RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 PHF12Q96QT6 1004 aa15.78■□□□□ 0.12
COL2A1-202ENST00000380518 GPER1Q99527 375 aa15.78■□□□□ 0.12
COL2A1-202ENST00000380518 ABCG4Q9H172 646 aa15.78■□□□□ 0.12
COL2A1-202ENST00000380518 TRNAU1APQ9NX07 287 aaKnown RBP15.78■□□□□ 0.12
COL2A1-202ENST00000380518 FNIP2Q9P278 1114 aa15.78■□□□□ 0.12
COL2A1-202ENST00000380518 PRSS55Q6UWB4 352 aaPredicted RBP15.78■□□□□ 0.12
COL2A1-202ENST00000380518 USP30Q70CQ3 517 aa15.78■□□□□ 0.12
COL2A1-202ENST00000380518 MIPEPQ99797 713 aa15.78■□□□□ 0.12
COL2A1-202ENST00000380518 COPS4Q9BT78 406 aa15.78■□□□□ 0.12
COL2A1-202ENST00000380518 PDPK1O15530 556 aa15.77■□□□□ 0.12
COL2A1-202ENST00000380518 POU2F1P14859 743 aa15.77■□□□□ 0.12
COL2A1-202ENST00000380518 ZNF280AP59817 542 aaPredicted RBP15.77■□□□□ 0.12
COL2A1-202ENST00000380518 DCAF12L1Q5VU92 463 aa15.77■□□□□ 0.12
COL2A1-202ENST00000380518 OTOP2Q7RTS6 562 aa15.77■□□□□ 0.12
COL2A1-202ENST00000380518 REM2Q8IYK8 340 aaPredicted RBP15.77■□□□□ 0.12
COL2A1-202ENST00000380518 RNF31Q96EP0 1072 aa15.77■□□□□ 0.12
COL2A1-202ENST00000380518 TMEM209Q96SK2 561 aa15.77■□□□□ 0.12
COL2A1-202ENST00000380518 PTPN18Q99952 460 aa15.77■□□□□ 0.12
COL2A1-202ENST00000380518 MAP10Q9P2G4 905 aa15.77■□□□□ 0.12
COL2A1-202ENST00000380518 LRRC72A6NJI9 287 aa15.77■□□□□ 0.12
COL2A1-202ENST00000380518 FAM159BA6NKW6 160 aa15.77■□□□□ 0.12
COL2A1-202ENST00000380518 HLA-DQB2P05538 268 aa15.77■□□□□ 0.12
COL2A1-202ENST00000380518 C8AP07357 584 aa15.77■□□□□ 0.12
COL2A1-202ENST00000380518 ANXA8P13928 327 aa15.77■□□□□ 0.12
COL2A1-202ENST00000380518 TMEM192Q8IY95 271 aa15.77■□□□□ 0.12
COL2A1-202ENST00000380518 METTL21AQ8WXB1 218 aa15.77■□□□□ 0.12
COL2A1-202ENST00000380518 HAVCR1Q96D42 359 aa15.77■□□□□ 0.12
COL2A1-202ENST00000380518 MTERF1Q99551 399 aaKnown RBP15.77■□□□□ 0.12
COL2A1-202ENST00000380518 PIGVQ9NUD9 493 aa15.77■□□□□ 0.12
COL2A1-202ENST00000380518 RWDD3Q9Y3V2 267 aa15.77■□□□□ 0.12
COL2A1-202ENST00000380518 PRORSD1PA6NEY8 169 aa15.77■□□□□ 0.12
COL2A1-202ENST00000380518 PRPS1L1P21108 318 aa15.77■□□□□ 0.12
COL2A1-202ENST00000380518 GRIA1P42261 906 aa15.77■□□□□ 0.12
COL2A1-202ENST00000380518 MINDY4Q4G0A6 757 aa15.77■□□□□ 0.12
COL2A1-202ENST00000380518 TMEM198Q66K66 360 aa15.77■□□□□ 0.12
COL2A1-202ENST00000380518 FRRS1Q6ZNA5 592 aa15.77■□□□□ 0.12
COL2A1-202ENST00000380518 TAF8Q7Z7C8 310 aa15.77■□□□□ 0.12
COL2A1-202ENST00000380518 TSEN15Q8WW01 171 aaKnown RBP15.77■□□□□ 0.12
COL2A1-202ENST00000380518 LPIN3Q9BQK8 851 aa15.77■□□□□ 0.12
COL2A1-202ENST00000380518 ZDHHC4Q9NPG8 344 aa15.77■□□□□ 0.12
COL2A1-202ENST00000380518 TCRBV7S3A2A0A539 114 aa15.77■□□□□ 0.11
COL2A1-202ENST00000380518 TMEM88BA6NKF7 163 aa15.77■□□□□ 0.11
COL2A1-202ENST00000380518 EFNA1P20827 205 aaPredicted RBP15.77■□□□□ 0.11
COL2A1-202ENST00000380518 RPS24P62847 133 aaKnown RBP15.77■□□□□ 0.11
COL2A1-202ENST00000380518 TMEM44Q2T9K0 475 aa15.77■□□□□ 0.11
COL2A1-202ENST00000380518 LCN1P1Q5VSP4 162 aa15.77■□□□□ 0.11
COL2A1-202ENST00000380518 PGRP06401 933 aa15.76■□□□□ 0.11
COL2A1-202ENST00000380518 AP3S2P59780 193 aa15.76■□□□□ 0.11
COL2A1-202ENST00000380518 HID1Q8IV36 788 aa15.76■□□□□ 0.11
COL2A1-202ENST00000380518 AHI1Q8N157 1196 aa15.76■□□□□ 0.11
COL2A1-202ENST00000380518 KCTD13Q8WZ19 329 aa15.76■□□□□ 0.11
COL2A1-202ENST00000380518 ASB9Q96DX5 294 aa15.76■□□□□ 0.11
COL2A1-202ENST00000380518 ZNF536O15090 1300 aa15.76■□□□□ 0.11
COL2A1-202ENST00000380518 PRODHO43272 600 aa15.76■□□□□ 0.11
COL2A1-202ENST00000380518 PLA2G16P53816 162 aa15.76■□□□□ 0.11
COL2A1-202ENST00000380518 RNASE12Q5GAN4 147 aaKnown RBP15.76■□□□□ 0.11
COL2A1-202ENST00000380518 OR4C6Q8NH72 309 aa15.76■□□□□ 0.11
COL2A1-202ENST00000380518 CDKN2AIPNLQ96HQ2 116 aa15.76■□□□□ 0.11
COL2A1-202ENST00000380518 TRIM2Q9C040 744 aa15.76■□□□□ 0.11
COL2A1-202ENST00000380518 PCDHAC1Q9H158 963 aa15.76■□□□□ 0.11
COL2A1-202ENST00000380518 C11orf16Q9NQ32 467 aa15.76■□□□□ 0.11
COL2A1-202ENST00000380518 ABCB8Q9NUT2 735 aa15.76■□□□□ 0.11
COL2A1-202ENST00000380518 RBPJLQ9UBG7 517 aa15.76■□□□□ 0.11
COL2A1-202ENST00000380518 M0R2N6 131 aa15.76■□□□□ 0.11
COL2A1-202ENST00000380518 EI24O14681 340 aa15.76■□□□□ 0.11
COL2A1-202ENST00000380518 RSL1D1O76021 490 aaKnown RBP15.76■□□□□ 0.11
COL2A1-202ENST00000380518 ALAS2P22557 587 aa15.76■□□□□ 0.11
COL2A1-202ENST00000380518 AZGP1P25311 298 aaKnown RBP15.76■□□□□ 0.11
COL2A1-202ENST00000380518 KHKP50053 298 aa15.76■□□□□ 0.11
COL2A1-202ENST00000380518 SLC30A8Q8IWU4 369 aa15.76■□□□□ 0.11
COL2A1-202ENST00000380518 KREMEN2Q8NCW0 462 aa15.76■□□□□ 0.11
COL2A1-202ENST00000380518 HERVK_113Q902F9 699 aa15.76■□□□□ 0.11
COL2A1-202ENST00000380518 GSDMCQ9BYG8 508 aa15.76■□□□□ 0.11
COL2A1-202ENST00000380518 OR51F1A6NGY5 319 aa15.76■□□□□ 0.11
COL2A1-202ENST00000380518 CPSF4LA6NMK7 179 aaKnown RBP15.76■□□□□ 0.11
COL2A1-202ENST00000380518 RPLP0P05388 317 aaKnown RBP15.76■□□□□ 0.11
COL2A1-202ENST00000380518 SLC10A7Q0GE19 358 aa15.76■□□□□ 0.11
COL2A1-202ENST00000380518 TXNRD3NBQ6F5E7 133 aa15.76■□□□□ 0.11
COL2A1-202ENST00000380518 SATL1Q86VE3 508 aa15.76■□□□□ 0.11
COL2A1-202ENST00000380518 ZNF384Q8TF68 577 aa15.76■□□□□ 0.11
COL2A1-202ENST00000380518 KBTBD7Q8WVZ9 684 aa15.76■□□□□ 0.11
COL2A1-202ENST00000380518 EFCAB11Q9BUY7 163 aa15.76■□□□□ 0.11
COL2A1-202ENST00000380518 BCAS3Q9H6U6 928 aa15.76■□□□□ 0.11
COL2A1-202ENST00000380518 SMURF2Q9HAU4 748 aa15.76■□□□□ 0.11
COL2A1-202ENST00000380518 ASB3Q9Y575 518 aa15.76■□□□□ 0.11
COL2A1-202ENST00000380518 A8MT66 165 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 PCDH7O60245 1069 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 NIPSNAP2O75323 286 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 IL7RP16871 459 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 MERTKQ12866 999 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 DAG1Q14118 895 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 KCNJ11Q14654 390 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 ADGRF1Q5T601 910 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 TPGS2Q68CL5 300 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 CCDC36Q8IYA8 594 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 ING5Q8WYH8 240 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 TWNKQ96RR1 684 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 SEZ6LQ9BYH1 1024 aa15.75■□□□□ 0.11
COL2A1-202ENST00000380518 DNAAF2Q9NVR5 837 aaKnown RBP15.75■□□□□ 0.11
COL2A1-202ENST00000380518 TAS2R7Q9NYW3 318 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms