RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 SMIM18P0DKX4 95 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 VARSP26640 1264 aaKnown RBP10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 ELK4P28324 431 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 CSRP3P50461 194 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 CLCN7P51798 805 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 NAE1Q13564 534 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 SIM2Q14190 667 aaPredicted RBP10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 ACBD5Q5T8D3 534 aaPredicted RBP10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 ENPP6Q6UWR7 440 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 ADGRG5Q8IZF4 528 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 NXPE1Q8N323 547 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 MINDY1Q8N5J2 469 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 ZNF513Q8N8E2 541 aaPredicted RBP10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 BPIFB6Q8NFQ5 453 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 MCOLN3Q8TDD5 553 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 PIH1D2Q8WWB5 315 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 EGLN2Q96KS0 407 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 ZNF382Q96SR6 550 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 BRD9Q9H8M2 597 aa10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 SMPD3Q9NY59 655 aaPredicted RBP10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 RSL24D1Q9UHA3 163 aaKnown RBP10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 TDRD15B5MCY1 1934 aaKnown RBP10.23□□□□□ -0.77
CPSF1P1-201ENST00000397477 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 AQP12BA6NM10 295 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 EVPLLA8MZ36 301 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 LEFTY2O00292 366 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 TGM5O43548 720 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 CLDN9O95484 217 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 CD160O95971 181 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 SERPIND1P05546 499 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 CCT8P50990 548 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 IL5RAQ01344 420 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 TNK2Q07912 1038 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 CHIT1Q13231 466 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 CRTC1Q6UUV9 634 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 AQP12AQ8IXF9 295 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 DTWD1Q8N5C7 304 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 KREMEN2Q8NCW0 462 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 ZNF555Q8NEP9 628 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 PEX13Q92968 403 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 TMBIM1Q969X1 311 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 TCEAL4Q96EI5 215 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 TTLL2Q9BWV7 592 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 RIBC2Q9H4K1 309 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 ARMC7Q9H6L4 198 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 KIF17Q9P2E2 1029 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 SPASTQ9UBP0 616 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 A0A087WXM4 84 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 hCG_2039718K7EN88 272 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 IFRD1O00458 451 aaPredicted RBP10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 OR7A17O14581 309 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 RFXANKO14593 260 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 PER2O15055 1255 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 PGRP06401 933 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 FCGR1AP12314 374 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 GALK1P51570 392 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 C16orf72Q14CZ0 275 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 ARSIQ5FYB1 569 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 ANKRD34AQ69YU3 496 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 OR4F3Q6IEY1 312 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 TRMT11Q7Z4G4 463 aaKnown RBP10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 TRAPPC5Q8IUR0 188 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 TBC1D21Q8IYX1 336 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 TMEM159Q96B96 161 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 ITCHQ96J02 903 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 PANX1Q96RD7 426 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 MAGEE1Q9HCI5 957 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 SLC8A2Q9UPR5 921 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 DGKBQ9Y6T7 804 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 SCAMP1O15126 338 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 TBC1D4O60343 1298 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 TRMUO75648 421 aaKnown RBP10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 COX7A2P14406 83 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 IL7RP16871 459 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 ETV3P41162 512 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 CYP4F3Q08477 520 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 RCAN2Q14206 197 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 ZNF284Q2VY69 593 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 SBSNQ6UWP8 590 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 ABRAXAS1Q6UWZ7 409 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 KLHDC8BQ8IXV7 354 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 FAM86B1Q8N7N1 296 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 SLC47A1Q96FL8 570 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 CD244Q9BZW8 370 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 HPS4Q9NQG7 708 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 AASSQ9UDR5 926 aa10.22□□□□□ -0.77
CPSF1P1-201ENST00000397477 CCL5P13501 91 aa10.21□□□□□ -0.77
CPSF1P1-201ENST00000397477 ACRV1P26436 265 aa10.21□□□□□ -0.77
CPSF1P1-201ENST00000397477 PCSK6P29122 969 aa10.21□□□□□ -0.77
CPSF1P1-201ENST00000397477 NSG1P42857 185 aa10.21□□□□□ -0.77
CPSF1P1-201ENST00000397477 ATP4BP51164 291 aa10.21□□□□□ -0.77
CPSF1P1-201ENST00000397477 TEAD2Q15562 447 aa10.21□□□□□ -0.77
CPSF1P1-201ENST00000397477 INO80DQ53TQ3 878 aaPredicted RBP10.21□□□□□ -0.77
CPSF1P1-201ENST00000397477 LDLRAP1Q5SW96 308 aa10.21□□□□□ -0.77
CPSF1P1-201ENST00000397477 ARTNQ5T4W7 220 aa10.21□□□□□ -0.77
CPSF1P1-201ENST00000397477 GPRC6AQ5T6X5 926 aa10.21□□□□□ -0.77
CPSF1P1-201ENST00000397477 TPGS2Q68CL5 300 aa10.21□□□□□ -0.77
CPSF1P1-201ENST00000397477 FAM180BQ6P0A1 224 aa10.21□□□□□ -0.77
CPSF1P1-201ENST00000397477 C11orf96Q7Z7L8 435 aa10.21□□□□□ -0.77
CPSF1P1-201ENST00000397477 ZSWIM9Q86XI8 627 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms