RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 IRGCQ6NXR0 463 aa18.88■□□□□ 0.61
GTF3A-201ENST00000381140 TMEM71Q6P5X7 295 aa18.88■□□□□ 0.61
GTF3A-201ENST00000381140 HDXQ7Z353 690 aa18.88■□□□□ 0.61
GTF3A-201ENST00000381140 SPNS2Q8IVW8 549 aa18.88■□□□□ 0.61
GTF3A-201ENST00000381140 ZBTB2Q8N680 514 aa18.88■□□□□ 0.61
GTF3A-201ENST00000381140 ACVR1CQ8NER5 493 aa18.88■□□□□ 0.61
GTF3A-201ENST00000381140 OR4E2Q8NGC2 313 aa18.88■□□□□ 0.61
GTF3A-201ENST00000381140 DPYSL5Q9BPU6 564 aa18.88■□□□□ 0.61
GTF3A-201ENST00000381140 TRIT1Q9H3H1 467 aaKnown RBP18.88■□□□□ 0.61
GTF3A-201ENST00000381140 MVB12BQ9H7P6 319 aa18.88■□□□□ 0.61
GTF3A-201ENST00000381140 ZFATQ9P243 1243 aa18.88■□□□□ 0.61
GTF3A-201ENST00000381140 SLCO2B1O94956 709 aa18.87■□□□□ 0.61
GTF3A-201ENST00000381140 HGFP14210 728 aa18.87■□□□□ 0.61
GTF3A-201ENST00000381140 MAGEA4P43358 317 aa18.87■□□□□ 0.61
GTF3A-201ENST00000381140 LIMK2P53671 638 aa18.87■□□□□ 0.61
GTF3A-201ENST00000381140 CYP4F3Q08477 520 aa18.87■□□□□ 0.61
GTF3A-201ENST00000381140 SQSTM1Q13501 440 aa18.87■□□□□ 0.61
GTF3A-201ENST00000381140 CASP8Q14790 479 aa18.87■□□□□ 0.61
GTF3A-201ENST00000381140 C16orf72Q14CZ0 275 aa18.87■□□□□ 0.61
GTF3A-201ENST00000381140 PLEKHS1Q5SXH7 462 aa18.87■□□□□ 0.61
GTF3A-201ENST00000381140 WDR74Q6RFH5 385 aaPredicted RBP18.87■□□□□ 0.61
GTF3A-201ENST00000381140 RAB11FIP2Q7L804 512 aa18.87■□□□□ 0.61
GTF3A-201ENST00000381140 PLXDC1Q8IUK5 500 aa18.87■□□□□ 0.61
GTF3A-201ENST00000381140 CNTN4Q8IWV2 1026 aa18.87■□□□□ 0.61
GTF3A-201ENST00000381140 SIDT2Q8NBJ9 832 aaKnown RBP18.87■□□□□ 0.61
GTF3A-201ENST00000381140 WDR36Q8NI36 951 aaKnown RBP18.87■□□□□ 0.61
GTF3A-201ENST00000381140 MDM1Q8TC05 714 aa18.87■□□□□ 0.61
GTF3A-201ENST00000381140 LCN9Q8WX39 176 aa18.87■□□□□ 0.61
GTF3A-201ENST00000381140 GRAMD1AQ96CP6 724 aa18.87■□□□□ 0.61
GTF3A-201ENST00000381140 NRTNQ99748 197 aa18.87■□□□□ 0.61
GTF3A-201ENST00000381140 TMEM121BQ9BXQ6 578 aaPredicted RBP18.87■□□□□ 0.61
GTF3A-201ENST00000381140 FUT8Q9BYC5 575 aa18.87■□□□□ 0.61
GTF3A-201ENST00000381140 NRSN2Q9GZP1 204 aa18.87■□□□□ 0.61
GTF3A-201ENST00000381140 XKR8Q9H6D3 395 aa18.87■□□□□ 0.61
GTF3A-201ENST00000381140 CIDEBQ9UHD4 219 aa18.87■□□□□ 0.61
GTF3A-201ENST00000381140 PLAGL1Q9UM63 463 aa18.87■□□□□ 0.61
GTF3A-201ENST00000381140 RUVBL2Q9Y230 463 aaKnown RBP18.87■□□□□ 0.61
GTF3A-201ENST00000381140 TPRP12270 2363 aaKnown RBP18.86■□□□□ 0.61
GTF3A-201ENST00000381140 A0A1W2PNU3 283 aaPredicted RBP18.86■□□□□ 0.61
GTF3A-201ENST00000381140 OR6C74A6NCV1 312 aa18.86■□□□□ 0.61
GTF3A-201ENST00000381140 CAPN5O15484 640 aaPredicted RBP18.86■□□□□ 0.61
GTF3A-201ENST00000381140 PIAS1O75925 651 aa18.86■□□□□ 0.61
GTF3A-201ENST00000381140 AHSGP02765 367 aa18.86■□□□□ 0.61
GTF3A-201ENST00000381140 THRAP10827 490 aa18.86■□□□□ 0.61
GTF3A-201ENST00000381140 GABRB3P28472 473 aa18.86■□□□□ 0.61
GTF3A-201ENST00000381140 CAPZBP47756 277 aa18.86■□□□□ 0.61
GTF3A-201ENST00000381140 PPP1CAP62136 330 aa18.86■□□□□ 0.61
GTF3A-201ENST00000381140 RBM20Q5T481 1227 aaKnown RBP18.86■□□□□ 0.61
GTF3A-201ENST00000381140 ARMC6Q6NXE6 501 aa18.86■□□□□ 0.61
GTF3A-201ENST00000381140 KLHL35Q6PF15 583 aa18.86■□□□□ 0.61
GTF3A-201ENST00000381140 FAM92BQ6ZTR7 304 aa18.86■□□□□ 0.61
GTF3A-201ENST00000381140 KIAA0408Q6ZU52 694 aa18.86■□□□□ 0.61
GTF3A-201ENST00000381140 FBXO39Q8N4B4 442 aa18.86■□□□□ 0.61
GTF3A-201ENST00000381140 GPATCH11Q8N954 259 aa18.86■□□□□ 0.61
GTF3A-201ENST00000381140 OR52E1Q8NGJ3 308 aa18.86■□□□□ 0.61
GTF3A-201ENST00000381140 ZFPM2Q8WW38 1151 aa18.86■□□□□ 0.61
GTF3A-201ENST00000381140 LIN37Q96GY3 246 aaPredicted RBP18.86■□□□□ 0.61
GTF3A-201ENST00000381140 GPR21Q99679 349 aa18.86■□□□□ 0.61
GTF3A-201ENST00000381140 SLC30A3Q99726 388 aa18.86■□□□□ 0.61
GTF3A-201ENST00000381140 AARSD1Q9BTE6 412 aaKnown RBP18.86■□□□□ 0.61
GTF3A-201ENST00000381140 SRMSQ9H3Y6 488 aa18.86■□□□□ 0.61
GTF3A-201ENST00000381140 AKAP7Q9P0M2 348 aaPredicted RBP18.86■□□□□ 0.61
GTF3A-201ENST00000381140 LOXL2Q9Y4K0 774 aa18.86■□□□□ 0.61
GTF3A-201ENST00000381140 SNRNP200O75643 2136 aaKnown RBP18.86■□□□□ 0.61
GTF3A-201ENST00000381140 MAP2K7O14733 419 aa18.85■□□□□ 0.61
GTF3A-201ENST00000381140 VPS26AO75436 327 aa18.85■□□□□ 0.61
GTF3A-201ENST00000381140 RASSF9O75901 435 aa18.85■□□□□ 0.61
GTF3A-201ENST00000381140 PMS2P54278 862 aa18.85■□□□□ 0.61
GTF3A-201ENST00000381140 FRG1Q14331 258 aaKnown RBP18.85■□□□□ 0.61
GTF3A-201ENST00000381140 ACSBG2Q5FVE4 666 aa18.85■□□□□ 0.61
GTF3A-201ENST00000381140 C3orf62Q6ZUJ4 267 aa18.85■□□□□ 0.61
GTF3A-201ENST00000381140 TRMT10CQ7L0Y3 403 aaKnown RBP18.85■□□□□ 0.61
GTF3A-201ENST00000381140 STRA8Q7Z7C7 330 aa18.85■□□□□ 0.61
GTF3A-201ENST00000381140 OOSP2Q86WS3 158 aa18.85■□□□□ 0.61
GTF3A-201ENST00000381140 TBC1D21Q8IYX1 336 aa18.85■□□□□ 0.61
GTF3A-201ENST00000381140 CNTNAP3BQ96NU0 1288 aa18.85■□□□□ 0.61
GTF3A-201ENST00000381140 CNTNAP3Q9BZ76 1288 aa18.85■□□□□ 0.61
GTF3A-201ENST00000381140 CCDC86Q9H6F5 360 aaKnown RBP18.85■□□□□ 0.61
GTF3A-201ENST00000381140 VIPAS39Q9H9C1 493 aa18.85■□□□□ 0.61
GTF3A-201ENST00000381140 POLR1BQ9H9Y6 1135 aa18.85■□□□□ 0.61
GTF3A-201ENST00000381140 HRASLS2Q9NWW9 162 aa18.85■□□□□ 0.61
GTF3A-201ENST00000381140 MOCS1Q9NZB8 636 aa18.85■□□□□ 0.61
GTF3A-201ENST00000381140 PISDQ9UG56 409 aa18.85■□□□□ 0.61
GTF3A-201ENST00000381140 PSAT1Q9Y617 370 aa18.85■□□□□ 0.61
GTF3A-201ENST00000381140 NFS1Q9Y697 457 aa18.85■□□□□ 0.61
GTF3A-201ENST00000381140 COMMD10Q9Y6G5 202 aa18.85■□□□□ 0.61
GTF3A-201ENST00000381140 MN1Q10571 1320 aaPredicted RBP18.85■□□□□ 0.61
GTF3A-201ENST00000381140 PLD2O14939 933 aa18.84■□□□□ 0.61
GTF3A-201ENST00000381140 KIF1CO43896 1103 aaKnown RBP18.84■□□□□ 0.61
GTF3A-201ENST00000381140 BRINP1O60477 761 aa18.84■□□□□ 0.61
GTF3A-201ENST00000381140 JMJD7P0C870 316 aa18.84■□□□□ 0.61
GTF3A-201ENST00000381140 POLR2CP19387 275 aaPredicted RBP18.84■□□□□ 0.61
GTF3A-201ENST00000381140 CSTF2P33240 577 aaKnown RBP eCLIP18.84■□□□□ 0.61
GTF3A-201ENST00000381140 BDKRB1P46663 353 aa18.84■□□□□ 0.61
GTF3A-201ENST00000381140 CLCN7P51798 805 aa18.84■□□□□ 0.61
GTF3A-201ENST00000381140 GPX6P59796 221 aa18.84■□□□□ 0.61
GTF3A-201ENST00000381140 RTP5Q14D33 572 aa18.84■□□□□ 0.61
GTF3A-201ENST00000381140 TTLL9Q3SXZ7 439 aa18.84■□□□□ 0.61
GTF3A-201ENST00000381140 OR5K2Q8NHB8 316 aa18.84■□□□□ 0.61
GTF3A-201ENST00000381140 GIMAP7Q8NHV1 300 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms