RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 TOP3AQ13472 1001 aaPredicted RBP9.66□□□□□ -0.86
TRIM39-203ENST00000396547 ZFAND4Q86XD8 727 aa9.66□□□□□ -0.86
TRIM39-203ENST00000396547 MMAAQ8IVH4 418 aaKnown RBP9.66□□□□□ -0.86
TRIM39-203ENST00000396547 OR8H2Q8N162 312 aa9.66□□□□□ -0.86
TRIM39-203ENST00000396547 ATG16L2Q8NAA4 619 aa9.66□□□□□ -0.86
TRIM39-203ENST00000396547 OR56A4Q8NGH8 313 aa9.66□□□□□ -0.86
TRIM39-203ENST00000396547 OR4L1Q8NH43 312 aa9.66□□□□□ -0.86
TRIM39-203ENST00000396547 EFHD2Q96C19 240 aaPredicted RBP9.66□□□□□ -0.86
TRIM39-203ENST00000396547 VMP1Q96GC9 406 aa9.66□□□□□ -0.86
TRIM39-203ENST00000396547 MFSD1Q9H3U5 465 aa9.66□□□□□ -0.86
TRIM39-203ENST00000396547 PAK6Q9NQU5 681 aaPredicted RBP9.66□□□□□ -0.86
TRIM39-203ENST00000396547 SMPD4Q9NXE4 827 aa9.66□□□□□ -0.86
TRIM39-203ENST00000396547 KIF17Q9P2E2 1029 aa9.66□□□□□ -0.86
TRIM39-203ENST00000396547 UGT2A1Q9Y4X1 527 aa9.66□□□□□ -0.86
TRIM39-203ENST00000396547 IPPQ9Y573 584 aa9.66□□□□□ -0.86
TRIM39-203ENST00000396547 MKI67P46013 3256 aaKnown RBP9.66□□□□□ -0.86
TRIM39-203ENST00000396547 A0A1W2PQ67 120 aa9.66□□□□□ -0.86
TRIM39-203ENST00000396547 PDZK1P1A8MUH7 402 aa9.66□□□□□ -0.86
TRIM39-203ENST00000396547 E9PAM4 449 aa9.66□□□□□ -0.86
TRIM39-203ENST00000396547 TFECO14948 347 aaPredicted RBP9.66□□□□□ -0.86
TRIM39-203ENST00000396547 RGS10O43665 173 aa9.66□□□□□ -0.86
TRIM39-203ENST00000396547 OR1I1O60431 355 aa9.66□□□□□ -0.86
TRIM39-203ENST00000396547 VPS4BO75351 444 aa9.66□□□□□ -0.86
TRIM39-203ENST00000396547 UPK1BO75841 260 aa9.66□□□□□ -0.86
TRIM39-203ENST00000396547 WARSP23381 471 aaKnown RBP9.66□□□□□ -0.86
TRIM39-203ENST00000396547 RENBPP51606 427 aa9.66□□□□□ -0.86
TRIM39-203ENST00000396547 SPANXN4Q5MJ08 99 aa9.66□□□□□ -0.86
TRIM39-203ENST00000396547 ZNF691Q5VV52 312 aa9.66□□□□□ -0.86
TRIM39-203ENST00000396547 SMYD5Q6GMV2 418 aa9.66□□□□□ -0.86
TRIM39-203ENST00000396547 LETMD1Q6P1Q0 360 aa9.66□□□□□ -0.86
TRIM39-203ENST00000396547 Q6ZPB1 254 aaPredicted RBP9.66□□□□□ -0.86
TRIM39-203ENST00000396547 CYP4Z1Q86W10 505 aa9.66□□□□□ -0.86
TRIM39-203ENST00000396547 NETO1Q8TDF5 533 aa9.66□□□□□ -0.86
TRIM39-203ENST00000396547 EEF1AKMT1Q8WVE0 214 aa9.66□□□□□ -0.86
TRIM39-203ENST00000396547 DPF3Q92784 378 aa9.66□□□□□ -0.86
TRIM39-203ENST00000396547 FAM124BQ9H5Z6 455 aaPredicted RBP9.66□□□□□ -0.86
TRIM39-203ENST00000396547 VNN3Q9NY84 501 aa9.66□□□□□ -0.86
TRIM39-203ENST00000396547 TAS2R13Q9NYV9 303 aa9.66□□□□□ -0.86
TRIM39-203ENST00000396547 GPR39O43194 453 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 LDB2O43679 373 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 AIREO43918 545 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 CACNG3O60359 315 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 FKBP9O95302 570 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 S100A5P33763 92 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 GDF5P43026 501 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 HNRNPFP52597 415 aaKnown RBP9.65□□□□□ -0.86
TRIM39-203ENST00000396547 NUDT6P53370 316 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 MAP2K5Q13163 448 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 PON2Q15165 354 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 VARS2Q5ST30 1063 aaKnown RBP9.65□□□□□ -0.86
TRIM39-203ENST00000396547 TIGD7Q6NT04 549 aaPredicted RBP9.65□□□□□ -0.86
TRIM39-203ENST00000396547 CES5AQ6NT32 575 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 FKBP9P1Q75LS8 142 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 CYP2U1Q7Z449 544 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 GPR142Q7Z601 462 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 GPSM1Q86YR5 675 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 EFHBQ8N7U6 833 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 MINDY2Q8NBR6 621 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 PIK3C3Q8NEB9 887 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 FAM120BQ96EK7 910 aaKnown RBP9.65□□□□□ -0.86
TRIM39-203ENST00000396547 DHRS1Q96LJ7 313 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 ZBTB18Q99592 522 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 KCNS3Q9BQ31 491 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 SLIRPQ9GZT3 109 aaKnown RBP9.65□□□□□ -0.86
TRIM39-203ENST00000396547 KAT8Q9H7Z6 458 aaKnown RBP9.65□□□□□ -0.86
TRIM39-203ENST00000396547 CDH9Q9ULB4 789 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 PKP3Q9Y446 797 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 A0A096LPI6 279 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 AP3D1O14617 1153 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 TLR5O60602 858 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 MLYCDO95822 493 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 C21orf33P30042 268 aaPredicted RBP9.65□□□□□ -0.86
TRIM39-203ENST00000396547 CD6P30203 668 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 GRIK1P39086 918 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 CASP3P42574 277 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 PWP1Q13610 501 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 CBX2Q14781 532 aaPredicted RBP9.65□□□□□ -0.86
TRIM39-203ENST00000396547 ZNF404Q494X3 552 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 ALFQ53S48 1182 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 ALKAL1Q6UXT8 129 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 CEP68Q76N32 757 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 MIB1Q86YT6 1006 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 TOP6BLQ8N6T0 577 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 LINC01465Q8N7H1 131 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 OR4K2Q8NGD2 314 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 CDC26Q8NHZ8 85 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 GPR152Q8TDT2 470 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 FUBP1Q96AE4 644 aaKnown RBP9.65□□□□□ -0.86
TRIM39-203ENST00000396547 LINGO1Q96FE5 620 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 CDK5RAP1Q96SZ6 601 aaKnown RBP9.65□□□□□ -0.86
TRIM39-203ENST00000396547 CHCHD6Q9BRQ6 235 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 BEX2Q9BXY8 128 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 MRM3Q9HC36 420 aaKnown RBP9.65□□□□□ -0.86
TRIM39-203ENST00000396547 FARSBQ9NSD9 589 aaKnown RBP9.65□□□□□ -0.86
TRIM39-203ENST00000396547 ADPRHL2Q9NX46 363 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 ERVK13-1Q9NX77 482 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 USE1Q9NZ43 259 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 EIF3LQ9Y262 564 aaKnown RBP9.65□□□□□ -0.86
TRIM39-203ENST00000396547 DOCK3Q8IZD9 2030 aa9.65□□□□□ -0.86
TRIM39-203ENST00000396547 MOXD2PA6NHM9 499 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms