RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 SLC38A7Q9NVC3 462 aa3.68□□□□□ -1.82
HMGB1P17-201ENST00000403495 COQ3Q9NZJ6 369 aa3.68□□□□□ -1.82
HMGB1P17-201ENST00000403495 B3GAT1Q9P2W7 334 aa3.68□□□□□ -1.82
HMGB1P17-201ENST00000403495 POLLQ9UGP5 575 aa3.68□□□□□ -1.82
HMGB1P17-201ENST00000403495 IL17BQ9UHF5 180 aa3.68□□□□□ -1.82
HMGB1P17-201ENST00000403495 POU2F3Q9UKI9 436 aa3.68□□□□□ -1.82
HMGB1P17-201ENST00000403495 A0A1W2PPQ1 181 aa3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 CTAGE9A4FU28 777 aa3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 SLC28A2O43868 658 aa3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 LDLRP01130 860 aa3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 GBAP04062 536 aa3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 H1F0P07305 194 aaKnown RBP3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 CTAGE8P0CG41 777 aa3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 CSF2RAP15509 400 aa3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 EPHA2P29317 976 aa3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 HOXC8P31273 242 aa3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 CTNNA1P35221 906 aaKnown RBP3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 KCNJ1P48048 391 aa3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 SLC9A3P48764 834 aa3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 THBS3P49746 956 aa3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 BMXP51813 675 aa3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 EEF1A2Q05639 463 aaKnown RBP3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 ZNF415Q09FC8 603 aa3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 UGP2Q16851 508 aa3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 MDH1BQ5I0G3 518 aa3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 MFSD12Q6NUT3 480 aa3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 CORO6Q6QEF8 472 aa3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 UNQ6126/PRO20091Q6UXV3 157 aa3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 PACS1Q6VY07 963 aa3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 PLEKHM3Q6ZWE6 761 aa3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 ANO5Q75V66 913 aa3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 CTAGE4Q8IX94 777 aa3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 SIX6OS1Q8N1H7 587 aa3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 PAPD5Q8NDF8 572 aaKnown RBP3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 MOSPD2Q8NHP6 518 aa3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 FGFBP3Q8TAT2 258 aa3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 LNX1Q8TBB1 728 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 UBE2Q2Q8WVN8 375 aa3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 SSMEM1Q8WWF3 244 aa3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 MR1Q95460 341 aa3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 ST6GALNAC6Q969X2 333 aa3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 ARSGQ96EG1 525 aa3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 IL17FQ96PD4 163 aa3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 FEVQ99581 238 aa3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 FERMT1Q9BQL6 677 aa3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 C1QTNF4Q9BXJ3 329 aa3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 VN1R1Q9GZP7 353 aa3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 A4GALTQ9NPC4 353 aa3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 KLHL1Q9NR64 748 aa3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 TBC1D7Q9P0N9 293 aa3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 MTUS1Q9ULD2 1270 aa3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 FAF1Q9UNN5 650 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 GRIP1Q9Y3R0 1128 aa3.67□□□□□ -1.82
HMGB1P17-201ENST00000403495 ANXA2P2A6NMY6 339 aa3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 C15orf62A8K5M9 175 aa3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 PROB1E7EW31 1015 aa3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 H0Y626 953 aa3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 H0YAE9 185 aa3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 BUD23O43709 281 aaKnown RBP3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 WDPCPO95876 746 aa3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 FAM58BPP0C7Q3 252 aa3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 LBPP18428 481 aa3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 NR1D1P20393 614 aa3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 HOXC13P31276 330 aa3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 ZXDBP98169 803 aa3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 COASYQ13057 564 aa3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 FHL1Q13642 323 aa3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 ITGA7Q13683 1181 aa3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 PTK6Q13882 451 aa3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 DUOXA1Q1HG43 343 aa3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 KIF19Q2TAC6 998 aa3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 SYT14P1Q58G82 188 aa3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 ZRANB3Q5FWF4 1079 aa3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 NADSYN1Q6IA69 706 aa3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 FAM109BQ6ICB4 259 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 ZNF852Q6ZMS4 543 aa3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 ZNF517Q6ZMY9 492 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 TUBA1AQ71U36 451 aa3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 SPATA19Q7Z5L4 167 aa3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 RBM23Q86U06 439 aaKnown RBP3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 SNX32Q86XE0 403 aa3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 DNAJC22Q8N4W6 341 aa3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 CPSF7Q8N684 471 aaKnown RBP3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 TRIML1Q8N9V2 468 aa3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 LMNTD1Q8N9Z9 388 aa3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 KCNH5Q8NCM2 988 aa3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 OR11H4Q8NGC9 324 aa3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 NSMAFQ92636 917 aa3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 IGSF21Q96ID5 467 aa3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 CCDC114Q96M63 670 aa3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 SPATA33Q96N06 139 aa3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 ZNF583Q96ND8 569 aa3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 SPAG5Q96R06 1193 aa3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 RAD9AQ99638 391 aa3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 TUBA1CQ9BQE3 449 aa3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 PSD2Q9BQI7 771 aa3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 GTPBP2Q9BX10 602 aaKnown RBP3.66□□□□□ -1.82
HMGB1P17-201ENST00000403495 SLC2A11Q9BYW1 496 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms