RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 RFC2P35250 354 aa16.51■□□□□ 0.23
VARS-215ENST00000375663 CSNK2BP67870 215 aa16.51■□□□□ 0.23
VARS-215ENST00000375663 ATXN7L2Q5T6C5 722 aaPredicted RBP16.51■□□□□ 0.23
VARS-215ENST00000375663 OR2T5Q6IEZ7 315 aa16.51■□□□□ 0.23
VARS-215ENST00000375663 MTSS1LQ765P7 747 aa16.51■□□□□ 0.23
VARS-215ENST00000375663 TMPRSS11BQ86T26 416 aa16.51■□□□□ 0.23
VARS-215ENST00000375663 OR2T29Q8NH02 315 aa16.51■□□□□ 0.23
VARS-215ENST00000375663 KBTBD7Q8WVZ9 684 aa16.51■□□□□ 0.23
VARS-215ENST00000375663 TEFMQ96QE5 360 aaKnown RBP16.51■□□□□ 0.23
VARS-215ENST00000375663 SLC9A8Q9Y2E8 581 aa16.51■□□□□ 0.23
VARS-215ENST00000375663 DNAJC15Q9Y5T4 150 aa16.51■□□□□ 0.23
VARS-215ENST00000375663 MARF1Q9Y4F3 1742 aaKnown RBP16.51■□□□□ 0.23
VARS-215ENST00000375663 PER2O15055 1255 aa16.51■□□□□ 0.23
VARS-215ENST00000375663 PQBP1O60828 265 aaKnown RBP16.51■□□□□ 0.23
VARS-215ENST00000375663 RPLP0P05388 317 aaKnown RBP16.51■□□□□ 0.23
VARS-215ENST00000375663 TFAP2AP05549 437 aa16.51■□□□□ 0.23
VARS-215ENST00000375663 CD68P34810 354 aaPredicted RBP16.51■□□□□ 0.23
VARS-215ENST00000375663 SRP54P61011 504 aaKnown RBP16.51■□□□□ 0.23
VARS-215ENST00000375663 PTSQ03393 145 aa16.51■□□□□ 0.23
VARS-215ENST00000375663 SRSF11Q05519 484 aaKnown RBP16.51■□□□□ 0.23
VARS-215ENST00000375663 BTG3Q14201 252 aaPredicted RBP16.51■□□□□ 0.23
VARS-215ENST00000375663 PLEKHG6Q3KR16 790 aa16.51■□□□□ 0.23
VARS-215ENST00000375663 HACD2Q6Y1H2 254 aa16.51■□□□□ 0.23
VARS-215ENST00000375663 GPRIN1Q7Z2K8 1008 aa16.51■□□□□ 0.23
VARS-215ENST00000375663 YME1L1Q96TA2 773 aa16.51■□□□□ 0.23
VARS-215ENST00000375663 C16orf70Q9BSU1 422 aa16.51■□□□□ 0.23
VARS-215ENST00000375663 MRPL17Q9NRX2 175 aaKnown RBP16.51■□□□□ 0.23
VARS-215ENST00000375663 POLR2EP19388 210 aaKnown RBP16.51■□□□□ 0.23
VARS-215ENST00000375663 ADAM17P78536 824 aa16.51■□□□□ 0.23
VARS-215ENST00000375663 GTPBP3Q969Y2 492 aaKnown RBP16.51■□□□□ 0.23
VARS-215ENST00000375663 FNDC11Q9BVV2 318 aa16.51■□□□□ 0.23
VARS-215ENST00000375663 MTMR10Q9NXD2 777 aa16.51■□□□□ 0.23
VARS-215ENST00000375663 MRPS7Q9Y2R9 242 aaKnown RBP16.51■□□□□ 0.23
VARS-215ENST00000375663 LRP5O75197 1615 aa16.51■□□□□ 0.23
VARS-215ENST00000375663 H0YAE9 185 aa16.51■□□□□ 0.23
VARS-215ENST00000375663 CREG1O75629 220 aa16.51■□□□□ 0.23
VARS-215ENST00000375663 SERPINB7O75635 380 aa16.51■□□□□ 0.23
VARS-215ENST00000375663 BMP2P12643 396 aa16.51■□□□□ 0.23
VARS-215ENST00000375663 GDF5P43026 501 aa16.51■□□□□ 0.23
VARS-215ENST00000375663 TMBIM6P55061 237 aa16.51■□□□□ 0.23
VARS-215ENST00000375663 AP1S1P61966 158 aa16.51■□□□□ 0.23
VARS-215ENST00000375663 EMX2Q04743 252 aa16.51■□□□□ 0.23
VARS-215ENST00000375663 TIGD6Q17RP2 521 aa16.51■□□□□ 0.23
VARS-215ENST00000375663 MZT2AQ6P582 158 aa16.51■□□□□ 0.23
VARS-215ENST00000375663 FBXL19Q6PCT2 694 aa16.51■□□□□ 0.23
VARS-215ENST00000375663 MINDY2Q8NBR6 621 aa16.51■□□□□ 0.23
VARS-215ENST00000375663 ZNF599Q96NL3 588 aa16.51■□□□□ 0.23
VARS-215ENST00000375663 SLC38A2Q96QD8 506 aa16.51■□□□□ 0.23
VARS-215ENST00000375663 MARCH4Q9P2E8 410 aaPredicted RBP16.51■□□□□ 0.23
VARS-215ENST00000375663 NME4O00746 187 aa16.5■□□□□ 0.23
VARS-215ENST00000375663 AREL1O15033 823 aa16.5■□□□□ 0.23
VARS-215ENST00000375663 DUSP11O75319 330 aaKnown RBP16.5■□□□□ 0.23
VARS-215ENST00000375663 C7P10643 843 aa16.5■□□□□ 0.23
VARS-215ENST00000375663 CD1DP15813 335 aa16.5■□□□□ 0.23
VARS-215ENST00000375663 HLCSP50747 726 aa16.5■□□□□ 0.23
VARS-215ENST00000375663 NFKB2Q00653 900 aa16.5■□□□□ 0.23
VARS-215ENST00000375663 MADCAM1Q13477 382 aa16.5■□□□□ 0.23
VARS-215ENST00000375663 IFNLR1Q8IU57 520 aaPredicted RBP16.5■□□□□ 0.23
VARS-215ENST00000375663 CMTR2Q8IYT2 770 aaKnown RBP16.5■□□□□ 0.23
VARS-215ENST00000375663 ANKLE1Q8NAG6 615 aa16.5■□□□□ 0.23
VARS-215ENST00000375663 IPCEF1Q8WWN9 437 aaPredicted RBP16.5■□□□□ 0.23
VARS-215ENST00000375663 AP3S1Q92572 193 aa16.5■□□□□ 0.23
VARS-215ENST00000375663 PYCR2Q96C36 320 aa16.5■□□□□ 0.23
VARS-215ENST00000375663 FADS2P1A8MWK0 482 aa16.5■□□□□ 0.23
VARS-215ENST00000375663 CLIC1O00299 241 aa16.5■□□□□ 0.23
VARS-215ENST00000375663 STX16O14662 325 aa16.5■□□□□ 0.23
VARS-215ENST00000375663 S1PR4O95977 384 aa16.5■□□□□ 0.23
VARS-215ENST00000375663 NPPAP01160 153 aa16.5■□□□□ 0.23
VARS-215ENST00000375663 COPZ1P61923 177 aa16.5■□□□□ 0.23
VARS-215ENST00000375663 GCNT6Q5T4J0 391 aa16.5■□□□□ 0.23
VARS-215ENST00000375663 NIPAL1Q6NVV3 410 aa16.5■□□□□ 0.23
VARS-215ENST00000375663 TMPRSS11AQ6ZMR5 421 aa16.5■□□□□ 0.23
VARS-215ENST00000375663 MTERF1Q99551 399 aaKnown RBP16.5■□□□□ 0.23
VARS-215ENST00000375663 NSUN3Q9H649 340 aaKnown RBP16.5■□□□□ 0.23
VARS-215ENST00000375663 AASDHPPTQ9NRN7 309 aa16.5■□□□□ 0.23
VARS-215ENST00000375663 PTGFRNQ9P2B2 879 aa16.5■□□□□ 0.23
VARS-215ENST00000375663 ENTPD4Q9Y227 616 aa16.5■□□□□ 0.23
VARS-215ENST00000375663 MAP4K5Q9Y4K4 846 aa16.5■□□□□ 0.23
VARS-215ENST00000375663 ST14Q9Y5Y6 855 aa16.5■□□□□ 0.23
VARS-215ENST00000375663 KRT87PA6NCN2 255 aa16.5■□□□□ 0.23
VARS-215ENST00000375663 MAFKO60675 156 aa16.5■□□□□ 0.23
VARS-215ENST00000375663 DIRAS1O95057 198 aa16.5■□□□□ 0.23
VARS-215ENST00000375663 TNNI3P19429 210 aa16.5■□□□□ 0.23
VARS-215ENST00000375663 BCAP31P51572 246 aa16.5■□□□□ 0.23
VARS-215ENST00000375663 CLDN19Q8N6F1 224 aa16.5■□□□□ 0.23
VARS-215ENST00000375663 VANGL1Q8TAA9 524 aaPredicted RBP16.5■□□□□ 0.23
VARS-215ENST00000375663 IMP4Q96G21 291 aaKnown RBP16.5■□□□□ 0.23
VARS-215ENST00000375663 TNKS2Q9H2K2 1166 aa16.5■□□□□ 0.23
VARS-215ENST00000375663 INTS7Q9NVH2 962 aaKnown RBP16.5■□□□□ 0.23
VARS-215ENST00000375663 PHF24Q9UPV7 400 aa16.5■□□□□ 0.23
VARS-215ENST00000375663 MYH14Q7Z406 1995 aaKnown RBP16.5■□□□□ 0.23
VARS-215ENST00000375663 MAGEB3O15480 346 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 IFNW1P05000 195 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 NTSP30990 170 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 DNAJA1P31689 397 aaKnown RBP16.49■□□□□ 0.23
VARS-215ENST00000375663 MANFP55145 182 aaKnown RBP16.49■□□□□ 0.23
VARS-215ENST00000375663 TGM3Q08188 693 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 LAPTM4AQ15012 233 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 ZSWIM7Q19AV6 140 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 C6orf141Q5SZD1 244 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms