RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 LOC730098B7Z3J9 87 aa23.29■■□□□ 1.32
PABPN1-202ENST00000397276 UGT2B4P06133 528 aa23.29■■□□□ 1.32
PABPN1-202ENST00000397276 MAPK10P53779 464 aa23.29■■□□□ 1.32
PABPN1-202ENST00000397276 GRAMD4Q6IC98 578 aa23.29■■□□□ 1.32
PABPN1-202ENST00000397276 TMC8Q8IU68 726 aa23.29■■□□□ 1.32
PABPN1-202ENST00000397276 PAIP1Q9H074 479 aaKnown RBP23.29■■□□□ 1.32
PABPN1-202ENST00000397276 TBX21Q9UL17 535 aa23.29■■□□□ 1.32
PABPN1-202ENST00000397276 SLC8A2Q9UPR5 921 aa23.29■■□□□ 1.32
PABPN1-202ENST00000397276 SH3GLB1Q9Y371 365 aa23.29■■□□□ 1.32
PABPN1-202ENST00000397276 CDH23Q9H251 3354 aa23.28■■□□□ 1.32
PABPN1-202ENST00000397276 PLXNA4Q9HCM2 1894 aa23.28■■□□□ 1.32
PABPN1-202ENST00000397276 KRT87PA6NCN2 255 aa23.28■■□□□ 1.32
PABPN1-202ENST00000397276 CCL16O15467 120 aa23.28■■□□□ 1.32
PABPN1-202ENST00000397276 C8AP07357 584 aa23.28■■□□□ 1.32
PABPN1-202ENST00000397276 PTSQ03393 145 aa23.28■■□□□ 1.32
PABPN1-202ENST00000397276 DHRS4L2Q6PKH6 230 aa23.28■■□□□ 1.32
PABPN1-202ENST00000397276 CHST15Q7LFX5 561 aaPredicted RBP23.28■■□□□ 1.32
PABPN1-202ENST00000397276 CLHC1Q8NHS4 586 aa23.28■■□□□ 1.32
PABPN1-202ENST00000397276 HTATIP2Q9BUP3 242 aa23.28■■□□□ 1.32
PABPN1-202ENST00000397276 TRAV19A0A0A6YYK7 116 aa23.28■■□□□ 1.32
PABPN1-202ENST00000397276 H0YJX3 145 aa23.28■■□□□ 1.32
PABPN1-202ENST00000397276 LHCGRP22888 699 aa23.28■■□□□ 1.32
PABPN1-202ENST00000397276 MNX1P50219 401 aaPredicted RBP23.28■■□□□ 1.32
PABPN1-202ENST00000397276 SNRPD1P62314 119 aaKnown RBP23.28■■□□□ 1.32
PABPN1-202ENST00000397276 HSPA14Q0VDF9 509 aa23.28■■□□□ 1.32
PABPN1-202ENST00000397276 TTC33Q6PID6 262 aaPredicted RBP23.28■■□□□ 1.32
PABPN1-202ENST00000397276 OTOP2Q7RTS6 562 aa23.28■■□□□ 1.32
PABPN1-202ENST00000397276 TMEM25Q86YD3 366 aa23.28■■□□□ 1.32
PABPN1-202ENST00000397276 HID1Q8IV36 788 aa23.28■■□□□ 1.32
PABPN1-202ENST00000397276 TRPV3Q8NET8 790 aa23.28■■□□□ 1.32
PABPN1-202ENST00000397276 RC3H2Q9HBD1 1191 aaKnown RBP23.28■■□□□ 1.32
PABPN1-202ENST00000397276 HEBP1Q9NRV9 189 aa23.28■■□□□ 1.32
PABPN1-202ENST00000397276 ZNF490Q9ULM2 529 aaPredicted RBP23.28■■□□□ 1.32
PABPN1-202ENST00000397276 PCDHGA4Q9Y5G9 962 aa23.28■■□□□ 1.32
PABPN1-202ENST00000397276 MTX2O75431 263 aa23.27■■□□□ 1.32
PABPN1-202ENST00000397276 FGF18O76093 207 aa23.27■■□□□ 1.32
PABPN1-202ENST00000397276 BMP10O95393 424 aa23.27■■□□□ 1.32
PABPN1-202ENST00000397276 MAPK8P45983 427 aa23.27■■□□□ 1.32
PABPN1-202ENST00000397276 DLEU7Q6UYE1 221 aa23.27■■□□□ 1.32
PABPN1-202ENST00000397276 DPY19L3Q6ZPD9 716 aa23.27■■□□□ 1.32
PABPN1-202ENST00000397276 VOPP1Q96AW1 172 aa23.27■■□□□ 1.32
PABPN1-202ENST00000397276 ULK4Q96C45 1275 aa23.27■■□□□ 1.32
PABPN1-202ENST00000397276 SUV39H2Q9H5I1 410 aa23.27■■□□□ 1.32
PABPN1-202ENST00000397276 DOCK6Q96HP0 2047 aa23.27■■□□□ 1.32
PABPN1-202ENST00000397276 A0A1W2PPW3 197 aa23.27■■□□□ 1.32
PABPN1-202ENST00000397276 PMS2P3Q13401 168 aa23.27■■□□□ 1.32
PABPN1-202ENST00000397276 CPSF6Q16630 551 aaKnown RBP eCLIP23.27■■□□□ 1.32
PABPN1-202ENST00000397276 GPR107Q5VW38 600 aa23.27■■□□□ 1.32
PABPN1-202ENST00000397276 DNAJC14Q6Y2X3 702 aaPredicted RBP23.27■■□□□ 1.32
PABPN1-202ENST00000397276 MACC1Q6ZN28 852 aa23.27■■□□□ 1.32
PABPN1-202ENST00000397276 FAM8A1Q9UBU6 413 aa23.27■■□□□ 1.32
PABPN1-202ENST00000397276 TANC1Q9C0D5 1861 aa23.27■■□□□ 1.32
PABPN1-202ENST00000397276 MYOFQ9NZM1 2061 aa23.27■■□□□ 1.32
PABPN1-202ENST00000397276 COQ9O75208 318 aa23.26■■□□□ 1.31
PABPN1-202ENST00000397276 ULK1O75385 1050 aa23.26■■□□□ 1.31
PABPN1-202ENST00000397276 HRH2P25021 359 aa23.26■■□□□ 1.31
PABPN1-202ENST00000397276 CCR2P41597 374 aa23.26■■□□□ 1.31
PABPN1-202ENST00000397276 NUP107P57740 925 aa23.26■■□□□ 1.31
PABPN1-202ENST00000397276 WDR5P61964 334 aaKnown RBP23.26■■□□□ 1.31
PABPN1-202ENST00000397276 TUBA4AP68366 448 aa23.26■■□□□ 1.31
PABPN1-202ENST00000397276 SLC7A9P82251 487 aa23.26■■□□□ 1.31
PABPN1-202ENST00000397276 IMPG1Q17R60 797 aa23.26■■□□□ 1.31
PABPN1-202ENST00000397276 FGD3Q5JSP0 725 aa23.26■■□□□ 1.31
PABPN1-202ENST00000397276 ASTLQ6HA08 431 aaPredicted RBP23.26■■□□□ 1.31
PABPN1-202ENST00000397276 GLYATQ6IB77 296 aa23.26■■□□□ 1.31
PABPN1-202ENST00000397276 TPRG1Q6ZUI0 275 aa23.26■■□□□ 1.31
PABPN1-202ENST00000397276 OFCC1Q8IZS5 231 aa23.26■■□□□ 1.31
PABPN1-202ENST00000397276 BIRC7Q96CA5 298 aa23.26■■□□□ 1.31
PABPN1-202ENST00000397276 SCRN2Q96FV2 425 aa23.26■■□□□ 1.31
PABPN1-202ENST00000397276 FBXL20Q96IG2 436 aa23.26■■□□□ 1.31
PABPN1-202ENST00000397276 RNF145Q96MT1 663 aa23.26■■□□□ 1.31
PABPN1-202ENST00000397276 LRRC3Q9BY71 257 aa23.26■■□□□ 1.31
PABPN1-202ENST00000397276 SOX17Q9H6I2 414 aaPredicted RBP23.26■■□□□ 1.31
PABPN1-202ENST00000397276 TCRBV5S2A0A599 114 aa23.26■■□□□ 1.31
PABPN1-202ENST00000397276 ANKRD28O15084 1053 aa23.26■■□□□ 1.31
PABPN1-202ENST00000397276 SEC22BO75396 215 aa23.26■■□□□ 1.31
PABPN1-202ENST00000397276 CCR7P32248 378 aa23.26■■□□□ 1.31
PABPN1-202ENST00000397276 MRPL19P49406 292 aaKnown RBP23.26■■□□□ 1.31
PABPN1-202ENST00000397276 B4GALNT1Q00973 533 aa23.26■■□□□ 1.31
PABPN1-202ENST00000397276 SULT1C3Q6IMI6 304 aa23.26■■□□□ 1.31
PABPN1-202ENST00000397276 CPXM2Q8N436 756 aa23.26■■□□□ 1.31
PABPN1-202ENST00000397276 ZBTB8BQ8NAP8 495 aaPredicted RBP23.26■■□□□ 1.31
PABPN1-202ENST00000397276 CHST14Q8NCH0 376 aa23.26■■□□□ 1.31
PABPN1-202ENST00000397276 ARL15Q9NXU5 204 aa23.26■■□□□ 1.31
PABPN1-202ENST00000397276 ANAPC2Q9UJX6 822 aa23.26■■□□□ 1.31
PABPN1-202ENST00000397276 CCL27Q9Y4X3 112 aa23.26■■□□□ 1.31
PABPN1-202ENST00000397276 ZFC3H1O60293 1989 aaKnown RBP23.26■■□□□ 1.31
PABPN1-202ENST00000397276 NEDD8-MDP1E9PL57 170 aa23.25■■□□□ 1.31
PABPN1-202ENST00000397276 K7EPI3 171 aa23.25■■□□□ 1.31
PABPN1-202ENST00000397276 ENO2P09104 434 aaPredicted RBP23.25■■□□□ 1.31
PABPN1-202ENST00000397276 EPB42P16452 691 aa23.25■■□□□ 1.31
PABPN1-202ENST00000397276 NSG1P42857 185 aa23.25■■□□□ 1.31
PABPN1-202ENST00000397276 RPIAP49247 311 aa23.25■■□□□ 1.31
PABPN1-202ENST00000397276 CRY1Q16526 586 aa23.25■■□□□ 1.31
PABPN1-202ENST00000397276 GPR33Q49SQ1 333 aa23.25■■□□□ 1.31
PABPN1-202ENST00000397276 Q6ZVU0 165 aa23.25■■□□□ 1.31
PABPN1-202ENST00000397276 PTRH1Q86Y79 214 aaKnown RBP23.25■■□□□ 1.31
PABPN1-202ENST00000397276 KRTCAP2Q8N6L1 136 aa23.25■■□□□ 1.31
PABPN1-202ENST00000397276 HM13Q8TCT9 377 aa23.25■■□□□ 1.31
PABPN1-202ENST00000397276 GFM2Q969S9 779 aaKnown RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms