RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 DENND1AQ8TEH3 1009 aa16.95■□□□□ 0.3
EXOSC3-202ENST00000396521 RBM41Q96IZ5 413 aaKnown RBP16.95■□□□□ 0.3
EXOSC3-202ENST00000396521 ATP13A2Q9NQ11 1180 aa16.95■□□□□ 0.3
EXOSC3-202ENST00000396521 FAM8A1Q9UBU6 413 aa16.95■□□□□ 0.3
EXOSC3-202ENST00000396521 NDOR1Q9UHB4 597 aa16.95■□□□□ 0.3
EXOSC3-202ENST00000396521 FEZ2Q9UHY8 353 aaPredicted RBP16.95■□□□□ 0.3
EXOSC3-202ENST00000396521 INTUQ9ULD6 942 aa16.95■□□□□ 0.3
EXOSC3-202ENST00000396521 ARL5AQ9Y689 179 aa16.95■□□□□ 0.3
EXOSC3-202ENST00000396521 CRYBG3Q68DQ2 2970 aa16.95■□□□□ 0.3
EXOSC3-202ENST00000396521 LRBAP50851 2863 aa16.94■□□□□ 0.3
EXOSC3-202ENST00000396521 BTN3A3O00478 584 aa16.94■□□□□ 0.3
EXOSC3-202ENST00000396521 BTN3A1O00481 513 aa16.94■□□□□ 0.3
EXOSC3-202ENST00000396521 KDM1AO60341 852 aa16.94■□□□□ 0.3
EXOSC3-202ENST00000396521 ZNF189O75820 626 aaPredicted RBP16.94■□□□□ 0.3
EXOSC3-202ENST00000396521 OR2B3O76000 313 aa16.94■□□□□ 0.3
EXOSC3-202ENST00000396521 ZRANB2O95218 330 aaKnown RBP eCLIP16.94■□□□□ 0.31e-7■□□□□ 10.3
EXOSC3-202ENST00000396521 PECAM1P16284 738 aaPredicted RBP16.94■□□□□ 0.3
EXOSC3-202ENST00000396521 LMAN1P49257 510 aa16.94■□□□□ 0.3
EXOSC3-202ENST00000396521 XIAPP98170 497 aa16.94■□□□□ 0.3
EXOSC3-202ENST00000396521 CRB2Q5IJ48 1285 aa16.94■□□□□ 0.3
EXOSC3-202ENST00000396521 FAM182AQ5T1J6 154 aa16.94■□□□□ 0.3
EXOSC3-202ENST00000396521 MLIPQ5VWP3 458 aa16.94■□□□□ 0.3
EXOSC3-202ENST00000396521 TLDC1Q6P9B6 456 aa16.94■□□□□ 0.3
EXOSC3-202ENST00000396521 SPESP1Q6UW49 350 aa16.94■□□□□ 0.3
EXOSC3-202ENST00000396521 SPOCD1Q6ZMY3 1216 aa16.94■□□□□ 0.3
EXOSC3-202ENST00000396521 Q6ZS92 163 aa16.94■□□□□ 0.3
EXOSC3-202ENST00000396521 CDHR3Q6ZTQ4 885 aa16.94■□□□□ 0.3
EXOSC3-202ENST00000396521 SNX20Q7Z614 316 aa16.94■□□□□ 0.3
EXOSC3-202ENST00000396521 DAAM2Q86T65 1068 aa16.94■□□□□ 0.3
EXOSC3-202ENST00000396521 LUZP1Q86V48 1076 aa16.94■□□□□ 0.3
EXOSC3-202ENST00000396521 ZC3H18Q86VM9 953 aaKnown RBP16.94■□□□□ 0.3
EXOSC3-202ENST00000396521 RCOR2Q8IZ40 523 aa16.94■□□□□ 0.3
EXOSC3-202ENST00000396521 OR52E1Q8NGJ3 308 aa16.94■□□□□ 0.3
EXOSC3-202ENST00000396521 UBE2Q2Q8WVN8 375 aa16.94■□□□□ 0.3
EXOSC3-202ENST00000396521 CCDC42Q96M95 316 aa16.94■□□□□ 0.3
EXOSC3-202ENST00000396521 QKIQ96PU8 341 aaKnown RBP eCLIP16.94■□□□□ 0.3
EXOSC3-202ENST00000396521 GBA3Q9H227 469 aa16.94■□□□□ 0.3
EXOSC3-202ENST00000396521 OR52A5Q9H2C5 316 aa16.94■□□□□ 0.3
EXOSC3-202ENST00000396521 ZNF552Q9H707 407 aaPredicted RBP16.94■□□□□ 0.3
EXOSC3-202ENST00000396521 COG4Q9H9E3 785 aa16.94■□□□□ 0.3
EXOSC3-202ENST00000396521 P4HTMQ9NXG6 502 aa16.94■□□□□ 0.3
EXOSC3-202ENST00000396521 IFT80Q9P2H3 777 aaPredicted RBP16.94■□□□□ 0.3
EXOSC3-202ENST00000396521 PTRH2Q9Y3E5 179 aaKnown RBP16.94■□□□□ 0.3
EXOSC3-202ENST00000396521 LDB2O43679 373 aa16.93■□□□□ 0.3
EXOSC3-202ENST00000396521 AGTP01019 485 aa16.93■□□□□ 0.3
EXOSC3-202ENST00000396521 TPM1P09493 284 aa16.93■□□□□ 0.3
EXOSC3-202ENST00000396521 SHMT2P34897 504 aa16.93■□□□□ 0.3
EXOSC3-202ENST00000396521 RAPSNQ13702 412 aa16.93■□□□□ 0.3
EXOSC3-202ENST00000396521 BOP1Q14137 746 aaKnown RBP16.93■□□□□ 0.3
EXOSC3-202ENST00000396521 PRPSAP1Q14558 356 aa16.93■□□□□ 0.3
EXOSC3-202ENST00000396521 CYP2A13Q16696 494 aa16.93■□□□□ 0.3
EXOSC3-202ENST00000396521 FAM69BQ5VUD6 431 aa16.93■□□□□ 0.3
EXOSC3-202ENST00000396521 CAVIN1Q6NZI2 390 aaKnown RBP16.93■□□□□ 0.3
EXOSC3-202ENST00000396521 ADGRF3Q8IZF5 1079 aa16.93■□□□□ 0.3
EXOSC3-202ENST00000396521 ST6GALNAC3Q8NDV1 305 aa16.93■□□□□ 0.3
EXOSC3-202ENST00000396521 TFGQ92734 400 aaPredicted RBP16.93■□□□□ 0.3
EXOSC3-202ENST00000396521 VPS50Q96JG6 964 aa16.93■□□□□ 0.3
EXOSC3-202ENST00000396521 GBP5Q96PP8 586 aa16.93■□□□□ 0.3
EXOSC3-202ENST00000396521 TXLNGQ9NUQ3 528 aa16.93■□□□□ 0.3
EXOSC3-202ENST00000396521 ZDHHC3Q9NYG2 299 aa16.93■□□□□ 0.3
EXOSC3-202ENST00000396521 ACTR10Q9NZ32 417 aa16.93■□□□□ 0.3
EXOSC3-202ENST00000396521 IFNKQ9P0W0 207 aa16.93■□□□□ 0.3
EXOSC3-202ENST00000396521 POLG2Q9UHN1 485 aa16.93■□□□□ 0.3
EXOSC3-202ENST00000396521 FKBPLQ9UIM3 349 aa16.93■□□□□ 0.3
EXOSC3-202ENST00000396521 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.93■□□□□ 0.3
EXOSC3-202ENST00000396521 IGLV3-16A0A075B6K0 115 aa16.92■□□□□ 0.3
EXOSC3-202ENST00000396521 QSOX1O00391 747 aa16.92■□□□□ 0.3
EXOSC3-202ENST00000396521 STK10O94804 968 aaKnown RBP16.92■□□□□ 0.3
EXOSC3-202ENST00000396521 COMTP21964 271 aa16.92■□□□□ 0.3
EXOSC3-202ENST00000396521 COL8A1P27658 744 aa16.92■□□□□ 0.3
EXOSC3-202ENST00000396521 PLOD1Q02809 727 aaPredicted RBP16.92■□□□□ 0.3
EXOSC3-202ENST00000396521 AIMP2Q13155 320 aaKnown RBP16.92■□□□□ 0.3
EXOSC3-202ENST00000396521 PTPRCAPQ14761 206 aa16.92■□□□□ 0.3
EXOSC3-202ENST00000396521 KAZNQ674X7 775 aa16.92■□□□□ 0.3
EXOSC3-202ENST00000396521 LILRA3Q8N6C8 439 aaPredicted RBP16.92■□□□□ 0.3
EXOSC3-202ENST00000396521 C19orf47Q8N9M1 422 aaKnown RBP16.92■□□□□ 0.3
EXOSC3-202ENST00000396521 FICDQ9BVA6 458 aa16.92■□□□□ 0.3
EXOSC3-202ENST00000396521 RUBCNLQ9H714 662 aa16.92■□□□□ 0.3
EXOSC3-202ENST00000396521 OR6C2Q9NZP2 312 aa16.92■□□□□ 0.3
EXOSC3-202ENST00000396521 PCDHGA10Q9Y5H3 936 aa16.92■□□□□ 0.3
EXOSC3-202ENST00000396521 AGPSO00116 658 aa16.91■□□□□ 0.3
EXOSC3-202ENST00000396521 ZSCAN9O15535 394 aaPredicted RBP16.91■□□□□ 0.3
EXOSC3-202ENST00000396521 AP2A2O94973 939 aa16.91■□□□□ 0.3
EXOSC3-202ENST00000396521 PIM1P11309 404 aaPredicted RBP16.91■□□□□ 0.3
EXOSC3-202ENST00000396521 TNNT1P13805 278 aa16.91■□□□□ 0.3
EXOSC3-202ENST00000396521 ADRA1AP35348 466 aa16.91■□□□□ 0.3
EXOSC3-202ENST00000396521 HADHBP55084 474 aaKnown RBP16.91■□□□□ 0.3
EXOSC3-202ENST00000396521 NKAIN1Q4KMZ8 207 aa16.91■□□□□ 0.3
EXOSC3-202ENST00000396521 IRAK1BP1Q5VVH5 260 aa16.91■□□□□ 0.3
EXOSC3-202ENST00000396521 KATNAL2Q8IYT4 538 aa16.91■□□□□ 0.3
EXOSC3-202ENST00000396521 PPP4R1Q8TF05 950 aa16.91■□□□□ 0.3
EXOSC3-202ENST00000396521 DLG3Q92796 817 aa16.91■□□□□ 0.3
EXOSC3-202ENST00000396521 NDC1Q9BTX1 674 aa16.91■□□□□ 0.3
EXOSC3-202ENST00000396521 ARNT2Q9HBZ2 717 aa16.91■□□□□ 0.3
EXOSC3-202ENST00000396521 SPTBP11277 2137 aa16.91■□□□□ 0.3
EXOSC3-202ENST00000396521 hCG_1818297A0A087WSY0 165 aa16.9■□□□□ 0.3
EXOSC3-202ENST00000396521 H3BMH7 237 aa16.9■□□□□ 0.3
EXOSC3-202ENST00000396521 APOC4-APOC2K7ER74 178 aa16.9■□□□□ 0.3
EXOSC3-202ENST00000396521 LIN7AO14910 233 aaPredicted RBP16.9■□□□□ 0.3
EXOSC3-202ENST00000396521 DDX3YO15523 660 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms