RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 ATP6AP2O75787 350 aa10.94□□□□□ -0.66
CUX1-204ENST00000393824 NDST3O95803 873 aa10.94□□□□□ -0.66
CUX1-204ENST00000393824 GLUD1P00367 558 aa10.94□□□□□ -0.66
CUX1-204ENST00000393824 RB1P06400 928 aa10.94□□□□□ -0.66
CUX1-204ENST00000393824 HMBSP08397 361 aa10.94□□□□□ -0.66
CUX1-204ENST00000393824 CCDC159P0C7I6 412 aa10.94□□□□□ -0.66
CUX1-204ENST00000393824 EEFSECP57772 596 aaKnown RBP10.94□□□□□ -0.66
CUX1-204ENST00000393824 EMX1Q04741 257 aaPredicted RBP10.94□□□□□ -0.66
CUX1-204ENST00000393824 VAC14Q08AM6 782 aa10.94□□□□□ -0.66
CUX1-204ENST00000393824 MEP1AQ16819 746 aa10.94□□□□□ -0.66
CUX1-204ENST00000393824 KIF19Q2TAC6 998 aa10.94□□□□□ -0.66
CUX1-204ENST00000393824 LAIR2Q6ISS4 152 aa10.94□□□□□ -0.66
CUX1-204ENST00000393824 BEND5Q7L4P6 421 aa10.94□□□□□ -0.66
CUX1-204ENST00000393824 PROSER1Q86XN7 944 aa10.94□□□□□ -0.66
CUX1-204ENST00000393824 TMC8Q8IU68 726 aa10.94□□□□□ -0.66
CUX1-204ENST00000393824 RAVER1Q8IY67 606 aaKnown RBP10.94□□□□□ -0.66
CUX1-204ENST00000393824 GPR65Q8IYL9 337 aa10.94□□□□□ -0.66
CUX1-204ENST00000393824 MIER2Q8N344 545 aa10.94□□□□□ -0.66
CUX1-204ENST00000393824 C12orf76Q8N812 135 aaPredicted RBP10.94□□□□□ -0.66
CUX1-204ENST00000393824 PJA1Q8NG27 643 aa10.94□□□□□ -0.66
CUX1-204ENST00000393824 PSMA8Q8TAA3 256 aa10.94□□□□□ -0.66
CUX1-204ENST00000393824 YIPF6Q96EC8 236 aa10.94□□□□□ -0.66
CUX1-204ENST00000393824 C19orf60Q96EN9 201 aa10.94□□□□□ -0.66
CUX1-204ENST00000393824 MYEOVQ96EZ4 313 aa10.94□□□□□ -0.66
CUX1-204ENST00000393824 RPL10LQ96L21 214 aaKnown RBP10.94□□□□□ -0.66
CUX1-204ENST00000393824 C3orf30Q96M34 536 aa10.94□□□□□ -0.66
CUX1-204ENST00000393824 DACH2Q96NX9 599 aa10.94□□□□□ -0.66
CUX1-204ENST00000393824 CDK5RAP1Q96SZ6 601 aaKnown RBP10.94□□□□□ -0.66
CUX1-204ENST00000393824 KCTD14Q9BQ13 255 aaPredicted RBP10.94□□□□□ -0.66
CUX1-204ENST00000393824 ALOXE3Q9BYJ1 711 aa10.94□□□□□ -0.66
CUX1-204ENST00000393824 TKTL2Q9H0I9 626 aa10.94□□□□□ -0.66
CUX1-204ENST00000393824 SMOC2Q9H3U7 446 aa10.94□□□□□ -0.66
CUX1-204ENST00000393824 TOR3AQ9H497 397 aa10.94□□□□□ -0.66
CUX1-204ENST00000393824 AKTIPQ9H8T0 292 aa10.94□□□□□ -0.66
CUX1-204ENST00000393824 SDR39U1Q9NRG7 319 aaPredicted RBP10.94□□□□□ -0.66
CUX1-204ENST00000393824 PAK1IP1Q9NWT1 392 aaPredicted RBP10.94□□□□□ -0.66
CUX1-204ENST00000393824 AAR2Q9Y312 384 aaKnown RBP10.94□□□□□ -0.66
CUX1-204ENST00000393824 ANGPTL3Q9Y5C1 460 aa10.94□□□□□ -0.66
CUX1-204ENST00000393824 UBFD1O14562 309 aaKnown RBP10.93□□□□□ -0.66
CUX1-204ENST00000393824 COCHO43405 550 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 TULP3O75386 442 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 RBP1P09455 135 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 TCF3P15923 654 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 PRKCAP17252 672 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 NFKB1P19838 968 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 HTR1EP28566 365 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 CXCR3P49682 368 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 KCNQ1P51787 676 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 TAS2R39P59534 338 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 NTHL1P78549 312 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 CYP4F8P98187 520 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 UBE3AQ05086 875 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 LIPEQ05469 1076 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 PIGFQ07326 219 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 CD47Q08722 323 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 EIF2B5Q13144 721 aaKnown RBP10.93□□□□□ -0.66
CUX1-204ENST00000393824 CARTPTQ16568 116 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 CTU2Q2VPK5 515 aaKnown RBP10.93□□□□□ -0.66
CUX1-204ENST00000393824 C10orf120Q5SQS8 335 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 TXNDC8Q6A555 127 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 BLOC1S3Q6QNY0 202 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 CCDC81Q6ZN84 652 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 CACTIN-AS1Q8N1I8 211 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 CLEC4FQ8N1N0 589 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 GLMNQ92990 594 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 ZNF566Q969W8 418 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 TMBIM1Q969X1 311 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 TCEAL4Q96EI5 215 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 PGAP3Q96FM1 320 aaPredicted RBP10.93□□□□□ -0.66
CUX1-204ENST00000393824 RNF145Q96MT1 663 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 SEPHS2Q99611 448 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 GSTO2Q9H4Y5 243 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 GKN1Q9NS71 199 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 IGSF5Q9NSI5 407 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 NPAP1Q9NZP6 1156 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 RWDD3Q9Y3V2 267 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 TYW5A2RUC4 315 aaKnown RBP10.93□□□□□ -0.66
CUX1-204ENST00000393824 SLC1A7O00341 560 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 MOCS2O96007 188 aaPredicted RBP10.93□□□□□ -0.66
CUX1-204ENST00000393824 MT-ND1P03886 318 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 NCK1P16333 377 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 CHRM3P20309 590 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 IMPDH1P20839 514 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 NRIP1P48552 1158 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 TPI1P60174 286 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 ISL1P61371 349 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 AGAP9Q5VTM2 703 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 PAGE2Q7Z2X7 111 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 IFNEQ86WN2 208 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 CLYBLQ8N0X4 340 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 KIAA1958Q8N8K9 716 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 ASCC1Q8N9N2 400 aaKnown RBP10.93□□□□□ -0.66
CUX1-204ENST00000393824 POC5Q8NA72 575 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 C2CD4AQ8NCU7 369 aaPredicted RBP10.93□□□□□ -0.66
CUX1-204ENST00000393824 RASSF5Q8WWW0 418 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 ASPSCR1Q9BZE9 553 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 CYP4F12Q9HCS2 524 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 TLR8Q9NR97 1041 aaKnown RBP10.93□□□□□ -0.66
CUX1-204ENST00000393824 AASDHPPTQ9NRN7 309 aa10.93□□□□□ -0.66
CUX1-204ENST00000393824 FKBP14Q9NWM8 211 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms