RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 VWA3BQ502W6 1294 aa8.94□□□□□ -0.98
NUP43-204ENST00000403890 ZFYVE27Q5T4F4 411 aa8.94□□□□□ -0.98
NUP43-204ENST00000403890 METRNLQ641Q3 311 aa8.94□□□□□ -0.98
NUP43-204ENST00000403890 ALG1LQ6GMV1 187 aa8.94□□□□□ -0.98
NUP43-204ENST00000403890 KIRREL2Q6UWL6 708 aa8.94□□□□□ -0.98
NUP43-204ENST00000403890 FAM83HQ6ZRV2 1179 aaPredicted RBP8.94□□□□□ -0.98
NUP43-204ENST00000403890 CDHR3Q6ZTQ4 885 aa8.94□□□□□ -0.98
NUP43-204ENST00000403890 LRRC49Q8IUZ0 686 aa8.94□□□□□ -0.98
NUP43-204ENST00000403890 SVOPQ8N4V2 548 aa8.94□□□□□ -0.98
NUP43-204ENST00000403890 BEND7Q8N7W2 519 aaPredicted RBP8.94□□□□□ -0.98
NUP43-204ENST00000403890 GDAP1Q8TB36 358 aa8.94□□□□□ -0.98
NUP43-204ENST00000403890 BRSK1Q8TDC3 778 aa8.94□□□□□ -0.98
NUP43-204ENST00000403890 HAS2Q92819 552 aa8.94□□□□□ -0.98
NUP43-204ENST00000403890 VPS50Q96JG6 964 aa8.94□□□□□ -0.98
NUP43-204ENST00000403890 INSM2Q96T92 566 aaPredicted RBP8.94□□□□□ -0.98
NUP43-204ENST00000403890 ADGRE3Q9BY15 652 aa8.94□□□□□ -0.98
NUP43-204ENST00000403890 PITPNM3Q9BZ71 974 aa8.94□□□□□ -0.98
NUP43-204ENST00000403890 CCM2LQ9NUG4 571 aaPredicted RBP8.94□□□□□ -0.98
NUP43-204ENST00000403890 HAUS2Q9NVX0 235 aa8.94□□□□□ -0.98
NUP43-204ENST00000403890 NFKBIL1Q9UBC1 381 aaPredicted RBP8.94□□□□□ -0.98
NUP43-204ENST00000403890 DHCR7Q9UBM7 475 aaKnown RBP8.94□□□□□ -0.98
NUP43-204ENST00000403890 MEMO1Q9Y316 297 aa8.94□□□□□ -0.98
NUP43-204ENST00000403890 DNMT3AQ9Y6K1 912 aaPredicted RBP8.94□□□□□ -0.98
NUP43-204ENST00000403890 COLEC10Q9Y6Z7 277 aa8.94□□□□□ -0.98
NUP43-204ENST00000403890 FOXO6A8MYZ6 492 aa8.93□□□□□ -0.98
NUP43-204ENST00000403890 RNF8O76064 485 aa8.93□□□□□ -0.98
NUP43-204ENST00000403890 PRKCSHP14314 528 aaPredicted RBP8.93□□□□□ -0.98
NUP43-204ENST00000403890 MIPP30301 263 aa8.93□□□□□ -0.98
NUP43-204ENST00000403890 ARL4AP40617 200 aa8.93□□□□□ -0.98
NUP43-204ENST00000403890 FOLH1Q04609 750 aa8.93□□□□□ -0.98
NUP43-204ENST00000403890 NFE2L1Q14494 772 aa8.93□□□□□ -0.98
NUP43-204ENST00000403890 KRT33BQ14525 404 aa8.93□□□□□ -0.98
NUP43-204ENST00000403890 TUBB8Q3ZCM7 444 aa8.93□□□□□ -0.98
NUP43-204ENST00000403890 CYP4V2Q6ZWL3 525 aaPredicted RBP8.93□□□□□ -0.98
NUP43-204ENST00000403890 TMC3Q7Z5M5 1100 aa8.93□□□□□ -0.98
NUP43-204ENST00000403890 BIVMQ86UB2 503 aa8.93□□□□□ -0.98
NUP43-204ENST00000403890 TMEM200AQ86VY9 491 aa8.93□□□□□ -0.98
NUP43-204ENST00000403890 ARRDC2Q8TBH0 407 aa8.93□□□□□ -0.98
NUP43-204ENST00000403890 CA5BP1Q8WTZ4 195 aa8.93□□□□□ -0.98
NUP43-204ENST00000403890 NRGNQ92686 78 aa8.93□□□□□ -0.98
NUP43-204ENST00000403890 NINJ1Q92982 152 aa8.93□□□□□ -0.98
NUP43-204ENST00000403890 ZNF653Q96CK0 615 aa8.93□□□□□ -0.98
NUP43-204ENST00000403890 MAGED4Q96JG8 741 aa8.93□□□□□ -0.98
NUP43-204ENST00000403890 C12orf66Q96MD2 445 aa8.93□□□□□ -0.98
NUP43-204ENST00000403890 VPS35Q96QK1 796 aa8.93□□□□□ -0.98
NUP43-204ENST00000403890 TUBGCP2Q9BSJ2 902 aa8.93□□□□□ -0.98
NUP43-204ENST00000403890 XPO4Q9C0E2 1151 aaKnown RBP8.93□□□□□ -0.98
NUP43-204ENST00000403890 SPRTNQ9H040 489 aaPredicted RBP8.93□□□□□ -0.98
NUP43-204ENST00000403890 KLHL25Q9H0H3 589 aa8.93□□□□□ -0.98
NUP43-204ENST00000403890 WWP1Q9H0M0 922 aa8.93□□□□□ -0.98
NUP43-204ENST00000403890 SRMSQ9H3Y6 488 aa8.93□□□□□ -0.98
NUP43-204ENST00000403890 MRM3Q9HC36 420 aaKnown RBP8.93□□□□□ -0.98
NUP43-204ENST00000403890 TXLNGQ9NUQ3 528 aa8.93□□□□□ -0.98
NUP43-204ENST00000403890 RBM22Q9NW64 420 aaKnown RBP eCLIP8.93□□□□□ -0.98
NUP43-204ENST00000403890 PLA2G3Q9NZ20 509 aa8.93□□□□□ -0.98
NUP43-204ENST00000403890 AMACRQ9UHK6 382 aa8.93□□□□□ -0.98
NUP43-204ENST00000403890 TMPRSS11EQ9UL52 423 aa8.93□□□□□ -0.98
NUP43-204ENST00000403890 SHOC2Q9UQ13 582 aa8.93□□□□□ -0.98
NUP43-204ENST00000403890 TTLL3Q9Y4R7 772 aa8.93□□□□□ -0.98
NUP43-204ENST00000403890 HS3ST3B1Q9Y662 390 aa8.93□□□□□ -0.98
NUP43-204ENST00000403890 INTS1Q8N201 2190 aaKnown RBP8.93□□□□□ -0.98
NUP43-204ENST00000403890 ATRQ13535 2644 aa8.93□□□□□ -0.98
NUP43-204ENST00000403890 FN1P02751 2386 aaKnown RBP8.92□□□□□ -0.98
NUP43-204ENST00000403890 C17orf113A0A1B0GUU1 675 aa8.92□□□□□ -0.98
NUP43-204ENST00000403890 KIAA1324LA8MWY0 1029 aaPredicted RBP8.92□□□□□ -0.98
NUP43-204ENST00000403890 H3BMH7 237 aa8.92□□□□□ -0.98
NUP43-204ENST00000403890 ZSCAN9O15535 394 aaPredicted RBP8.92□□□□□ -0.98
NUP43-204ENST00000403890 PMPCBO75439 489 aa8.92□□□□□ -0.98
NUP43-204ENST00000403890 MYBL2P10244 700 aa8.92□□□□□ -0.98
NUP43-204ENST00000403890 PVRP15151 417 aa8.92□□□□□ -0.98
NUP43-204ENST00000403890 NDUFS1P28331 727 aa8.92□□□□□ -0.98
NUP43-204ENST00000403890 SERPINB6P35237 376 aa8.92□□□□□ -0.98
NUP43-204ENST00000403890 SOX5P35711 763 aa8.92□□□□□ -0.98
NUP43-204ENST00000403890 ZNF165P49910 485 aa8.92□□□□□ -0.98
NUP43-204ENST00000403890 NIPAL4Q0D2K0 466 aa8.92□□□□□ -0.98
NUP43-204ENST00000403890 CAMK4Q16566 473 aa8.92□□□□□ -0.98
NUP43-204ENST00000403890 Q71RC1 249 aaPredicted RBP8.92□□□□□ -0.98
NUP43-204ENST00000403890 POLNQ7Z5Q5 900 aa8.92□□□□□ -0.98
NUP43-204ENST00000403890 SPPL2CQ8IUH8 684 aa8.92□□□□□ -0.98
NUP43-204ENST00000403890 ZNF655Q8N720 491 aaPredicted RBP8.92□□□□□ -0.98
NUP43-204ENST00000403890 RASGEF1AQ8N9B8 481 aa8.92□□□□□ -0.98
NUP43-204ENST00000403890 OR11G2Q8NGC1 345 aa8.92□□□□□ -0.98
NUP43-204ENST00000403890 LCN9Q8WX39 176 aa8.92□□□□□ -0.98
NUP43-204ENST00000403890 ZNF559Q9BR84 538 aa8.92□□□□□ -0.98
NUP43-204ENST00000403890 ZCCHC2Q9C0B9 1178 aaKnown RBP8.92□□□□□ -0.98
NUP43-204ENST00000403890 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.92□□□□□ -0.98
NUP43-204ENST00000403890 MAGEE1Q9HCI5 957 aa8.92□□□□□ -0.98
NUP43-204ENST00000403890 SLC22A11Q9NSA0 550 aa8.92□□□□□ -0.98
NUP43-204ENST00000403890 SEPT11Q9NVA2 429 aaKnown RBP8.92□□□□□ -0.98
NUP43-204ENST00000403890 ACSL5Q9ULC5 683 aa8.92□□□□□ -0.98
NUP43-204ENST00000403890 ZNF835Q9Y2P0 537 aa8.92□□□□□ -0.98
NUP43-204ENST00000403890 PES1O00541 588 aaKnown RBP8.91□□□□□ -0.98
NUP43-204ENST00000403890 MATN3O15232 486 aa8.91□□□□□ -0.98
NUP43-204ENST00000403890 PRAMEF2O60811 474 aa8.91□□□□□ -0.98
NUP43-204ENST00000403890 WISP2O76076 250 aa8.91□□□□□ -0.98
NUP43-204ENST00000403890 USP1O94782 785 aa8.91□□□□□ -0.98
NUP43-204ENST00000403890 SLC4A1P02730 911 aa8.91□□□□□ -0.98
NUP43-204ENST00000403890 ALBP02768 609 aa8.91□□□□□ -0.98
NUP43-204ENST00000403890 PIRTP0C851 137 aa8.91□□□□□ -0.98
NUP43-204ENST00000403890 ATP1A3P13637 1013 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms