RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 LRFN3Q9BTN0 628 aa14.8□□□□□ -0.04
SCAF11-204ENST00000395454 RDH14Q9HBH5 336 aa14.8□□□□□ -0.04
SCAF11-204ENST00000395454 MID1IP1Q9NPA3 183 aa14.8□□□□□ -0.04
SCAF11-204ENST00000395454 TNPO3Q9Y5L0 923 aaKnown RBP14.8□□□□□ -0.04
SCAF11-204ENST00000395454 A0A088AWK7 358 aa14.8□□□□□ -0.04
SCAF11-204ENST00000395454 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.8□□□□□ -0.04
SCAF11-204ENST00000395454 WNT9AO14904 365 aa14.8□□□□□ -0.04
SCAF11-204ENST00000395454 GALR2O43603 387 aaPredicted RBP14.8□□□□□ -0.04
SCAF11-204ENST00000395454 ENO3P13929 434 aaPredicted RBP14.8□□□□□ -0.04
SCAF11-204ENST00000395454 TMEM259Q4ZIN3 620 aa14.8□□□□□ -0.04
SCAF11-204ENST00000395454 CDKL4Q5MAI5 379 aa14.8□□□□□ -0.04
SCAF11-204ENST00000395454 CLEC6AQ6EIG7 209 aa14.8□□□□□ -0.04
SCAF11-204ENST00000395454 NET1Q7Z628 596 aaPredicted RBP14.8□□□□□ -0.04
SCAF11-204ENST00000395454 TECPR1Q7Z6L1 1165 aa14.8□□□□□ -0.04
SCAF11-204ENST00000395454 TRIM69Q86WT6 500 aa14.8□□□□□ -0.04
SCAF11-204ENST00000395454 PHYKPLQ8IUZ5 450 aa14.8□□□□□ -0.04
SCAF11-204ENST00000395454 TMEFF1Q8IYR6 380 aa14.8□□□□□ -0.04
SCAF11-204ENST00000395454 MYO1HQ8N1T3 1032 aa14.8□□□□□ -0.04
SCAF11-204ENST00000395454 TRAM1L1Q8N609 369 aa14.8□□□□□ -0.04
SCAF11-204ENST00000395454 UBTD2Q8WUN7 234 aa14.8□□□□□ -0.04
SCAF11-204ENST00000395454 BIRC7Q96CA5 298 aa14.8□□□□□ -0.04
SCAF11-204ENST00000395454 PPP1R36Q96LQ0 422 aa14.8□□□□□ -0.04
SCAF11-204ENST00000395454 COQ10AQ96MF6 247 aa14.8□□□□□ -0.04
SCAF11-204ENST00000395454 SLC17A9Q9BYT1 436 aa14.8□□□□□ -0.04
SCAF11-204ENST00000395454 RNPEPL1Q9HAU8 725 aa14.8□□□□□ -0.04
SCAF11-204ENST00000395454 SARS2Q9NP81 518 aaKnown RBP14.8□□□□□ -0.04
SCAF11-204ENST00000395454 KCTD5Q9NXV2 234 aa14.8□□□□□ -0.04
SCAF11-204ENST00000395454 CEP192Q8TEP8 1941 aa14.79□□□□□ -0.04
SCAF11-204ENST00000395454 SPAG17Q6Q759 2223 aa14.79□□□□□ -0.04
SCAF11-204ENST00000395454 THADAQ6YHU6 1953 aa14.79□□□□□ -0.04
SCAF11-204ENST00000395454 DLL1O00548 723 aa14.79□□□□□ -0.04
SCAF11-204ENST00000395454 SLC31A1O15431 190 aa14.79□□□□□ -0.04
SCAF11-204ENST00000395454 PRR35P0CG20 571 aa14.79□□□□□ -0.04
SCAF11-204ENST00000395454 ITGAXP20702 1163 aa14.79□□□□□ -0.04
SCAF11-204ENST00000395454 MRPL19P49406 292 aaKnown RBP14.79□□□□□ -0.04
SCAF11-204ENST00000395454 AGTR2P50052 363 aa14.79□□□□□ -0.04
SCAF11-204ENST00000395454 PKNOX1P55347 436 aa14.79□□□□□ -0.04
SCAF11-204ENST00000395454 FGL2Q14314 439 aa14.79□□□□□ -0.04
SCAF11-204ENST00000395454 SQLEQ14534 574 aa14.79□□□□□ -0.04
SCAF11-204ENST00000395454 ZNF284Q2VY69 593 aa14.79□□□□□ -0.04
SCAF11-204ENST00000395454 ACSBG2Q5FVE4 666 aa14.79□□□□□ -0.04
SCAF11-204ENST00000395454 KIAA0895LQ68EN5 471 aa14.79□□□□□ -0.04
SCAF11-204ENST00000395454 EFL1Q7Z2Z2 1120 aaKnown RBP14.79□□□□□ -0.04
SCAF11-204ENST00000395454 SCUBE1Q8IWY4 988 aa14.79□□□□□ -0.04
SCAF11-204ENST00000395454 DDHD1Q8NEL9 900 aa14.79□□□□□ -0.04
SCAF11-204ENST00000395454 HMGCLL1Q8TB92 370 aa14.79□□□□□ -0.04
SCAF11-204ENST00000395454 TRPC4APQ8TEL6 797 aa14.79□□□□□ -0.04
SCAF11-204ENST00000395454 TWIST2Q8WVJ9 160 aa14.79□□□□□ -0.04
SCAF11-204ENST00000395454 GAB3Q8WWW8 586 aa14.79□□□□□ -0.04
SCAF11-204ENST00000395454 SCAMP4Q969E2 229 aa14.79□□□□□ -0.04
SCAF11-204ENST00000395454 NUS1Q96E22 293 aa14.79□□□□□ -0.04
SCAF11-204ENST00000395454 DTD2Q96FN9 168 aa14.79□□□□□ -0.04
SCAF11-204ENST00000395454 CATSPER2Q96P56 530 aa14.79□□□□□ -0.04
SCAF11-204ENST00000395454 VPS35Q96QK1 796 aa14.79□□□□□ -0.04
SCAF11-204ENST00000395454 MYOCQ99972 504 aa14.79□□□□□ -0.04
SCAF11-204ENST00000395454 ZSCAN5AQ9BUG6 496 aa14.79□□□□□ -0.04
SCAF11-204ENST00000395454 FAM83DQ9H4H8 585 aa14.79□□□□□ -0.04
SCAF11-204ENST00000395454 ZSCAN32Q9NX65 697 aa14.79□□□□□ -0.04
SCAF11-204ENST00000395454 SLC7A8Q9UHI5 535 aa14.79□□□□□ -0.04
SCAF11-204ENST00000395454 ZNF225Q9UK10 706 aa14.79□□□□□ -0.04
SCAF11-204ENST00000395454 PTBP2Q9UKA9 531 aaKnown RBP14.79□□□□□ -0.04
SCAF11-204ENST00000395454 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.79□□□□□ -0.04
SCAF11-204ENST00000395454 MEI4A8MW99 385 aa14.78□□□□□ -0.04
SCAF11-204ENST00000395454 RAD51BO15315 384 aa14.78□□□□□ -0.04
SCAF11-204ENST00000395454 FFAR2O15552 330 aa14.78□□□□□ -0.04
SCAF11-204ENST00000395454 NUAK1O60285 661 aa14.78□□□□□ -0.04
SCAF11-204ENST00000395454 CCNT2O60583 730 aaKnown RBP14.78□□□□□ -0.04
SCAF11-204ENST00000395454 SNX2O60749 519 aa14.78□□□□□ -0.04
SCAF11-204ENST00000395454 AP2A2O94973 939 aa14.78□□□□□ -0.04
SCAF11-204ENST00000395454 LMNAP02545 664 aaKnown RBP14.78□□□□□ -0.04
SCAF11-204ENST00000395454 IGHV4-34P06331 123 aa14.78□□□□□ -0.04
SCAF11-204ENST00000395454 TSPAN8P19075 237 aa14.78□□□□□ -0.04
SCAF11-204ENST00000395454 ACADVLP49748 655 aa14.78□□□□□ -0.04
SCAF11-204ENST00000395454 FOXA1P55317 472 aa14.78□□□□□ -0.04
SCAF11-204ENST00000395454 TRMT5Q32P41 509 aaKnown RBP14.78□□□□□ -0.04
SCAF11-204ENST00000395454 XKR7Q5GH72 579 aa14.78□□□□□ -0.04
SCAF11-204ENST00000395454 NXNQ6DKJ4 435 aa14.78□□□□□ -0.04
SCAF11-204ENST00000395454 RASGRP3Q8IV61 690 aa14.78□□□□□ -0.04
SCAF11-204ENST00000395454 NRSN1Q8IZ57 195 aa14.78□□□□□ -0.04
SCAF11-204ENST00000395454 OR56A4Q8NGH8 313 aa14.78□□□□□ -0.04
SCAF11-204ENST00000395454 HSPA12BQ96MM6 686 aa14.78□□□□□ -0.04
SCAF11-204ENST00000395454 CCT7Q99832 543 aa14.78□□□□□ -0.04
SCAF11-204ENST00000395454 TUBB1Q9H4B7 451 aa14.78□□□□□ -0.04
SCAF11-204ENST00000395454 FZD3Q9NPG1 666 aa14.78□□□□□ -0.04
SCAF11-204ENST00000395454 CD274Q9NZQ7 290 aa14.78□□□□□ -0.04
SCAF11-204ENST00000395454 ASB1Q9Y576 335 aa14.78□□□□□ -0.04
SCAF11-204ENST00000395454 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.78□□□□□ -0.04
SCAF11-204ENST00000395454 A0A1B0GTL3 188 aa14.78□□□□□ -0.04
SCAF11-204ENST00000395454 UBDO15205 165 aa14.78□□□□□ -0.04
SCAF11-204ENST00000395454 LATO43561 262 aa14.78□□□□□ -0.04
SCAF11-204ENST00000395454 VPS4BO75351 444 aa14.78□□□□□ -0.04
SCAF11-204ENST00000395454 TRIM16O95361 564 aa14.78□□□□□ -0.04
SCAF11-204ENST00000395454 OR56A5P0C7T3 313 aa14.78□□□□□ -0.04
SCAF11-204ENST00000395454 AOAHP28039 575 aa14.78□□□□□ -0.04
SCAF11-204ENST00000395454 NUBP1P53384 320 aa14.78□□□□□ -0.04
SCAF11-204ENST00000395454 SLC25A3Q00325 362 aa14.78□□□□□ -0.04
SCAF11-204ENST00000395454 CREB5Q02930 508 aa14.78□□□□□ -0.04
SCAF11-204ENST00000395454 CYLC2Q14093 348 aaPredicted RBP14.78□□□□□ -0.04
SCAF11-204ENST00000395454 OGFOD2Q6N063 350 aa14.78□□□□□ -0.04
SCAF11-204ENST00000395454 CYP2U1Q7Z449 544 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms