN8Q15776 578 aaPredicted RBP8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 SEPT7Q16181 437 aaKnown RBP8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 RPE65Q16518 533 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 ZNF658BQ4V348 819 aaPredicted RBP8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 PRAMEF14Q5SWL7 426 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 MROH9Q5TGP6 573 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 METTL2BQ6P1Q9 378 aaKnown RBP8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 TIFABQ6ZNK6 161 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 TMEM26Q6ZUK4 368 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 HDXQ7Z353 690 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 ZNF438Q7Z4V0 828 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 PIP4P1Q86T03 277 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 OOSP2Q86WS3 158 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 GATAD2AQ86YP4 633 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 PLXDC1Q8IUK5 500 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 SLC35F3Q8IY50 421 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 GSPT2Q8IYD1 628 aaKnown RBP8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 NAGSQ8N159 534 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 DCLK2Q8N568 766 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 SLC37A2Q8TED4 501 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 ISL2Q96A47 359 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 LINGO1Q96FE5 620 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 ZDHHC12Q96GR4 267 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 CD180Q99467 661 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 NDNQ99608 321 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 MCMBPQ9BTE3 642 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 DHRS4Q9BTZ2 278 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 DERL2Q9GZP9 239 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 IQCGQ9H095 443 aaKnown RBP8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 WWP1Q9H0M0 922 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 PCBD2Q9H0N5 130 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 TCEAL2Q9H3H9 227 aaPredicted RBP8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 TFB2MQ9H5Q4 396 aaKnown RBP8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 CNOT10Q9H9A5 744 aaKnown RBP8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 PARVBQ9HBI1 364 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 SLC40A1Q9NP59 571 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 PRDM8Q9NQV8 689 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 INTS7Q9NVH2 962 aaKnown RBP8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 UCKL1Q9NWZ5 548 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 KCNK4Q9NYG8 393 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 SPATA7Q9P0W8 599 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 SIRPGQ9P1W8 387 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 LRIT1Q9P2V4 623 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 FAM8A1Q9UBU6 413 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 SLC23A2Q9UGH3 650 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 PSAT1Q9Y617 370 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 PRSS21Q9Y6M0 314 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 DMXL1Q9Y485 3027 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 PLXNB3Q9ULL4 1909 aa8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 RIF1Q5UIP0 2472 aaKnown RBP8.17□□□□□ -1.1
SNRPD3-203ENST00000404603 CXorf49A8MYA2 514 aaPredicted RBP8.16□□□□□ -1.1
SNRPD3-203ENST00000404603 TOX3O15405 576 aaPredicted RBP8.16□□□□□ -1.1
SNRPD3-203ENST00000404603 SH3BP5O60239 455 aa8.16□□□□□ -1.1
SNRPD3-203ENST00000404603 NOBOXO60393 691 aa8.16□□□□□ -1.1
SNRPD3-203ENST00000404603 PSIP1O75475 530 aaKnown RBP8.16□□□□□ -1.1
SNRPD3-203ENST00000404603 IPO13O94829 963 aaKnown RBP8.16□□□□□ -1.1
SNRPD3-203ENST00000404603 UBXN7O94888 489 aa8.16□□□□□ -1.1
SNRPD3-203ENST00000404603 CCNDBP1O95273 360 aa8.16□□□□□ -1.1
SNRPD3-203ENST00000404603 MT-ND3P03897 115 aa8.16□□□□□ -1.1
SNRPD3-203ENST00000404603 LTA4HP09960 611 aaKnown RBP8.16□□□□□ -1.1
SNRPD3-203ENST00000404603 AMD1P17707 334 aa8.16□□□□□ -1.1
SNRPD3-203ENST00000404603 ACADLP28330 430 aa8.16□□□□□ -1.1
SNRPD3-203ENST00000404603 GABRB3P28472 473 aa8.16□□□□□ -1.1
SNRPD3-203ENST00000404603 CCT5P48643 541 aa8.16□□□□□ -1.1
SNRPD3-203ENST00000404603 RAB28P51157 221 aa8.16□□□□□ -1.1
SNRPD3-203ENST00000404603 UBE2IP63279 158 aaKnown RBP8.16□□□□□ -1.1
SNRPD3-203ENST00000404603 CDKL1Q00532 357 aa8.16□□□□□ -1.1
SNRPD3-203ENST00000404603 EP300Q09472 2414 aaPredicted RBP8.16□□□□□ -1.1
SNRPD3-203ENST00000404603 TP53BP1Q12888 1972 aaPredicted RBP8.16□□□□□ -1.1
SNRPD3-203ENST00000404603 TRA2AQ13595 282 aaKnown RBP eCLIP8.16□□□□□ -1.1
SNRPD3-203ENST00000404603 PUM1Q14671 1186 aaKnown RBP eCLIP8.16□□□□□ -1.1
SNRPD3-203ENST00000404603 ACAP2Q15057 778 aa8.16□□□□□ -1.1
SNRPD3-203ENST00000404603 SMAD1Q15797 465 aaKnown RBP8.16□□□□□ -1.1
SNRPD3-203ENST00000404603 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.16□□□□□ -1.1
SNRPD3-203ENST00000404603 ANKS6Q68DC2 871 aa8.16□□□□□ -1.1
SNRPD3-203ENST00000404603 ZNF549Q6P9A3 640 aa8.16□□□□□ -1.1
SNRPD3-203ENST00000404603 WDR74Q6RFH5 385 aaPredicted RBP8.16□□□□□ -1.1
SNRPD3-203ENST00000404603 KRT222Q8N1A0 295 aa8.16□□□□□ -1.1
SNRPD3-203ENST00000404603 CACTIN-AS1Q8N1I8 211 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms