RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 ASPDHA6ND91 283 aa18.53■□□□□ 0.56
HOXC6-202ENST00000394331 GLTPD2A6NH11 291 aa18.53■□□□□ 0.56
HOXC6-202ENST00000394331 DFNA5O60443 496 aa18.53■□□□□ 0.56
HOXC6-202ENST00000394331 LBPP18428 481 aa18.53■□□□□ 0.56
HOXC6-202ENST00000394331 CTU1Q7Z7A3 348 aaKnown RBP18.53■□□□□ 0.56
HOXC6-202ENST00000394331 TAC4Q86UU9 113 aa18.53■□□□□ 0.56
HOXC6-202ENST00000394331 CELF6Q96J87 481 aaKnown RBP18.53■□□□□ 0.56
HOXC6-202ENST00000394331 DMRTB1Q96MA1 342 aa18.53■□□□□ 0.56
HOXC6-202ENST00000394331 CCDC115Q96NT0 180 aa18.53■□□□□ 0.56
HOXC6-202ENST00000394331 ITPAQ9BY32 194 aa18.53■□□□□ 0.56
HOXC6-202ENST00000394331 MIR1-1HGQ9H1L0 117 aa18.53■□□□□ 0.56
HOXC6-202ENST00000394331 USP22Q9UPT9 525 aa18.53■□□□□ 0.56
HOXC6-202ENST00000394331 KRT87PA6NCN2 255 aa18.53■□□□□ 0.56
HOXC6-202ENST00000394331 MT-ND2P03891 347 aa18.53■□□□□ 0.56
HOXC6-202ENST00000394331 FSHRP23945 695 aa18.53■□□□□ 0.56
HOXC6-202ENST00000394331 CCNCP24863 283 aa18.53■□□□□ 0.56
HOXC6-202ENST00000394331 PGGT1BP53609 377 aa18.53■□□□□ 0.56
HOXC6-202ENST00000394331 KCNK10P57789 538 aa18.53■□□□□ 0.56
HOXC6-202ENST00000394331 NFKB2Q00653 900 aa18.53■□□□□ 0.56
HOXC6-202ENST00000394331 PCID2Q5JVF3 399 aa18.53■□□□□ 0.56
HOXC6-202ENST00000394331 CCDC190Q86UF4 302 aa18.53■□□□□ 0.56
HOXC6-202ENST00000394331 GALNT6Q8NCL4 622 aa18.53■□□□□ 0.56
HOXC6-202ENST00000394331 KBTBD8Q8NFY9 601 aa18.53■□□□□ 0.56
HOXC6-202ENST00000394331 CNIH3Q8TBE1 160 aa18.53■□□□□ 0.56
HOXC6-202ENST00000394331 SLC7A6Q92536 515 aa18.53■□□□□ 0.56
HOXC6-202ENST00000394331 MYLPFQ96A32 169 aa18.53■□□□□ 0.56
HOXC6-202ENST00000394331 SIGLEC11Q96RL6 698 aa18.53■□□□□ 0.56
HOXC6-202ENST00000394331 ZBTB20Q9HC78 741 aaPredicted RBP18.53■□□□□ 0.56
HOXC6-202ENST00000394331 ST3GAL5Q9UNP4 418 aa18.53■□□□□ 0.56
HOXC6-202ENST00000394331 H3BQ06 376 aaPredicted RBP18.52■□□□□ 0.56
HOXC6-202ENST00000394331 MAGP20916 626 aa18.52■□□□□ 0.56
HOXC6-202ENST00000394331 DGCR6Q14129 220 aa18.52■□□□□ 0.56
HOXC6-202ENST00000394331 KEAP1Q14145 624 aa18.52■□□□□ 0.56
HOXC6-202ENST00000394331 DENND5AQ6IQ26 1287 aa18.52■□□□□ 0.56
HOXC6-202ENST00000394331 PKN3Q6P5Z2 889 aa18.52■□□□□ 0.56
HOXC6-202ENST00000394331 KCTD20Q7Z5Y7 419 aa18.52■□□□□ 0.56
HOXC6-202ENST00000394331 IPCEF1Q8WWN9 437 aaPredicted RBP18.52■□□□□ 0.56
HOXC6-202ENST00000394331 CYP4F12Q9HCS2 524 aa18.52■□□□□ 0.56
HOXC6-202ENST00000394331 ABI2Q9NYB9 513 aaPredicted RBP18.52■□□□□ 0.56
HOXC6-202ENST00000394331 CPA4Q9UI42 421 aa18.52■□□□□ 0.56
HOXC6-202ENST00000394331 PNMA8BQ9ULN7 279 aaPredicted RBP18.52■□□□□ 0.56
HOXC6-202ENST00000394331 TBC1D24Q9ULP9 559 aa18.52■□□□□ 0.56
HOXC6-202ENST00000394331 TRPV2Q9Y5S1 764 aa18.52■□□□□ 0.56
HOXC6-202ENST00000394331 GPR45Q9Y5Y3 372 aa18.52■□□□□ 0.56
HOXC6-202ENST00000394331 ZNF236Q9UL36 1845 aa18.52■□□□□ 0.56
HOXC6-202ENST00000394331 DSCR3O14972 297 aa18.52■□□□□ 0.55
HOXC6-202ENST00000394331 ANXA9O76027 345 aa18.52■□□□□ 0.55
HOXC6-202ENST00000394331 SLITRK5O94991 958 aa18.52■□□□□ 0.55
HOXC6-202ENST00000394331 HOXB6P17509 224 aaKnown RBP18.52■□□□□ 0.55
HOXC6-202ENST00000394331 OR4D2P58180 307 aa18.52■□□□□ 0.55
HOXC6-202ENST00000394331 TAS2R39P59534 338 aa18.52■□□□□ 0.55
HOXC6-202ENST00000394331 PURAQ00577 322 aaKnown RBP18.52■□□□□ 0.55
HOXC6-202ENST00000394331 TRIP4Q15650 581 aaPredicted RBP18.52■□□□□ 0.55
HOXC6-202ENST00000394331 GPAT3Q53EU6 434 aa18.52■□□□□ 0.55
HOXC6-202ENST00000394331 SPANXN2Q5MJ10 180 aa18.52■□□□□ 0.55
HOXC6-202ENST00000394331 PIK3R6Q5UE93 754 aa18.52■□□□□ 0.55
HOXC6-202ENST00000394331 CAPN13Q6MZZ7 669 aaPredicted RBP18.52■□□□□ 0.55
HOXC6-202ENST00000394331 TXNDC11Q6PKC3 985 aa18.52■□□□□ 0.55
HOXC6-202ENST00000394331 DEPDC4Q8N2C3 294 aa18.52■□□□□ 0.55
HOXC6-202ENST00000394331 C3orf58Q8NDZ4 430 aa18.52■□□□□ 0.55
HOXC6-202ENST00000394331 OR5K1Q8NHB7 308 aa18.52■□□□□ 0.55
HOXC6-202ENST00000394331 PPP1R2P1Q96PQ5 205 aa18.52■□□□□ 0.55
HOXC6-202ENST00000394331 SDHCQ99643 169 aaPredicted RBP18.52■□□□□ 0.55
HOXC6-202ENST00000394331 MIOSQ9NXC5 875 aa18.52■□□□□ 0.55
HOXC6-202ENST00000394331 DNAJC15Q9Y5T4 150 aa18.52■□□□□ 0.55
HOXC6-202ENST00000394331 LYVE1Q9Y5Y7 322 aa18.52■□□□□ 0.55
HOXC6-202ENST00000394331 H3BMM5 538 aa18.51■□□□□ 0.55
HOXC6-202ENST00000394331 TRIM77I1YAP6 450 aa18.51■□□□□ 0.55
HOXC6-202ENST00000394331 AIREO43918 545 aa18.51■□□□□ 0.55
HOXC6-202ENST00000394331 NOS1APO75052 506 aaPredicted RBP18.51■□□□□ 0.55
HOXC6-202ENST00000394331 ODC1P11926 461 aa18.51■□□□□ 0.55
HOXC6-202ENST00000394331 GNPDA1P46926 289 aa18.51■□□□□ 0.55
HOXC6-202ENST00000394331 BCL7AQ4VC05 210 aa18.51■□□□□ 0.55
HOXC6-202ENST00000394331 ZNF678Q5SXM1 525 aa18.51■□□□□ 0.55
HOXC6-202ENST00000394331 SPATA19Q7Z5L4 167 aa18.51■□□□□ 0.55
HOXC6-202ENST00000394331 METTL23Q86XA0 190 aa18.51■□□□□ 0.55
HOXC6-202ENST00000394331 TCTE3Q8IZS6 198 aa18.51■□□□□ 0.55
HOXC6-202ENST00000394331 SPATA6LQ8N4H0 392 aa18.51■□□□□ 0.55
HOXC6-202ENST00000394331 OR2A14Q96R47 310 aa18.51■□□□□ 0.55
HOXC6-202ENST00000394331 FCRL5Q96RD9 977 aa18.51■□□□□ 0.55
HOXC6-202ENST00000394331 ACBD6Q9BR61 282 aa18.51■□□□□ 0.55
HOXC6-202ENST00000394331 GORASP2Q9H8Y8 452 aa18.51■□□□□ 0.55
HOXC6-202ENST00000394331 ORC6Q9Y5N6 252 aa18.51■□□□□ 0.55
HOXC6-202ENST00000394331 V9GYQ6 96 aa18.51■□□□□ 0.55
HOXC6-202ENST00000394331 SSX4O60224 188 aa18.51■□□□□ 0.55
HOXC6-202ENST00000394331 NOBOXO60393 691 aa18.51■□□□□ 0.55
HOXC6-202ENST00000394331 ARHGEF15O94989 841 aa18.51■□□□□ 0.55
HOXC6-202ENST00000394331 MT-CO1P00395 513 aa18.51■□□□□ 0.55
HOXC6-202ENST00000394331 SLC4A1P02730 911 aa18.51■□□□□ 0.55
HOXC6-202ENST00000394331 GGT1P19440 569 aa18.51■□□□□ 0.55
HOXC6-202ENST00000394331 SLC26A3P40879 764 aa18.51■□□□□ 0.55
HOXC6-202ENST00000394331 MLLT3P42568 568 aaPredicted RBP18.51■□□□□ 0.55
HOXC6-202ENST00000394331 IL5RAQ01344 420 aa18.51■□□□□ 0.55
HOXC6-202ENST00000394331 TIGD5Q53EQ6 642 aa18.51■□□□□ 0.55
HOXC6-202ENST00000394331 MICU2Q8IYU8 434 aa18.51■□□□□ 0.55
HOXC6-202ENST00000394331 GTF2H4Q92759 462 aa18.51■□□□□ 0.55
HOXC6-202ENST00000394331 TBL1YQ9BQ87 522 aa18.51■□□□□ 0.55
HOXC6-202ENST00000394331 TRIM8Q9BZR9 551 aa18.51■□□□□ 0.55
HOXC6-202ENST00000394331 ZNF556Q9HAH1 456 aa18.51■□□□□ 0.55
HOXC6-202ENST00000394331 POLR3BQ9NW08 1133 aaPredicted RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms