RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 CHEK2O96017 543 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 CCDC159P0C7I6 412 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 PTPN2P17706 415 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 TSPAN8P19075 237 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 FDXRP22570 491 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 HTR1BP28222 390 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 RGRP47804 291 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 KCNC1P48547 511 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 GSSP48637 474 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 SUOXP51687 545 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 CDH13P55290 713 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 CHRNB3Q05901 458 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 PHKG1Q16816 387 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 GLYATQ6IB77 296 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 GAREM2Q75VX8 874 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 SLCO6A1Q86UG4 719 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 TMC8Q8IU68 726 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 FAM217AQ8IXS0 508 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 CHDHQ8NE62 594 aaPredicted RBP8.78□□□□□ -1
GPNMB-202ENST00000381990 ITFG1Q8TB96 612 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 BRSK1Q8TDC3 778 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 SLC22A17Q8WUG5 538 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 C17orf50Q8WW18 174 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 ZNF566Q969W8 418 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 ISG20Q96AZ6 181 aaKnown RBP8.78□□□□□ -1
GPNMB-202ENST00000381990 PTERQ96BW5 349 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 NODALQ96S42 347 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 RBM4BQ9BQ04 359 aaKnown RBP8.78□□□□□ -1
GPNMB-202ENST00000381990 RBM4Q9BWF3 364 aaKnown RBP8.78□□□□□ -1
GPNMB-202ENST00000381990 TOR3AQ9H497 397 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 TUBB1Q9H4B7 451 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 TFB2MQ9H5Q4 396 aaKnown RBP8.78□□□□□ -1
GPNMB-202ENST00000381990 FAM118AQ9NWS6 357 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.78□□□□□ -1
GPNMB-202ENST00000381990 RIMKLBQ9ULI2 386 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 ARIH1Q9Y4X5 557 aaPredicted RBP8.78□□□□□ -1
GPNMB-202ENST00000381990 PCDHGA8Q9Y5G5 932 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 FAM234BA2RU67 622 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 ASPDHA6ND91 283 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 IFRD1O00458 451 aaPredicted RBP8.78□□□□□ -1
GPNMB-202ENST00000381990 CRCPO75575 148 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 CKMP06732 381 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 C8AP07357 584 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 POLR2JP52435 117 aaKnown RBP8.78□□□□□ -1
GPNMB-202ENST00000381990 CDKN2DP55273 166 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 SLC7A9P82251 487 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 ZXDBP98169 803 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 CYP4F8P98187 520 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 CDC20Q12834 499 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 GALNT3Q14435 633 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 ACOX1Q15067 660 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 ZIK1Q3SY52 487 aaPredicted RBP8.78□□□□□ -1
GPNMB-202ENST00000381990 PYCR3Q53H96 274 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 TMEM207Q6UWW9 146 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 STK32CQ86UX6 486 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 ZBTB46Q86UZ6 589 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 HS6ST3Q8IZP7 471 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 ELMOD1Q8N336 334 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 CARNMT1Q8N4J0 409 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 KREMEN2Q8NCW0 462 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 OR6P1Q8NGX9 317 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 BLOC1S5Q8TDH9 187 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 HPS1Q92902 700 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 CCDC115Q96NT0 180 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 CTRCQ99895 268 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 SP140LQ9H930 580 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 SCUBE2Q9NQ36 999 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 C3orf18Q9UK00 162 aa8.78□□□□□ -1
GPNMB-202ENST00000381990 ISPDA4D126 451 aa8.77□□□□□ -1.01
GPNMB-202ENST00000381990 ZNF99A8MXY4 864 aaPredicted RBP8.77□□□□□ -1.01
GPNMB-202ENST00000381990 H3BMM5 538 aa8.77□□□□□ -1.01
GPNMB-202ENST00000381990 M0R3G1 203 aa8.77□□□□□ -1.01
GPNMB-202ENST00000381990 SCAMP3O14828 347 aaKnown RBP8.77□□□□□ -1.01
GPNMB-202ENST00000381990 NDUFS2O75306 463 aa8.77□□□□□ -1.01
GPNMB-202ENST00000381990 S1PR4O95977 384 aa8.77□□□□□ -1.01
GPNMB-202ENST00000381990 ANXA6P08133 673 aa8.77□□□□□ -1.01
GPNMB-202ENST00000381990 HTR1AP08908 422 aa8.77□□□□□ -1.01
GPNMB-202ENST00000381990 LINC00032P0C843 101 aa8.77□□□□□ -1.01
GPNMB-202ENST00000381990 PCMT1P22061 227 aa8.77□□□□□ -1.01
GPNMB-202ENST00000381990 MTHFRP42898 656 aa8.77□□□□□ -1.01
GPNMB-202ENST00000381990 ARSDP51689 593 aa8.77□□□□□ -1.01
GPNMB-202ENST00000381990 DIO3P55073 304 aa8.77□□□□□ -1.01
GPNMB-202ENST00000381990 FOXA1P55317 472 aa8.77□□□□□ -1.01
GPNMB-202ENST00000381990 ERVK-8P63133 956 aa8.77□□□□□ -1.01
GPNMB-202ENST00000381990 YBX1P67809 324 aaKnown RBP8.77□□□□□ -1.01
GPNMB-202ENST00000381990 ARF5P84085 180 aa8.77□□□□□ -1.01
GPNMB-202ENST00000381990 PPP2R2BQ00005 443 aa8.77□□□□□ -1.01
GPNMB-202ENST00000381990 CLCQ05315 142 aa8.77□□□□□ -1.01
GPNMB-202ENST00000381990 FPGSQ05932 587 aa8.77□□□□□ -1.01
GPNMB-202ENST00000381990 PFKFB4Q16877 469 aa8.77□□□□□ -1.01
GPNMB-202ENST00000381990 RFX4Q33E94 735 aa8.77□□□□□ -1.01
GPNMB-202ENST00000381990 INO80DQ53TQ3 878 aaPredicted RBP8.77□□□□□ -1.01
GPNMB-202ENST00000381990 PAGE3Q5JUK9 113 aa8.77□□□□□ -1.01
GPNMB-202ENST00000381990 HTR3DQ70Z44 454 aa8.77□□□□□ -1.01
GPNMB-202ENST00000381990 LACC1Q8IV20 430 aa8.77□□□□□ -1.01
GPNMB-202ENST00000381990 ZCCHC7Q8N3Z6 543 aaKnown RBP8.77□□□□□ -1.01
GPNMB-202ENST00000381990 PHF10Q8WUB8 498 aaKnown RBP8.77□□□□□ -1.01
GPNMB-202ENST00000381990 VPS33AQ96AX1 596 aa8.77□□□□□ -1.01
GPNMB-202ENST00000381990 OSBPL10Q9BXB5 764 aa8.77□□□□□ -1.01
GPNMB-202ENST00000381990 EMILIN2Q9BXX0 1053 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms