RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 PREPP48147 710 aa11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 GRSF1Q12849 480 aaKnown RBP eCLIP11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 SMAD4Q13485 552 aaKnown RBP11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 FASTKQ14296 549 aaKnown RBP11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 GRB7Q14451 532 aa11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 ZRSR2Q15696 482 aaKnown RBP11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 SNCBQ16143 134 aa11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 TRAPPC5Q8IUR0 188 aa11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 ZNF547Q8IVP9 402 aa11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 SCUBE1Q8IWY4 988 aa11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 DCBLD1Q8N8Z6 715 aa11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 FBXL8Q96CD0 374 aa11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 THTPAQ9BU02 230 aa11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 CD248Q9HCU0 757 aa11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 RIC8BQ9NVN3 520 aa11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 TRPS1Q9UHF7 1281 aa11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 F5P12259 2224 aa11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 ARHGEF33A8MVX0 844 aa11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 PLRG1O43660 514 aaKnown RBP11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 ZNF8P17098 575 aaPredicted RBP11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 MAP4P27816 1152 aaKnown RBP11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 PBLDP30039 288 aaPredicted RBP11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 ARL1P40616 181 aaPredicted RBP11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 MRPL19P49406 292 aaKnown RBP11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 STX1BP61266 288 aa11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 MRPS21P82921 87 aaKnown RBP11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 CDK3Q00526 305 aa11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 PLOD1Q02809 727 aaPredicted RBP11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 GSTA3Q16772 222 aa11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 ZXDCQ2QGD7 858 aaPredicted RBP11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 WSCD2Q2TBF2 565 aa11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 SPATA19Q7Z5L4 167 aa11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 HEATR4Q86WZ0 1026 aa11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 ULK2Q8IYT8 1036 aa11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 LILRA3Q8N6C8 439 aaPredicted RBP11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 FOPNLQ96NB1 174 aa11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 DENND2DQ9H6A0 471 aaPredicted RBP11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 FBXL12Q9NXK8 326 aa11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 FAM8A1Q9UBU6 413 aa11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 BAIAP2L1Q9UHR4 511 aa11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 SCML1Q9UN30 329 aa11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.18□□□□□ -0.62
SMARCAL1-203ENST00000392128 PRUNE2Q8WUY3 3088 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 CHUKO15111 745 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 MBTPS2O43462 519 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 WDR47O94967 919 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 CATP04040 527 aaKnown RBP11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 DNTTP04053 509 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 PCCBP05166 539 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 EPORP19235 508 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 COL9A1P20849 921 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 RPS21P63220 83 aaKnown RBP11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 ABRQ12979 859 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 TCHHL1Q5QJ38 904 aaPredicted RBP11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 KIAA1161Q6NSJ0 714 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 KYQ8NBH2 561 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 FBXO15Q8NCQ5 510 aaPredicted RBP11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 OR2T11Q8NH01 316 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 OR2L2Q8NH16 312 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 NDE1Q9NXR1 346 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 GIMAP2Q9UG22 337 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 LIMD1Q9UGP4 676 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 ZFR2Q9UPR6 939 aaKnown RBP11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 DOCK9Q9BZ29 2069 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 A0A088AWK7 358 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 H3BM21 787 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 IDO1P14902 403 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 GLULP15104 373 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 GPX3P22352 226 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 PDHA2P29803 388 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 HMOX2P30519 316 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 NUDT2P50583 147 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 STX5Q13190 355 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 PTCHD3Q3KNS1 767 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 GGTA1PQ4G0N0 100 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 AGKQ53H12 422 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 IL27RAQ6UWB1 636 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 XKR5Q6UX68 686 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 C16orf89Q6UX73 402 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 GK5Q6ZS86 529 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 C11orf96Q7Z7L8 435 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 KLHDC8AQ8IYD2 350 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 CFAP206Q8IYR0 622 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 DEFB107AQ8IZN7 70 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 RNF217Q8TC41 542 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 HM13Q8TCT9 377 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 ATL1Q8WXF7 558 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 RCN3Q96D15 328 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 CCDC138Q96M89 665 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 FAM161BQ96MY7 647 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 C1QTNF2Q9BXJ5 285 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 TEX101Q9BY14 249 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 SLC29A3Q9BZD2 475 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 DPEP2Q9H4A9 486 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 EFCAB1Q9HAE3 211 aa11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 SDR39U1Q9NRG7 319 aaPredicted RBP11.17□□□□□ -0.62
SMARCAL1-203ENST00000392128 MGAT4DA6NG13 374 aa11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 LOC730098B7Z3J9 87 aa11.16□□□□□ -0.62
SMARCAL1-203ENST00000392128 GPR89AB7ZAQ6 455 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms