RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 WDR55Q9H6Y2 383 aaPredicted RBP14.61□□□□□ -0.07
CAPN3-207ENST00000397200 CYP4F12Q9HCS2 524 aa14.61□□□□□ -0.07
CAPN3-207ENST00000397200 NOP53Q9NZM5 478 aaKnown RBP14.61□□□□□ -0.07
CAPN3-207ENST00000397200 GNPTGQ9UJJ9 305 aa14.61□□□□□ -0.07
CAPN3-207ENST00000397200 TMEM98Q9Y2Y6 226 aa14.61□□□□□ -0.07
CAPN3-207ENST00000397200 L3MBTL1Q9Y468 752 aa14.61□□□□□ -0.07
CAPN3-207ENST00000397200 PCDHB1Q9Y5F3 818 aa14.61□□□□□ -0.07
CAPN3-207ENST00000397200 SLCO1B1Q9Y6L6 691 aa14.61□□□□□ -0.07
CAPN3-207ENST00000397200 VEGFDO43915 354 aa14.6□□□□□ -0.07
CAPN3-207ENST00000397200 KERAO60938 352 aa14.6□□□□□ -0.07
CAPN3-207ENST00000397200 LILRB5O75023 590 aa14.6□□□□□ -0.07
CAPN3-207ENST00000397200 SMIM24O75264 130 aa14.6□□□□□ -0.07
CAPN3-207ENST00000397200 ENTPD5O75356 428 aa14.6□□□□□ -0.07
CAPN3-207ENST00000397200 CDK14O94921 469 aa14.6□□□□□ -0.07
CAPN3-207ENST00000397200 ESR1P03372 595 aa14.6□□□□□ -0.07
CAPN3-207ENST00000397200 THEGLP0DJG4 465 aa14.6□□□□□ -0.07
CAPN3-207ENST00000397200 COX4I1P13073 169 aa14.6□□□□□ -0.07
CAPN3-207ENST00000397200 PKMP14618 531 aaKnown RBP14.6□□□□□ -0.07
CAPN3-207ENST00000397200 GNAZP19086 355 aa14.6□□□□□ -0.07
CAPN3-207ENST00000397200 NCF2P19878 526 aaPredicted RBP14.6□□□□□ -0.07
CAPN3-207ENST00000397200 KELP23276 732 aa14.6□□□□□ -0.07
CAPN3-207ENST00000397200 ITPKAP23677 461 aa14.6□□□□□ -0.07
CAPN3-207ENST00000397200 HTR1BP28222 390 aa14.6□□□□□ -0.07
CAPN3-207ENST00000397200 CD38P28907 300 aa14.6□□□□□ -0.07
CAPN3-207ENST00000397200 EPHA3P29320 983 aa14.6□□□□□ -0.07
CAPN3-207ENST00000397200 HERVK_113P63132 956 aa14.6□□□□□ -0.07
CAPN3-207ENST00000397200 NFATC4Q14934 902 aa14.6□□□□□ -0.07
CAPN3-207ENST00000397200 ACSBG2Q5FVE4 666 aa14.6□□□□□ -0.07
CAPN3-207ENST00000397200 CTSL3PQ5NE16 218 aa14.6□□□□□ -0.07
CAPN3-207ENST00000397200 PRR23BQ6ZRT6 265 aa14.6□□□□□ -0.07
CAPN3-207ENST00000397200 DET1Q7L5Y6 550 aa14.6□□□□□ -0.07
CAPN3-207ENST00000397200 ADGRG6Q86SQ4 1221 aa14.6□□□□□ -0.07
CAPN3-207ENST00000397200 CUZD1Q86UP6 607 aa14.6□□□□□ -0.07
CAPN3-207ENST00000397200 ULK2Q8IYT8 1036 aa14.6□□□□□ -0.07
CAPN3-207ENST00000397200 CLDN19Q8N6F1 224 aa14.6□□□□□ -0.07
CAPN3-207ENST00000397200 OR13H1Q8NG92 308 aa14.6□□□□□ -0.07
CAPN3-207ENST00000397200 ACTRT2Q8TDY3 377 aa14.6□□□□□ -0.07
CAPN3-207ENST00000397200 KLHDC7BQ96G42 594 aa14.6□□□□□ -0.07
CAPN3-207ENST00000397200 RTKNQ9BST9 563 aa14.6□□□□□ -0.07
CAPN3-207ENST00000397200 ERVK-6Q9BXR3 956 aa14.6□□□□□ -0.07
CAPN3-207ENST00000397200 P2RY12Q9H244 342 aa14.6□□□□□ -0.07
CAPN3-207ENST00000397200 DCLRE1BQ9H816 532 aa14.6□□□□□ -0.07
CAPN3-207ENST00000397200 MEAF6Q9HAF1 191 aa14.6□□□□□ -0.07
CAPN3-207ENST00000397200 TM9SF3Q9HD45 589 aa14.6□□□□□ -0.07
CAPN3-207ENST00000397200 ATXN10Q9UBB4 475 aa14.6□□□□□ -0.07
CAPN3-207ENST00000397200 NKX1-2Q9UD57 310 aaPredicted RBP14.6□□□□□ -0.07
CAPN3-207ENST00000397200 PIKFYVEQ9Y2I7 2098 aa14.6□□□□□ -0.07
CAPN3-207ENST00000397200 FANCMQ8IYD8 2048 aa14.6□□□□□ -0.07
CAPN3-207ENST00000397200 TMEM233B4DJY2 109 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 QSOX1O00391 747 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 AP2A2O94973 939 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 OR56A5P0C7T3 313 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 PIK3R1P27986 724 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 PTK2BQ14289 1009 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 KPNB1Q14974 876 aaKnown RBP14.59□□□□□ -0.07
CAPN3-207ENST00000397200 TRMT5Q32P41 509 aaKnown RBP14.59□□□□□ -0.07
CAPN3-207ENST00000397200 UNC50Q53HI1 259 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 PTRHD1Q6GMV3 140 aaKnown RBP14.59□□□□□ -0.07
CAPN3-207ENST00000397200 PGM2L1Q6PCE3 622 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 ZC3H14Q6PJT7 736 aaKnown RBP14.59□□□□□ -0.07
CAPN3-207ENST00000397200 PAQR3Q6TCH7 311 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 CHSY3Q70JA7 882 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 SCUBE1Q8IWY4 988 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 AFAP1L2Q8N4X5 818 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 NKAPQ8N5F7 415 aaKnown RBP14.59□□□□□ -0.07
CAPN3-207ENST00000397200 POU5F2Q8N7G0 328 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 RASGEF1AQ8N9B8 481 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 MFSD2AQ8NA29 543 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 C1orf216Q8TAB5 229 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 NAT14Q8WUY8 206 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 WDR60Q8WVS4 1066 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 KCNJ9Q92806 393 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 WDR92Q96MX6 357 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 TNFRSF12AQ9NP84 129 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 MRGBPQ9NV56 204 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 PRSS21Q9Y6M0 314 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 GON4LQ3T8J9 2241 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 A0A088AWK7 358 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 GOLGA8QA0A0J9YX86 632 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 GOLGA8OA6NCC3 632 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 TMEM202A6NGA9 273 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 OR2AG2A6NM03 316 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 GPR89AB7ZAQ6 455 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 GOLGA8NF8WBI6 632 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 UBFD1O14562 309 aaKnown RBP14.59□□□□□ -0.07
CAPN3-207ENST00000397200 BCAT2O15382 392 aaPredicted RBP14.59□□□□□ -0.07
CAPN3-207ENST00000397200 KLK8O60259 260 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 CCNT2O60583 730 aaKnown RBP14.59□□□□□ -0.07
CAPN3-207ENST00000397200 VPS26AO75436 327 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 TSPAN12O95859 305 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 GPR89BP0CG08 455 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 EZRP15311 586 aaKnown RBP14.59□□□□□ -0.07
CAPN3-207ENST00000397200 ZNF8P17098 575 aaPredicted RBP14.59□□□□□ -0.07
CAPN3-207ENST00000397200 ITGAXP20702 1163 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 PDCD2Q16342 344 aaPredicted RBP14.59□□□□□ -0.07
CAPN3-207ENST00000397200 TMEM220Q6QAJ8 160 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 ENPP7Q6UWV6 458 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 MACC1Q6ZN28 852 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 IQCHQ86VS3 1027 aa14.59□□□□□ -0.07
CAPN3-207ENST00000397200 DCP2Q8IU60 420 aaKnown RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms