RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 METTL6Q8TCB7 284 aa16.95■□□□□ 0.3
THUMPD2-201ENST00000378727 DNASE1L2Q92874 299 aa16.95■□□□□ 0.3
THUMPD2-201ENST00000378727 CLPTM1LQ96KA5 538 aa16.95■□□□□ 0.3
THUMPD2-201ENST00000378727 LINC00615Q96LM1 132 aaPredicted RBP16.95■□□□□ 0.3
THUMPD2-201ENST00000378727 NTMT1Q9BV86 223 aa16.95■□□□□ 0.3
THUMPD2-201ENST00000378727 LGR4Q9BXB1 951 aa16.95■□□□□ 0.3
THUMPD2-201ENST00000378727 SLC32A1Q9H598 525 aa16.95■□□□□ 0.3
THUMPD2-201ENST00000378727 DENND2DQ9H6A0 471 aaPredicted RBP16.95■□□□□ 0.3
THUMPD2-201ENST00000378727 HGFP14210 728 aa16.95■□□□□ 0.3
THUMPD2-201ENST00000378727 EPB42P16452 691 aa16.95■□□□□ 0.3
THUMPD2-201ENST00000378727 HNMTP50135 292 aa16.95■□□□□ 0.3
THUMPD2-201ENST00000378727 ATP4BP51164 291 aa16.95■□□□□ 0.3
THUMPD2-201ENST00000378727 GTF2H3Q13889 308 aa16.95■□□□□ 0.3
THUMPD2-201ENST00000378727 TTC23LQ6PF05 361 aa16.95■□□□□ 0.3
THUMPD2-201ENST00000378727 CRTC3Q6UUV7 619 aa16.95■□□□□ 0.3
THUMPD2-201ENST00000378727 GK5Q6ZS86 529 aa16.95■□□□□ 0.3
THUMPD2-201ENST00000378727 C11orf96Q7Z7L8 435 aa16.95■□□□□ 0.3
THUMPD2-201ENST00000378727 CFAP206Q8IYR0 622 aa16.95■□□□□ 0.3
THUMPD2-201ENST00000378727 GANCQ8TET4 914 aa16.95■□□□□ 0.3
THUMPD2-201ENST00000378727 THTPAQ9BU02 230 aa16.95■□□□□ 0.3
THUMPD2-201ENST00000378727 GPR34Q9UPC5 381 aa16.95■□□□□ 0.3
THUMPD2-201ENST00000378727 PSMD12O00232 456 aaPredicted RBP16.94■□□□□ 0.3
THUMPD2-201ENST00000378727 LIN7AO14910 233 aaPredicted RBP16.94■□□□□ 0.3
THUMPD2-201ENST00000378727 PLRG1O43660 514 aaKnown RBP16.94■□□□□ 0.3
THUMPD2-201ENST00000378727 NARSO43776 548 aaKnown RBP16.94■□□□□ 0.3
THUMPD2-201ENST00000378727 VPS4BO75351 444 aa16.94■□□□□ 0.3
THUMPD2-201ENST00000378727 DNTTP04053 509 aa16.94■□□□□ 0.3
THUMPD2-201ENST00000378727 LBPP18428 481 aa16.94■□□□□ 0.3
THUMPD2-201ENST00000378727 HNRNPH1P31943 449 aaKnown RBP16.94■□□□□ 0.3
THUMPD2-201ENST00000378727 FASTKQ14296 549 aaKnown RBP16.94■□□□□ 0.3
THUMPD2-201ENST00000378727 PTCHD3Q3KNS1 767 aa16.94■□□□□ 0.3
THUMPD2-201ENST00000378727 TTC31Q49AM3 519 aaPredicted RBP16.94■□□□□ 0.3
THUMPD2-201ENST00000378727 CCSMST1Q4G0I0 132 aa16.94■□□□□ 0.3
THUMPD2-201ENST00000378727 OGFOD2Q6N063 350 aa16.94■□□□□ 0.3
THUMPD2-201ENST00000378727 Q6ZSR9 355 aa16.94■□□□□ 0.3
THUMPD2-201ENST00000378727 KLK6Q92876 244 aa16.94■□□□□ 0.3
THUMPD2-201ENST00000378727 PYCR2Q96C36 320 aa16.94■□□□□ 0.3
THUMPD2-201ENST00000378727 ZNF514Q96K75 400 aaPredicted RBP16.94■□□□□ 0.3
THUMPD2-201ENST00000378727 UBE2ZQ9H832 354 aaPredicted RBP16.94■□□□□ 0.3
THUMPD2-201ENST00000378727 FBRSQ9HAH7 460 aa16.94■□□□□ 0.3
THUMPD2-201ENST00000378727 RNF11Q9Y3C5 154 aa16.94■□□□□ 0.3
THUMPD2-201ENST00000378727 A0A088AWK7 358 aa16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 LOC730098B7Z3J9 87 aa16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 SOX1O00570 391 aaPredicted RBP16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 AIM2O14862 343 aa16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 PEX11AO75192 247 aa16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 POP7O75817 140 aaKnown RBP16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 PAK4O96013 591 aaPredicted RBP16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 GPX3P22352 226 aa16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 BDKRB1P46663 353 aa16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 RAP1GDS1P52306 607 aa16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 IRF4Q15306 451 aa16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 CCDC85BQ15834 202 aaPredicted RBP16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 NEK5Q6P3R8 708 aa16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 DOK6Q6PKX4 331 aa16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 LRRC70Q7Z2Q7 622 aa16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 TP53I13Q8NBR0 393 aaPredicted RBP16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 OR9I1Q8NGQ6 314 aa16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 OR14C36Q8NHC7 312 aa16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 FBXL8Q96CD0 374 aa16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 RCN3Q96D15 328 aa16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 C1QTNF2Q9BXJ5 285 aa16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 OSBPL6Q9BZF3 934 aa16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 MRGBPQ9NV56 204 aa16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 BAIAP2L1Q9UHR4 511 aa16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 PRKAB1Q9Y478 270 aa16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 C17orf113A0A1B0GUU1 675 aa16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 PRR23AA6NEV1 266 aa16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 H3BM21 787 aa16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 CHUKO15111 745 aa16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 WDR47O94967 919 aa16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 EBLN1P0CF75 366 aa16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 PIK3CGP48736 1102 aa16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 ADPRHP54922 357 aa16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 MRPS21P82921 87 aaKnown RBP16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 INPP5AQ14642 412 aa16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 PLA2G4EQ3MJ16 856 aa16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 TMEM259Q4ZIN3 620 aa16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 AGKQ53H12 422 aa16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 PAOXQ6QHF9 649 aa16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 IL27RAQ6UWB1 636 aa16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 TRMT11Q7Z4G4 463 aaKnown RBP16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 ULK2Q8IYT8 1036 aa16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 HBEGFQ99075 208 aa16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 GAS2L1Q99501 681 aaPredicted RBP16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 CCT7Q99832 543 aa16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 TEX101Q9BY14 249 aa16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 ATG10Q9H0Y0 220 aa16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 CCDC167Q9P0B6 97 aa16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 TRPS1Q9UHF7 1281 aa16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 COLQQ9Y215 455 aaPredicted RBP16.93■□□□□ 0.3
THUMPD2-201ENST00000378727 PABPN1LA6NDY0 278 aaKnown RBP16.92■□□□□ 0.3
THUMPD2-201ENST00000378727 EZRP15311 586 aaKnown RBP16.92■□□□□ 0.3
THUMPD2-201ENST00000378727 MAP4P27816 1152 aaKnown RBP16.92■□□□□ 0.3
THUMPD2-201ENST00000378727 NUDT2P50583 147 aa16.92■□□□□ 0.3
THUMPD2-201ENST00000378727 RPS21P63220 83 aaKnown RBP16.92■□□□□ 0.3
THUMPD2-201ENST00000378727 NFE2L1Q14494 772 aa16.92■□□□□ 0.3
THUMPD2-201ENST00000378727 ABRAXAS2Q15018 415 aa16.92■□□□□ 0.3
THUMPD2-201ENST00000378727 FAM83HQ6ZRV2 1179 aaPredicted RBP16.92■□□□□ 0.3
THUMPD2-201ENST00000378727 SCUBE1Q8IWY4 988 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms