RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 OR52A5Q9H2C5 316 aa22.38■■□□□ 1.17
U2AF1-202ENST00000380276 MVB12BQ9H7P6 319 aa22.38■■□□□ 1.17
U2AF1-202ENST00000380276 ZDHHC3Q9NYG2 299 aa22.38■■□□□ 1.17
U2AF1-202ENST00000380276 ICE1Q9Y2F5 2266 aa22.38■■□□□ 1.17
U2AF1-202ENST00000380276 SHANK1Q9Y566 2161 aa22.38■■□□□ 1.17
U2AF1-202ENST00000380276 NBPF19A0A087WUL8 3843 aa22.37■■□□□ 1.17
U2AF1-202ENST00000380276 ADRA1AP35348 466 aa22.37■■□□□ 1.17
U2AF1-202ENST00000380276 CDKN1CP49918 316 aaPredicted RBP22.37■■□□□ 1.17
U2AF1-202ENST00000380276 ZNF140P52738 457 aaPredicted RBP22.37■■□□□ 1.17
U2AF1-202ENST00000380276 EIF3EP60228 445 aaKnown RBP22.37■■□□□ 1.17
U2AF1-202ENST00000380276 OTUD4Q01804 1114 aaKnown RBP22.37■■□□□ 1.17
U2AF1-202ENST00000380276 SPARCL1Q14515 664 aa22.37■■□□□ 1.17
U2AF1-202ENST00000380276 NR6A1Q15406 480 aa22.37■■□□□ 1.17
U2AF1-202ENST00000380276 DEFB110Q30KQ9 67 aa22.37■■□□□ 1.17
U2AF1-202ENST00000380276 DARS2Q6PI48 645 aaKnown RBP22.37■■□□□ 1.17
U2AF1-202ENST00000380276 MICALCLQ6ZW33 695 aa22.37■■□□□ 1.17
U2AF1-202ENST00000380276 CNGA4Q8IV77 575 aa22.37■■□□□ 1.17
U2AF1-202ENST00000380276 C19orf60Q96EN9 201 aa22.37■■□□□ 1.17
U2AF1-202ENST00000380276 SMAD5Q99717 465 aaKnown RBP22.37■■□□□ 1.17
U2AF1-202ENST00000380276 DPH2Q9BQC3 489 aaPredicted RBP22.37■■□□□ 1.17
U2AF1-202ENST00000380276 PITPNM3Q9BZ71 974 aa22.37■■□□□ 1.17
U2AF1-202ENST00000380276 TFB2MQ9H5Q4 396 aaKnown RBP22.37■■□□□ 1.17
U2AF1-202ENST00000380276 TFR2Q9UP52 801 aa22.37■■□□□ 1.17
U2AF1-202ENST00000380276 PTRH2Q9Y3E5 179 aaKnown RBP22.37■■□□□ 1.17
U2AF1-202ENST00000380276 AKR1B15C9JRZ8 316 aaPredicted RBP22.36■■□□□ 1.17
U2AF1-202ENST00000380276 PEX12O00623 359 aa22.36■■□□□ 1.17
U2AF1-202ENST00000380276 DDAH2O95865 285 aa22.36■■□□□ 1.17
U2AF1-202ENST00000380276 FOLR3P41439 243 aa22.36■■□□□ 1.17
U2AF1-202ENST00000380276 VWA5B1Q5TIE3 1220 aa22.36■■□□□ 1.17
U2AF1-202ENST00000380276 MRGPREQ86SM8 312 aa22.36■■□□□ 1.17
U2AF1-202ENST00000380276 SERPINA9Q86WD7 417 aa22.36■■□□□ 1.17
U2AF1-202ENST00000380276 IQCKQ8N0W5 287 aa22.36■■□□□ 1.17
U2AF1-202ENST00000380276 C19orf47Q8N9M1 422 aaKnown RBP22.36■■□□□ 1.17
U2AF1-202ENST00000380276 CLEC1AQ8NC01 280 aa22.36■■□□□ 1.17
U2AF1-202ENST00000380276 CCDC110Q8TBZ0 833 aa22.36■■□□□ 1.17
U2AF1-202ENST00000380276 ACTL9Q8TC94 416 aa22.36■■□□□ 1.17
U2AF1-202ENST00000380276 TFGQ92734 400 aaPredicted RBP22.36■■□□□ 1.17
U2AF1-202ENST00000380276 DNAJC1Q96KC8 554 aaKnown RBP22.36■■□□□ 1.17
U2AF1-202ENST00000380276 FER1L6-AS2Q96M78 137 aa22.36■■□□□ 1.17
U2AF1-202ENST00000380276 C17orf62Q9BQA9 187 aa22.36■■□□□ 1.17
U2AF1-202ENST00000380276 DHRS4Q9BTZ2 278 aa22.36■■□□□ 1.17
U2AF1-202ENST00000380276 NDOR1Q9UHB4 597 aa22.36■■□□□ 1.17
U2AF1-202ENST00000380276 AGAP14A8MT82 685 aa22.35■■□□□ 1.17
U2AF1-202ENST00000380276 OR2B3O76000 313 aa22.35■■□□□ 1.17
U2AF1-202ENST00000380276 MSL3P1P0C860 447 aa22.35■■□□□ 1.17
U2AF1-202ENST00000380276 PRSS56P0CW18 603 aa22.35■■□□□ 1.17
U2AF1-202ENST00000380276 CBSLP0DN79 551 aa22.35■■□□□ 1.17
U2AF1-202ENST00000380276 RBP3P10745 1247 aa22.35■■□□□ 1.17
U2AF1-202ENST00000380276 SPTBP11277 2137 aa22.35■■□□□ 1.17
U2AF1-202ENST00000380276 ACRV1P26436 265 aa22.35■■□□□ 1.17
U2AF1-202ENST00000380276 CBSP35520 551 aa22.35■■□□□ 1.17
U2AF1-202ENST00000380276 CD151P48509 253 aa22.35■■□□□ 1.17
U2AF1-202ENST00000380276 HADHBP55084 474 aaKnown RBP22.35■■□□□ 1.17
U2AF1-202ENST00000380276 SLC9A5Q14940 896 aa22.35■■□□□ 1.17
U2AF1-202ENST00000380276 BRD3Q15059 726 aa22.35■■□□□ 1.17
U2AF1-202ENST00000380276 LYPLAL1Q5VWZ2 237 aa22.35■■□□□ 1.17
U2AF1-202ENST00000380276 SPESP1Q6UW49 350 aa22.35■■□□□ 1.17
U2AF1-202ENST00000380276 ADGRF3Q8IZF5 1079 aa22.35■■□□□ 1.17
U2AF1-202ENST00000380276 CISD2Q8N5K1 135 aaKnown RBP22.35■■□□□ 1.17
U2AF1-202ENST00000380276 ILKAPQ9H0C8 392 aaPredicted RBP22.35■■□□□ 1.17
U2AF1-202ENST00000380276 IFT80Q9P2H3 777 aaPredicted RBP22.35■■□□□ 1.17
U2AF1-202ENST00000380276 TDRKHQ9Y2W6 561 aaKnown RBP22.35■■□□□ 1.17
U2AF1-202ENST00000380276 ESPL1Q14674 2120 aa22.34■■□□□ 1.17
U2AF1-202ENST00000380276 ALPPP05187 535 aa22.34■■□□□ 1.17
U2AF1-202ENST00000380276 BOP1Q14137 746 aaKnown RBP22.34■■□□□ 1.17
U2AF1-202ENST00000380276 GPR33Q49SQ1 333 aa22.34■■□□□ 1.17
U2AF1-202ENST00000380276 C11orf63Q6NUN7 778 aa22.34■■□□□ 1.17
U2AF1-202ENST00000380276 CLDN19Q8N6F1 224 aa22.34■■□□□ 1.17
U2AF1-202ENST00000380276 OR5AR1Q8NGP9 310 aa22.34■■□□□ 1.17
U2AF1-202ENST00000380276 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.34■■□□□ 1.17
U2AF1-202ENST00000380276 SNRNP40Q96DI7 357 aaKnown RBP22.34■■□□□ 1.17
U2AF1-202ENST00000380276 IP6K3Q96PC2 410 aa22.34■■□□□ 1.17
U2AF1-202ENST00000380276 SPRTNQ9H040 489 aaPredicted RBP22.34■■□□□ 1.17
U2AF1-202ENST00000380276 FAM60AQ9NP50 221 aa22.34■■□□□ 1.17
U2AF1-202ENST00000380276 TXLNGQ9NUQ3 528 aa22.34■■□□□ 1.17
U2AF1-202ENST00000380276 ASF1BQ9NVP2 202 aa22.34■■□□□ 1.17
U2AF1-202ENST00000380276 SMARCAL1Q9NZC9 954 aa22.34■■□□□ 1.17
U2AF1-202ENST00000380276 C5AR2Q9P296 337 aa22.34■■□□□ 1.17
U2AF1-202ENST00000380276 ICKQ9UPZ9 632 aa22.34■■□□□ 1.17
U2AF1-202ENST00000380276 ASF1AQ9Y294 204 aa22.34■■□□□ 1.17
U2AF1-202ENST00000380276 PCSK5Q92824 1860 aa22.34■■□□□ 1.17
U2AF1-202ENST00000380276 UGT2B7P16662 529 aa22.33■■□□□ 1.17
U2AF1-202ENST00000380276 COL8A1P27658 744 aa22.33■■□□□ 1.17
U2AF1-202ENST00000380276 RPA4Q13156 261 aa22.33■■□□□ 1.17
U2AF1-202ENST00000380276 ELOAQ14241 798 aaKnown RBP22.33■■□□□ 1.17
U2AF1-202ENST00000380276 SSPNQ14714 243 aa22.33■■□□□ 1.17
U2AF1-202ENST00000380276 PLEKHN1Q494U1 663 aaPredicted RBP22.33■■□□□ 1.17
U2AF1-202ENST00000380276 TCTN2Q96GX1 697 aa22.33■■□□□ 1.17
U2AF1-202ENST00000380276 SPATA13Q96N96 652 aa22.33■■□□□ 1.17
U2AF1-202ENST00000380276 PPP1R2P1Q96PQ5 205 aa22.33■■□□□ 1.17
U2AF1-202ENST00000380276 DHCR7Q9UBM7 475 aaKnown RBP22.33■■□□□ 1.17
U2AF1-202ENST00000380276 CDYLQ9Y232 598 aa22.33■■□□□ 1.17
U2AF1-202ENST00000380276 B3GNT3Q9Y2A9 372 aa22.33■■□□□ 1.17
U2AF1-202ENST00000380276 AP1M2Q9Y6Q5 423 aa22.33■■□□□ 1.17
U2AF1-202ENST00000380276 SPTAN1Q13813 2472 aaKnown RBP22.33■■□□□ 1.16
U2AF1-202ENST00000380276 CCDC78A2IDD5 438 aa22.32■■□□□ 1.16
U2AF1-202ENST00000380276 TPH1P17752 444 aa22.32■■□□□ 1.16
U2AF1-202ENST00000380276 SHMT2P34897 504 aa22.32■■□□□ 1.16
U2AF1-202ENST00000380276 COPS2P61201 443 aa22.32■■□□□ 1.16
U2AF1-202ENST00000380276 SYTL3Q4VX76 610 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms