RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 FNBP1Q96RU3 617 aa0.87□□□□□ -2.27
RNU6-239P-201ENST00000390990 LGMNQ99538 433 aa0.87□□□□□ -2.27
RNU6-239P-201ENST00000390990 MAP3K3Q99759 626 aa0.87□□□□□ -2.27
RNU6-239P-201ENST00000390990 PAGR1Q9BTK6 254 aa0.87□□□□□ -2.27
RNU6-239P-201ENST00000390990 SERINC1Q9NRX5 453 aa0.87□□□□□ -2.27
RNU6-239P-201ENST00000390990 MTMR10Q9NXD2 777 aa0.87□□□□□ -2.27
RNU6-239P-201ENST00000390990 GTSE1Q9NYZ3 720 aa0.87□□□□□ -2.27
RNU6-239P-201ENST00000390990 ABCD2Q9UBJ2 740 aa0.87□□□□□ -2.27
RNU6-239P-201ENST00000390990 ZNF69Q9UC07 566 aa0.87□□□□□ -2.27
RNU6-239P-201ENST00000390990 CNOT8Q9UFF9 292 aaKnown RBP0.87□□□□□ -2.27
RNU6-239P-201ENST00000390990 INTS6Q9UL03 887 aaKnown RBP0.87□□□□□ -2.27
RNU6-239P-201ENST00000390990 SPIN1Q9Y657 262 aaPredicted RBP0.87□□□□□ -2.27
RNU6-239P-201ENST00000390990 MAU2Q9Y6X3 613 aa0.87□□□□□ -2.27
RNU6-239P-201ENST00000390990 ARHGEF40Q8TER5 1519 aa0.87□□□□□ -2.27
RNU6-239P-201ENST00000390990 GON4LQ3T8J9 2241 aa0.87□□□□□ -2.27
RNU6-239P-201ENST00000390990 RALGAPA1Q6GYQ0 2036 aa0.86□□□□□ -2.27
RNU6-239P-201ENST00000390990 IGHV4-30-2A0A087WSY4 118 aa0.86□□□□□ -2.27
RNU6-239P-201ENST00000390990 TRIM49BA6NDI0 452 aa0.86□□□□□ -2.27
RNU6-239P-201ENST00000390990 TTC36A6NLP5 189 aa0.86□□□□□ -2.27
RNU6-239P-201ENST00000390990 SEC24AO95486 1093 aa0.86□□□□□ -2.27
RNU6-239P-201ENST00000390990 VTNP04004 478 aa0.86□□□□□ -2.27
RNU6-239P-201ENST00000390990 PDHA2P29803 388 aa0.86□□□□□ -2.27
RNU6-239P-201ENST00000390990 HLA-FP30511 346 aa0.86□□□□□ -2.27
RNU6-239P-201ENST00000390990 CPOXP36551 454 aa0.86□□□□□ -2.27
RNU6-239P-201ENST00000390990 SOX3P41225 446 aa0.86□□□□□ -2.27
RNU6-239P-201ENST00000390990 TSFMP43897 325 aaKnown RBP0.86□□□□□ -2.27
RNU6-239P-201ENST00000390990 KHKP50053 298 aa0.86□□□□□ -2.27
RNU6-239P-201ENST00000390990 IGLV3-21P80748 117 aaPredicted RBP0.86□□□□□ -2.27
RNU6-239P-201ENST00000390990 GUCY2DQ02846 1103 aa0.86□□□□□ -2.27
RNU6-239P-201ENST00000390990 GSTA3Q16772 222 aa0.86□□□□□ -2.27
RNU6-239P-201ENST00000390990 LRIF1Q5T3J3 769 aa0.86□□□□□ -2.27
RNU6-239P-201ENST00000390990 TOGARAM2Q6ZUX3 1019 aa0.86□□□□□ -2.27
RNU6-239P-201ENST00000390990 HAUS6Q7Z4H7 955 aa0.86□□□□□ -2.27
RNU6-239P-201ENST00000390990 VASH2Q86V25 355 aa0.86□□□□□ -2.27
RNU6-239P-201ENST00000390990 GPRC5AQ8NFJ5 357 aa0.86□□□□□ -2.27
RNU6-239P-201ENST00000390990 KIR2DL5BQ8NHK3 375 aa0.86□□□□□ -2.27
RNU6-239P-201ENST00000390990 GATAD1Q8WUU5 269 aa0.86□□□□□ -2.27
RNU6-239P-201ENST00000390990 ZBTB10Q96DT7 871 aa0.86□□□□□ -2.27
RNU6-239P-201ENST00000390990 CNRIP1Q96F85 164 aaPredicted RBP0.86□□□□□ -2.27
RNU6-239P-201ENST00000390990 ABHD6Q9BV23 337 aa0.86□□□□□ -2.27
RNU6-239P-201ENST00000390990 SHARPINQ9H0F6 387 aa0.86□□□□□ -2.27
RNU6-239P-201ENST00000390990 EPB41L5Q9HCM4 733 aa0.86□□□□□ -2.27
RNU6-239P-201ENST00000390990 GPN1Q9HCN4 374 aaPredicted RBP0.86□□□□□ -2.27
RNU6-239P-201ENST00000390990 B3GAT2Q9NPZ5 323 aa0.86□□□□□ -2.27
RNU6-239P-201ENST00000390990 KRT84Q9NSB2 600 aa0.86□□□□□ -2.27
RNU6-239P-201ENST00000390990 TRMT1Q9NXH9 659 aaKnown RBP0.86□□□□□ -2.27
RNU6-239P-201ENST00000390990 MPP6Q9NZW5 540 aa0.86□□□□□ -2.27
RNU6-239P-201ENST00000390990 ZNF581Q9P0T4 197 aa0.86□□□□□ -2.27
RNU6-239P-201ENST00000390990 CAPN7Q9Y6W3 813 aa0.86□□□□□ -2.27
RNU6-239P-201ENST00000390990 IGLV4-3A0A075B6K6 122 aa0.85□□□□□ -2.27
RNU6-239P-201ENST00000390990 SPRR5A0A1B0GTR4 108 aa0.85□□□□□ -2.27
RNU6-239P-201ENST00000390990 MED19A0JLT2 244 aaPredicted RBP0.85□□□□□ -2.27
RNU6-239P-201ENST00000390990 MAP2K7O14733 419 aa0.85□□□□□ -2.27
RNU6-239P-201ENST00000390990 ALOX5P09917 674 aa0.85□□□□□ -2.27
RNU6-239P-201ENST00000390990 ZNF853P0CG23 659 aa0.85□□□□□ -2.27
RNU6-239P-201ENST00000390990 HSD3B1P14060 373 aa0.85□□□□□ -2.27
RNU6-239P-201ENST00000390990 PAPOLAP51003 745 aaKnown RBP0.85□□□□□ -2.27
RNU6-239P-201ENST00000390990 RIPK4P57078 832 aa0.85□□□□□ -2.27
RNU6-239P-201ENST00000390990 MRPS34P82930 218 aaKnown RBP0.85□□□□□ -2.27
RNU6-239P-201ENST00000390990 TLE4Q04727 773 aa0.85□□□□□ -2.27
RNU6-239P-201ENST00000390990 DMPKQ09013 629 aa0.85□□□□□ -2.27
RNU6-239P-201ENST00000390990 RUNX3Q13761 415 aa0.85□□□□□ -2.27
RNU6-239P-201ENST00000390990 MEP1AQ16819 746 aa0.85□□□□□ -2.27
RNU6-239P-201ENST00000390990 Q1RN00 199 aa0.85□□□□□ -2.27
RNU6-239P-201ENST00000390990 FAM109BQ6ICB4 259 aaPredicted RBP0.85□□□□□ -2.27
RNU6-239P-201ENST00000390990 CCDC174Q6PII3 467 aa0.85□□□□□ -2.27
RNU6-239P-201ENST00000390990 TSSK4Q6SA08 328 aa0.85□□□□□ -2.27
RNU6-239P-201ENST00000390990 TPRG1Q6ZUI0 275 aa0.85□□□□□ -2.27
RNU6-239P-201ENST00000390990 BBS12Q6ZW61 710 aa0.85□□□□□ -2.27
RNU6-239P-201ENST00000390990 LRRC8DQ7L1W4 858 aa0.85□□□□□ -2.27
RNU6-239P-201ENST00000390990 GALNT13Q8IUC8 556 aa0.85□□□□□ -2.27
RNU6-239P-201ENST00000390990 OR4N5Q8IXE1 308 aa0.85□□□□□ -2.27
RNU6-239P-201ENST00000390990 FAM177A1Q8N128 213 aaPredicted RBP0.85□□□□□ -2.27
RNU6-239P-201ENST00000390990 OR1L3Q8NH93 324 aa0.85□□□□□ -2.27
RNU6-239P-201ENST00000390990 GSDMBQ8TAX9 411 aa0.85□□□□□ -2.27
RNU6-239P-201ENST00000390990 ZCCHC10Q8TBK6 192 aa0.85□□□□□ -2.27
RNU6-239P-201ENST00000390990 AGAP11Q8TF27 550 aa0.85□□□□□ -2.27
RNU6-239P-201ENST00000390990 POF1BQ8WVV4 589 aa0.85□□□□□ -2.27
RNU6-239P-201ENST00000390990 FAM104AQ969W3 186 aa0.85□□□□□ -2.27
RNU6-239P-201ENST00000390990 ZNF799Q96GE5 643 aa0.85□□□□□ -2.27
RNU6-239P-201ENST00000390990 OVOL2Q9BRP0 275 aa0.85□□□□□ -2.27
RNU6-239P-201ENST00000390990 STRA6Q9BX79 667 aa0.85□□□□□ -2.27
RNU6-239P-201ENST00000390990 ARNT2Q9HBZ2 717 aa0.85□□□□□ -2.27
RNU6-239P-201ENST00000390990 OR6C2Q9NZP2 312 aa0.85□□□□□ -2.27
RNU6-239P-201ENST00000390990 NPAP1Q9NZP6 1156 aa0.85□□□□□ -2.27
RNU6-239P-201ENST00000390990 FBXW11Q9UKB1 542 aa0.85□□□□□ -2.27
RNU6-239P-201ENST00000390990 MKLN1Q9UL63 735 aa0.85□□□□□ -2.27
RNU6-239P-201ENST00000390990 RIPOR2Q9Y4F9 1068 aa0.85□□□□□ -2.27
RNU6-239P-201ENST00000390990 WIPI2Q9Y4P8 454 aa0.85□□□□□ -2.27
RNU6-239P-201ENST00000390990 ELOVL7A1L3X0 281 aa0.84□□□□□ -2.27
RNU6-239P-201ENST00000390990 G3V2L1 256 aa0.84□□□□□ -2.27
RNU6-239P-201ENST00000390990 H3BQ06 376 aaPredicted RBP0.84□□□□□ -2.27
RNU6-239P-201ENST00000390990 LATO43561 262 aa0.84□□□□□ -2.27
RNU6-239P-201ENST00000390990 AVILO75366 819 aa0.84□□□□□ -2.27
RNU6-239P-201ENST00000390990 PRDM1O75626 825 aa0.84□□□□□ -2.27
RNU6-239P-201ENST00000390990 IGHV4-31P0DP07 118 aa0.84□□□□□ -2.27
RNU6-239P-201ENST00000390990 PSMC2P35998 433 aaKnown RBP0.84□□□□□ -2.27
RNU6-239P-201ENST00000390990 GGT5P36269 586 aa0.84□□□□□ -2.27
RNU6-239P-201ENST00000390990 PRELPP51888 382 aa0.84□□□□□ -2.27
RNU6-239P-201ENST00000390990 F2RL1P55085 397 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms