RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 HHATLQ9HCP6 504 aa2.03□□□□□ -2.08
RNU6-1040P-201ENST00000383974 WASH6PQ9NQA3 447 aa2.03□□□□□ -2.08
RNU6-1040P-201ENST00000383974 ABCB10Q9NRK6 738 aa2.03□□□□□ -2.08
RNU6-1040P-201ENST00000383974 TUBE1Q9UJT0 475 aa2.03□□□□□ -2.08
RNU6-1040P-201ENST00000383974 OSGIN1Q9UJX0 560 aa2.03□□□□□ -2.08
RNU6-1040P-201ENST00000383974 LAS1LQ9Y4W2 734 aaKnown RBP2.03□□□□□ -2.08
RNU6-1040P-201ENST00000383974 LYVE1Q9Y5Y7 322 aa2.03□□□□□ -2.08
RNU6-1040P-201ENST00000383974 MPTX1A8MV57 137 aa2.02□□□□□ -2.09
RNU6-1040P-201ENST00000383974 IFRD1O00458 451 aaPredicted RBP2.02□□□□□ -2.09
RNU6-1040P-201ENST00000383974 GAPDHSO14556 408 aaPredicted RBP2.02□□□□□ -2.09
RNU6-1040P-201ENST00000383974 NDUFS4O43181 175 aa2.02□□□□□ -2.09
RNU6-1040P-201ENST00000383974 GPC4O75487 556 aa2.02□□□□□ -2.09
RNU6-1040P-201ENST00000383974 DFFBO76075 338 aa2.02□□□□□ -2.09
RNU6-1040P-201ENST00000383974 GH2P01242 217 aa2.02□□□□□ -2.09
RNU6-1040P-201ENST00000383974 ACTN1P12814 892 aa2.02□□□□□ -2.09
RNU6-1040P-201ENST00000383974 MAPK9P45984 424 aa2.02□□□□□ -2.09
RNU6-1040P-201ENST00000383974 CX3CL1P78423 397 aa2.02□□□□□ -2.09
RNU6-1040P-201ENST00000383974 DMPKQ09013 629 aa2.02□□□□□ -2.09
RNU6-1040P-201ENST00000383974 MOGAT2Q3SYC2 334 aa2.02□□□□□ -2.09
RNU6-1040P-201ENST00000383974 RARS2Q5T160 578 aaKnown RBP2.02□□□□□ -2.09
RNU6-1040P-201ENST00000383974 INTS11Q5TA45 600 aaKnown RBP2.02□□□□□ -2.09
RNU6-1040P-201ENST00000383974 BTN2A1Q7KYR7 527 aa2.02□□□□□ -2.09
RNU6-1040P-201ENST00000383974 R3HCC1LQ7Z5L2 792 aaKnown RBP2.02□□□□□ -2.09
RNU6-1040P-201ENST00000383974 ZNF354CQ86Y25 554 aa2.02□□□□□ -2.09
RNU6-1040P-201ENST00000383974 AQP11Q8NBQ7 271 aa2.02□□□□□ -2.09
RNU6-1040P-201ENST00000383974 OR10G8Q8NGN5 311 aa2.02□□□□□ -2.09
RNU6-1040P-201ENST00000383974 VANGL1Q8TAA9 524 aaPredicted RBP2.02□□□□□ -2.09
RNU6-1040P-201ENST00000383974 ETNPPLQ8TBG4 499 aa2.02□□□□□ -2.09
RNU6-1040P-201ENST00000383974 TBC1D16Q8TBP0 767 aa2.02□□□□□ -2.09
RNU6-1040P-201ENST00000383974 RNF128Q8TEB7 428 aa2.02□□□□□ -2.09
RNU6-1040P-201ENST00000383974 FAM81BQ96LP2 452 aa2.02□□□□□ -2.09
RNU6-1040P-201ENST00000383974 GAL3ST4Q96RP7 486 aa2.02□□□□□ -2.09
RNU6-1040P-201ENST00000383974 FNBP1Q96RU3 617 aa2.02□□□□□ -2.09
RNU6-1040P-201ENST00000383974 RTN4RQ9BZR6 473 aa2.02□□□□□ -2.09
RNU6-1040P-201ENST00000383974 VN1R1Q9GZP7 353 aa2.02□□□□□ -2.09
RNU6-1040P-201ENST00000383974 DNAJC18Q9H819 358 aa2.02□□□□□ -2.09
RNU6-1040P-201ENST00000383974 CHST11Q9NPF2 352 aa2.02□□□□□ -2.09
RNU6-1040P-201ENST00000383974 TEX10Q9NXF1 929 aaPredicted RBP2.02□□□□□ -2.09
RNU6-1040P-201ENST00000383974 SAGE1Q9NXZ1 904 aa2.02□□□□□ -2.09
RNU6-1040P-201ENST00000383974 SLC13A4Q9UKG4 626 aa2.02□□□□□ -2.09
RNU6-1040P-201ENST00000383974 PNMA2Q9UL42 364 aa2.02□□□□□ -2.09
RNU6-1040P-201ENST00000383974 A0A1W2PPH5 198 aa2.01□□□□□ -2.09
RNU6-1040P-201ENST00000383974 ACOD1A6NK06 481 aa2.01□□□□□ -2.09
RNU6-1040P-201ENST00000383974 SCAMP1O15126 338 aa2.01□□□□□ -2.09
RNU6-1040P-201ENST00000383974 HPRP00739 348 aa2.01□□□□□ -2.09
RNU6-1040P-201ENST00000383974 PYGLP06737 847 aa2.01□□□□□ -2.09
RNU6-1040P-201ENST00000383974 PRKACGP22612 351 aa2.01□□□□□ -2.09
RNU6-1040P-201ENST00000383974 CYCSP99999 105 aaKnown RBP2.01□□□□□ -2.09
RNU6-1040P-201ENST00000383974 ZFP36L1Q07352 338 aaKnown RBP2.01□□□□□ -2.09
RNU6-1040P-201ENST00000383974 BIRC3Q13489 604 aa2.01□□□□□ -2.09
RNU6-1040P-201ENST00000383974 EIF4A2Q14240 407 aaKnown RBP2.01□□□□□ -2.09
RNU6-1040P-201ENST00000383974 MED22Q15528 200 aa2.01□□□□□ -2.09
RNU6-1040P-201ENST00000383974 C15orf32Q32M92 178 aa2.01□□□□□ -2.09
RNU6-1040P-201ENST00000383974 ZSCAN23Q3MJ62 389 aa2.01□□□□□ -2.09
RNU6-1040P-201ENST00000383974 HIGD2BQ4VC39 106 aa2.01□□□□□ -2.09
RNU6-1040P-201ENST00000383974 CFAP77Q6ZQR2 320 aa2.01□□□□□ -2.09
RNU6-1040P-201ENST00000383974 FAM114A1Q8IWE2 563 aa2.01□□□□□ -2.09
RNU6-1040P-201ENST00000383974 DIS3L2Q8IYB7 885 aaKnown RBP2.01□□□□□ -2.09
RNU6-1040P-201ENST00000383974 SLC34A3Q8N130 599 aa2.01□□□□□ -2.09
RNU6-1040P-201ENST00000383974 KCNG4Q8TDN1 519 aa2.01□□□□□ -2.09
RNU6-1040P-201ENST00000383974 ARSGQ96EG1 525 aa2.01□□□□□ -2.09
RNU6-1040P-201ENST00000383974 DACH2Q96NX9 599 aa2.01□□□□□ -2.09
RNU6-1040P-201ENST00000383974 GNB4Q9HAV0 340 aa2.01□□□□□ -2.09
RNU6-1040P-201ENST00000383974 SMC4Q9NTJ3 1288 aa2.01□□□□□ -2.09
RNU6-1040P-201ENST00000383974 RHCGQ9UBD6 479 aa2.01□□□□□ -2.09
RNU6-1040P-201ENST00000383974 CLIP2Q9UDT6 1046 aa2.01□□□□□ -2.09
RNU6-1040P-201ENST00000383974 GRID1Q9ULK0 1009 aa2.01□□□□□ -2.09
RNU6-1040P-201ENST00000383974 LRRFIP2Q9Y608 721 aaKnown RBP2.01□□□□□ -2.09
RNU6-1040P-201ENST00000383974 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.01□□□□□ -2.09
RNU6-1040P-201ENST00000383974 A0A1W2PR80 420 aa2□□□□□ -2.09
RNU6-1040P-201ENST00000383974 PHOX2AO14813 284 aa2□□□□□ -2.09
RNU6-1040P-201ENST00000383974 TO15178 435 aa2□□□□□ -2.09
RNU6-1040P-201ENST00000383974 EIF2S1P05198 315 aaKnown RBP2□□□□□ -2.09
RNU6-1040P-201ENST00000383974 IGHV4-31P0DP07 118 aa2□□□□□ -2.09
RNU6-1040P-201ENST00000383974 FOLR2P14207 255 aa2□□□□□ -2.09
RNU6-1040P-201ENST00000383974 TMEM11P17152 192 aa2□□□□□ -2.09
RNU6-1040P-201ENST00000383974 PDX1P52945 283 aa2□□□□□ -2.09
RNU6-1040P-201ENST00000383974 TMEM50BP56557 158 aa2□□□□□ -2.09
RNU6-1040P-201ENST00000383974 HERV-K104P61576 105 aa2□□□□□ -2.09
RNU6-1040P-201ENST00000383974 KCNC3Q14003 757 aa2□□□□□ -2.09
RNU6-1040P-201ENST00000383974 SQLEQ14534 574 aa2□□□□□ -2.09
RNU6-1040P-201ENST00000383974 TBCEQ15813 527 aaPredicted RBP2□□□□□ -2.09
RNU6-1040P-201ENST00000383974 ASTE1Q2TB18 679 aaPredicted RBP2□□□□□ -2.09
RNU6-1040P-201ENST00000383974 SLC25A53Q5H9E4 307 aa2□□□□□ -2.09
RNU6-1040P-201ENST00000383974 MDH1BQ5I0G3 518 aa2□□□□□ -2.09
RNU6-1040P-201ENST00000383974 GKAP1Q5VSY0 366 aaPredicted RBP2□□□□□ -2.09
RNU6-1040P-201ENST00000383974 CLEC17AQ6ZS10 378 aa2□□□□□ -2.09
RNU6-1040P-201ENST00000383974 TMTC2Q8N394 836 aa2□□□□□ -2.09
RNU6-1040P-201ENST00000383974 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2□□□□□ -2.09
RNU6-1040P-201ENST00000383974 TRIML1Q8N9V2 468 aa2□□□□□ -2.09
RNU6-1040P-201ENST00000383974 ZNF486Q96H40 463 aaPredicted RBP2□□□□□ -2.09
RNU6-1040P-201ENST00000383974 OR2A14Q96R47 310 aa2□□□□□ -2.09
RNU6-1040P-201ENST00000383974 S1PR5Q9H228 398 aa2□□□□□ -2.09
RNU6-1040P-201ENST00000383974 PLK3Q9H4B4 646 aa2□□□□□ -2.09
RNU6-1040P-201ENST00000383974 PAG1Q9NWQ8 432 aa2□□□□□ -2.09
RNU6-1040P-201ENST00000383974 MTUS1Q9ULD2 1270 aa2□□□□□ -2.09
RNU6-1040P-201ENST00000383974 CELA1Q9UNI1 258 aa2□□□□□ -2.09
RNU6-1040P-201ENST00000383974 PPP2R2CQ9Y2T4 447 aa2□□□□□ -2.09
RNU6-1040P-201ENST00000383974 PCDHGA5Q9Y5G8 931 aa2□□□□□ -2.09
RNU6-1040P-201ENST00000383974 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms