RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	CCDC185	Q8N715	623 aa		6.69	□□□□□ -1.34
CEACAM1-208	ENST00000403461	ANKRD53	Q8N9V6	530 aa		6.69	□□□□□ -1.34
CEACAM1-208	ENST00000403461	TEX19	Q8NA77	164 aa		6.69	□□□□□ -1.34
CEACAM1-208	ENST00000403461	GLB1L3	Q8NCI6	653 aa	Predicted RBP	6.69	□□□□□ -1.34
CEACAM1-208	ENST00000403461	CCL4L1	Q8NHW4	92 aa		6.69	□□□□□ -1.34
CEACAM1-208	ENST00000403461	JADE3	Q92613	823 aa		6.69	□□□□□ -1.34
CEACAM1-208	ENST00000403461	NUS1	Q96E22	293 aa		6.69	□□□□□ -1.34
CEACAM1-208	ENST00000403461	C11orf70	Q9BRQ4	267 aa		6.69	□□□□□ -1.34
CEACAM1-208	ENST00000403461	SELENOO	Q9BVL4	669 aa		6.69	□□□□□ -1.34
CEACAM1-208	ENST00000403461	CINP	Q9BW66	212 aa	Predicted RBP	6.69	□□□□□ -1.34
CEACAM1-208	ENST00000403461	GOLGA6A	Q9NYA3	693 aa		6.69	□□□□□ -1.34
CEACAM1-208	ENST00000403461	LHX3	Q9UBR4	397 aa		6.69	□□□□□ -1.34
CEACAM1-208	ENST00000403461	SCOC	Q9UIL1	159 aa		6.69	□□□□□ -1.34
CEACAM1-208	ENST00000403461	VPS4A	Q9UN37	437 aa		6.69	□□□□□ -1.34
CEACAM1-208	ENST00000403461	ATM	Q13315	3056 aa		6.69	□□□□□ -1.34
CEACAM1-208	ENST00000403461	TLN1	Q9Y490	2541 aa	Known RBP	6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	AHCTF1	Q8WYP5	2266 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	IGHV1OR21-1	A0A087WYE8	117 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	CLEC18A	A5D8T8	446 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	C2CD4B	A6NLJ0	364 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	FAM72C	H0Y354	149 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	INPP4B	O15327	924 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	B4GAT1	O43505	415 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	CDC14B	O60729	498 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	TMEM127	O75204	238 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	PRKCG	P05129	697 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	CYP2A6	P11509	494 aa	Predicted RBP	6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	TCN2	P20062	427 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	GPD1	P21695	349 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	MMP8	P22894	467 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	CTSS	P25774	331 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	CD1C	P29017	333 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	CSNK1D	P48730	415 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	RENBP	P51606	427 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	NDST2	P52849	883 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	TPI1	P60174	286 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	AP1S1	P61966	158 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	NOMO3	P69849	1222 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	ABHD18	Q0P651	414 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	RFTN1	Q14699	578 aa	Predicted RBP	6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	CYTH1	Q15438	398 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	DEFB109B	Q30KR1	87 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	FHL5	Q5TD97	284 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	FAM72A	Q5TYM5	149 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	NKAIN2	Q5VXU1	208 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	AFMID	Q63HM1	303 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	ANKS6	Q68DC2	871 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	KCTD16	Q68DU8	428 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	RAET1G	Q6H3X3	334 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	FAM72D	Q6L9T8	149 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	TRNP1	Q6NT89	227 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	PNCK	Q6P2M8	343 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	SCYL2	Q6P3W7	929 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	TMEM71	Q6P5X7	295 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	CLEC18B	Q6UXF7	455 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	DPPA4	Q7L190	304 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	PHLDB2	Q86SQ0	1253 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	SRL	Q86TD4	932 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	TAX1BP1	Q86VP1	789 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	HEATR4	Q86WZ0	1026 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	C17orf82	Q86X59	251 aa	Predicted RBP	6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	FAM72B	Q86X60	149 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	UMODL1-AS1	Q8N2C9	162 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	ESX1	Q8N693	406 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	AVL9	Q8NBF6	648 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	CLEC18C	Q8NCF0	446 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	GPT2	Q8TD30	523 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	STARD8	Q92502	1023 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	SH3KBP1	Q96B97	665 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	GPHA2	Q96T91	129 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	STK33	Q9BYT3	514 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	NDST4	Q9H3R1	872 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	SIX2	Q9NPC8	291 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	PRDM8	Q9NQV8	689 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	SPATS2L	Q9NUQ6	558 aa	Known RBP	6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	ING3	Q9NXR8	418 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	AJAP1	Q9UKB5	411 aa	Predicted RBP	6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	SUFU	Q9UMX1	484 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	NEU3	Q9UQ49	428 aa		6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	UBR5	O95071	2799 aa	Predicted RBP	6.68	□□□□□ -1.34
CEACAM1-208	ENST00000403461	LRRK2	Q5S007	2527 aa		6.67	□□□□□ -1.34
CEACAM1-208	ENST00000403461	EIF3CL	B5ME19	914 aa	Known RBP	6.67	□□□□□ -1.34
CEACAM1-208	ENST00000403461		F8VZ95	297 aa		6.67	□□□□□ -1.34
CEACAM1-208	ENST00000403461	NKX2-8	O15522	239 aa		6.67	□□□□□ -1.34
CEACAM1-208	ENST00000403461	PRAMEF11	O60813	436 aa		6.67	□□□□□ -1.34
CEACAM1-208	ENST00000403461	STK17B	O94768	372 aa		6.67	□□□□□ -1.34
CEACAM1-208	ENST00000403461	SNUPN	O95149	360 aa	Known RBP	6.67	□□□□□ -1.34
CEACAM1-208	ENST00000403461	CALB1	P05937	261 aa		6.67	□□□□□ -1.34
CEACAM1-208	ENST00000403461	PYGL	P06737	847 aa		6.67	□□□□□ -1.34
CEACAM1-208	ENST00000403461	IVL	P07476	585 aa		6.67	□□□□□ -1.34
CEACAM1-208	ENST00000403461	TPM2	P07951	284 aa		6.67	□□□□□ -1.34
CEACAM1-208	ENST00000403461	SLC2A4	P14672	509 aa		6.67	□□□□□ -1.34
CEACAM1-208	ENST00000403461	TEAD1	P28347	426 aa		6.67	□□□□□ -1.34
CEACAM1-208	ENST00000403461	HDAC4	P56524	1084 aa		6.67	□□□□□ -1.34
CEACAM1-208	ENST00000403461	WNT3A	P56704	352 aa		6.67	□□□□□ -1.34
CEACAM1-208	ENST00000403461	CDK3	Q00526	305 aa		6.67	□□□□□ -1.34
CEACAM1-208	ENST00000403461	CDR2	Q01850	454 aa		6.67	□□□□□ -1.34
CEACAM1-208	ENST00000403461	NSUN2	Q08J23	767 aa	Known RBP eCLIP	6.67	□□□□□ -1.34
CEACAM1-208	ENST00000403461	RALGDS	Q12967	914 aa		6.67	□□□□□ -1.34
CEACAM1-208	ENST00000403461	RIN1	Q13671	783 aa		6.67	□□□□□ -1.34

Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms