RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 PRAMEF2O60811 474 aa16.82■□□□□ 0.28
H2AFX-201ENST00000375167 KCNJ13O60928 360 aa16.82■□□□□ 0.28
H2AFX-201ENST00000375167 MTX2O75431 263 aa16.82■□□□□ 0.28
H2AFX-201ENST00000375167 FAM228BP0C875 321 aa16.82■□□□□ 0.28
H2AFX-201ENST00000375167 POLR2CP19387 275 aaPredicted RBP16.82■□□□□ 0.28
H2AFX-201ENST00000375167 HLA-DPA1P20036 260 aa16.82■□□□□ 0.28
H2AFX-201ENST00000375167 CA4P22748 312 aa16.82■□□□□ 0.28
H2AFX-201ENST00000375167 DNASE1P24855 282 aa16.82■□□□□ 0.28
H2AFX-201ENST00000375167 PDPK2PQ6A1A2 396 aa16.82■□□□□ 0.28
H2AFX-201ENST00000375167 Q6ZPB1 254 aaPredicted RBP16.82■□□□□ 0.28
H2AFX-201ENST00000375167 TMEM151BQ8IW70 566 aa16.82■□□□□ 0.28
H2AFX-201ENST00000375167 DNAAF3Q8N9W5 541 aa16.82■□□□□ 0.28
H2AFX-201ENST00000375167 LPCAT1Q8NF37 534 aa16.82■□□□□ 0.28
H2AFX-201ENST00000375167 MRFAP1L1Q96HT8 127 aa16.82■□□□□ 0.28
H2AFX-201ENST00000375167 MRM3Q9HC36 420 aaKnown RBP16.82■□□□□ 0.28
H2AFX-201ENST00000375167 EDARQ9UNE0 448 aa16.82■□□□□ 0.28
H2AFX-201ENST00000375167 CHKBQ9Y259 395 aa16.82■□□□□ 0.28
H2AFX-201ENST00000375167 ZNF835Q9Y2P0 537 aa16.82■□□□□ 0.28
H2AFX-201ENST00000375167 HCFC1P51610 2035 aa16.81■□□□□ 0.28
H2AFX-201ENST00000375167 AKR1B15C9JRZ8 316 aaPredicted RBP16.81■□□□□ 0.28
H2AFX-201ENST00000375167 OR2B3O76000 313 aa16.81■□□□□ 0.28
H2AFX-201ENST00000375167 INHBBP09529 407 aa16.81■□□□□ 0.28
H2AFX-201ENST00000375167 ST6GAL1P15907 406 aa16.81■□□□□ 0.28
H2AFX-201ENST00000375167 ITKQ08881 620 aa16.81■□□□□ 0.28
H2AFX-201ENST00000375167 MYBPHQ13203 477 aa16.81■□□□□ 0.28
H2AFX-201ENST00000375167 GTF2H3Q13889 308 aa16.81■□□□□ 0.28
H2AFX-201ENST00000375167 ALKBH5Q6P6C2 394 aaKnown RBP16.81■□□□□ 0.28
H2AFX-201ENST00000375167 C11orf96Q7Z7L8 435 aa16.81■□□□□ 0.28
H2AFX-201ENST00000375167 SPPL2CQ8IUH8 684 aa16.81■□□□□ 0.28
H2AFX-201ENST00000375167 ZNF653Q96CK0 615 aa16.81■□□□□ 0.28
H2AFX-201ENST00000375167 CNPY3Q9BT09 278 aa16.81■□□□□ 0.28
H2AFX-201ENST00000375167 NUP85Q9BW27 656 aa16.81■□□□□ 0.28
H2AFX-201ENST00000375167 NT5MQ9NPB1 228 aa16.81■□□□□ 0.28
H2AFX-201ENST00000375167 DNAJB12Q9NXW2 375 aaKnown RBP16.81■□□□□ 0.28
H2AFX-201ENST00000375167 PLA2G3Q9NZ20 509 aa16.81■□□□□ 0.28
H2AFX-201ENST00000375167 SLC24A2Q9UI40 661 aa16.81■□□□□ 0.28
H2AFX-201ENST00000375167 HS3ST3B1Q9Y662 390 aa16.81■□□□□ 0.28
H2AFX-201ENST00000375167 SCINQ9Y6U3 715 aa16.81■□□□□ 0.28
H2AFX-201ENST00000375167 SLCO2B1O94956 709 aa16.8■□□□□ 0.28
H2AFX-201ENST00000375167 RPL26P61254 145 aaKnown RBP16.8■□□□□ 0.28
H2AFX-201ENST00000375167 DMPKQ09013 629 aa16.8■□□□□ 0.28
H2AFX-201ENST00000375167 KIRREL2Q6UWL6 708 aa16.8■□□□□ 0.28
H2AFX-201ENST00000375167 AMZ2Q86W34 360 aa16.8■□□□□ 0.28
H2AFX-201ENST00000375167 EID3Q8N140 333 aa16.8■□□□□ 0.28
H2AFX-201ENST00000375167 ATPAF2Q8N5M1 289 aa16.8■□□□□ 0.28
H2AFX-201ENST00000375167 TRAM1L1Q8N609 369 aa16.8■□□□□ 0.28
H2AFX-201ENST00000375167 SUN3Q8TAQ9 357 aa16.8■□□□□ 0.28
H2AFX-201ENST00000375167 TDRD1Q9BXT4 1180 aaKnown RBP16.8■□□□□ 0.28
H2AFX-201ENST00000375167 KIR3DX1Q9H7L2 352 aa16.8■□□□□ 0.28
H2AFX-201ENST00000375167 SLC24A3Q9HC58 644 aa16.8■□□□□ 0.28
H2AFX-201ENST00000375167 MRPL47Q9HD33 250 aaKnown RBP16.8■□□□□ 0.28
H2AFX-201ENST00000375167 DHCR7Q9UBM7 475 aaKnown RBP16.8■□□□□ 0.28
H2AFX-201ENST00000375167 RPL26L1Q9UNX3 145 aaKnown RBP16.8■□□□□ 0.28
H2AFX-201ENST00000375167 CFAP20Q9Y6A4 193 aaKnown RBP16.8■□□□□ 0.28
H2AFX-201ENST00000375167 TMEM191CA6NGB0 347 aa16.79■□□□□ 0.28
H2AFX-201ENST00000375167 FAM171A2A8MVW0 826 aa16.79■□□□□ 0.28
H2AFX-201ENST00000375167 USP1O94782 785 aa16.79■□□□□ 0.28
H2AFX-201ENST00000375167 MLYCDO95822 493 aa16.79■□□□□ 0.28
H2AFX-201ENST00000375167 UQCRHP07919 91 aa16.79■□□□□ 0.28
H2AFX-201ENST00000375167 MYBL2P10244 700 aa16.79■□□□□ 0.28
H2AFX-201ENST00000375167 CDH6P55285 790 aa16.79■□□□□ 0.28
H2AFX-201ENST00000375167 DCDC1P59894 354 aa16.79■□□□□ 0.28
H2AFX-201ENST00000375167 SLC18A3Q16572 532 aa16.79■□□□□ 0.28
H2AFX-201ENST00000375167 RBBP7Q16576 425 aa16.79■□□□□ 0.28
H2AFX-201ENST00000375167 CA9Q16790 459 aa16.79■□□□□ 0.28
H2AFX-201ENST00000375167 ASTE1Q2TB18 679 aaPredicted RBP16.79■□□□□ 0.28
H2AFX-201ENST00000375167 PPP6R3Q5H9R7 873 aaPredicted RBP16.79■□□□□ 0.28
H2AFX-201ENST00000375167 CCDC122Q5T0U0 273 aa16.79■□□□□ 0.28
H2AFX-201ENST00000375167 CDHR3Q6ZTQ4 885 aa16.79■□□□□ 0.28
H2AFX-201ENST00000375167 CCDC110Q8TBZ0 833 aa16.79■□□□□ 0.28
H2AFX-201ENST00000375167 THAP3Q8WTV1 239 aaPredicted RBP16.79■□□□□ 0.28
H2AFX-201ENST00000375167 HAS2Q92819 552 aa16.79■□□□□ 0.28
H2AFX-201ENST00000375167 POLR1EQ9GZS1 481 aaKnown RBP16.79■□□□□ 0.28
H2AFX-201ENST00000375167 NPDC1Q9NQX5 325 aaPredicted RBP16.79■□□□□ 0.28
H2AFX-201ENST00000375167 MRPS2Q9Y399 296 aaKnown RBP16.79■□□□□ 0.28
H2AFX-201ENST00000375167 ZSCAN9O15535 394 aaPredicted RBP16.78■□□□□ 0.28
H2AFX-201ENST00000375167 MAFKO60675 156 aa16.78■□□□□ 0.28
H2AFX-201ENST00000375167 DGKQP52824 942 aa16.78■□□□□ 0.28
H2AFX-201ENST00000375167 OGDHQ02218 1023 aa16.78■□□□□ 0.28
H2AFX-201ENST00000375167 KHDC1Q4VXA5 237 aaKnown RBP16.78■□□□□ 0.28
H2AFX-201ENST00000375167 DMRTC2Q8IXT2 367 aaPredicted RBP16.78■□□□□ 0.28
H2AFX-201ENST00000375167 FKBP10Q96AY3 582 aa16.78■□□□□ 0.28
H2AFX-201ENST00000375167 KCTD15Q96SI1 283 aaPredicted RBP16.78■□□□□ 0.28
H2AFX-201ENST00000375167 CHP1Q99653 195 aa16.78■□□□□ 0.28
H2AFX-201ENST00000375167 PITPNM3Q9BZ71 974 aa16.78■□□□□ 0.28
H2AFX-201ENST00000375167 KLHL25Q9H0H3 589 aa16.78■□□□□ 0.28
H2AFX-201ENST00000375167 DEF6Q9H4E7 631 aa16.78■□□□□ 0.28
H2AFX-201ENST00000375167 RAD18Q9NS91 495 aa16.78■□□□□ 0.28
H2AFX-201ENST00000375167 MYO1AQ9UBC5 1043 aa16.78■□□□□ 0.28
H2AFX-201ENST00000375167 PPT2Q9UMR5 302 aa16.78■□□□□ 0.28
H2AFX-201ENST00000375167 NENFQ9UMX5 172 aa16.78■□□□□ 0.28
H2AFX-201ENST00000375167 FBN1P35555 2871 aaKnown RBP16.78■□□□□ 0.28
H2AFX-201ENST00000375167 E9PLN8 166 aa16.77■□□□□ 0.28
H2AFX-201ENST00000375167 AKR1B10O60218 316 aa16.77■□□□□ 0.28
H2AFX-201ENST00000375167 PSMA2P25787 234 aa16.77■□□□□ 0.28
H2AFX-201ENST00000375167 PMP22Q01453 160 aa16.77■□□□□ 0.28
H2AFX-201ENST00000375167 CACNG1Q06432 222 aa16.77■□□□□ 0.28
H2AFX-201ENST00000375167 TAB3Q8N5C8 712 aaPredicted RBP16.77■□□□□ 0.28
H2AFX-201ENST00000375167 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.77■□□□□ 0.28
H2AFX-201ENST00000375167 TC2NQ8N9U0 490 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms