RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 CTSCP53634 463 aa17.6■□□□□ 0.41
HLA-DQB1-201ENST00000374943 EMX2Q04743 252 aa17.6■□□□□ 0.41
HLA-DQB1-201ENST00000374943 ADAM15Q13444 863 aa17.6■□□□□ 0.41
HLA-DQB1-201ENST00000374943 RCAN2Q14206 197 aa17.6■□□□□ 0.41
HLA-DQB1-201ENST00000374943 GGTA1PQ4G0N0 100 aa17.6■□□□□ 0.41
HLA-DQB1-201ENST00000374943 ZNF658BQ4V348 819 aaPredicted RBP17.6■□□□□ 0.41
HLA-DQB1-201ENST00000374943 SCIMPQ6UWF3 145 aa17.6■□□□□ 0.41
HLA-DQB1-201ENST00000374943 KBTBD6Q86V97 674 aa17.6■□□□□ 0.41
HLA-DQB1-201ENST00000374943 BEND7Q8N7W2 519 aaPredicted RBP17.6■□□□□ 0.41
HLA-DQB1-201ENST00000374943 MCOLN3Q8TDD5 553 aa17.6■□□□□ 0.41
HLA-DQB1-201ENST00000374943 SKA2Q8WVK7 121 aaPredicted RBP17.6■□□□□ 0.41
HLA-DQB1-201ENST00000374943 KXD1Q9BQD3 176 aa17.6■□□□□ 0.41
HLA-DQB1-201ENST00000374943 SPAG4Q9NPE6 437 aa17.6■□□□□ 0.41
HLA-DQB1-201ENST00000374943 SUCOQ9UBS9 1254 aaKnown RBP17.6■□□□□ 0.41
HLA-DQB1-201ENST00000374943 CROTQ9UKG9 612 aa17.6■□□□□ 0.41
HLA-DQB1-201ENST00000374943 LRRC42Q9Y546 428 aa17.6■□□□□ 0.41
HLA-DQB1-201ENST00000374943 ARNTLO00327 626 aa17.59■□□□□ 0.41
HLA-DQB1-201ENST00000374943 SYNCRIPO60506 623 aaKnown RBP17.59■□□□□ 0.41
HLA-DQB1-201ENST00000374943 PSIP1O75475 530 aaKnown RBP17.59■□□□□ 0.41
HLA-DQB1-201ENST00000374943 APODP05090 189 aa17.59■□□□□ 0.41
HLA-DQB1-201ENST00000374943 EPHX1P07099 455 aa17.59■□□□□ 0.41
HLA-DQB1-201ENST00000374943 XRCC1P18887 633 aaPredicted RBP17.59■□□□□ 0.41
HLA-DQB1-201ENST00000374943 EPORP19235 508 aa17.59■□□□□ 0.41
HLA-DQB1-201ENST00000374943 CAPN3P20807 821 aa17.59■□□□□ 0.41
HLA-DQB1-201ENST00000374943 ABRAXAS2Q15018 415 aa17.59■□□□□ 0.41
HLA-DQB1-201ENST00000374943 ITPRIPL2Q3MIP1 535 aa17.59■□□□□ 0.41
HLA-DQB1-201ENST00000374943 SYTL3Q4VX76 610 aa17.59■□□□□ 0.41
HLA-DQB1-201ENST00000374943 CMPK2Q5EBM0 449 aa17.59■□□□□ 0.41
HLA-DQB1-201ENST00000374943 FAM46CQ5VWP2 391 aa17.59■□□□□ 0.41
HLA-DQB1-201ENST00000374943 EGFLAMQ63HQ2 1017 aa17.59■□□□□ 0.41
HLA-DQB1-201ENST00000374943 CES5AQ6NT32 575 aa17.59■□□□□ 0.41
HLA-DQB1-201ENST00000374943 PRMT9Q6P2P2 845 aa17.59■□□□□ 0.41
HLA-DQB1-201ENST00000374943 NUDT18Q6ZVK8 323 aa17.59■□□□□ 0.41
HLA-DQB1-201ENST00000374943 TRIM46Q7Z4K8 759 aa17.59■□□□□ 0.41
HLA-DQB1-201ENST00000374943 RETREG3Q86VR2 466 aa17.59■□□□□ 0.41
HLA-DQB1-201ENST00000374943 MMAAQ8IVH4 418 aaKnown RBP17.59■□□□□ 0.41
HLA-DQB1-201ENST00000374943 NRG4Q8WWG1 115 aa17.59■□□□□ 0.41
HLA-DQB1-201ENST00000374943 FBXL8Q96CD0 374 aa17.59■□□□□ 0.41
HLA-DQB1-201ENST00000374943 PPP3R2Q96LZ3 170 aa17.59■□□□□ 0.41
HLA-DQB1-201ENST00000374943 TACO1Q9BSH4 297 aaKnown RBP17.59■□□□□ 0.41
HLA-DQB1-201ENST00000374943 S1PR5Q9H228 398 aa17.59■□□□□ 0.41
HLA-DQB1-201ENST00000374943 COQ6Q9Y2Z9 468 aa17.59■□□□□ 0.41
HLA-DQB1-201ENST00000374943 TRPM6Q9BX84 2022 aa17.59■□□□□ 0.41
HLA-DQB1-201ENST00000374943 TMEM202A6NGA9 273 aa17.58■□□□□ 0.41
HLA-DQB1-201ENST00000374943 LOC730098B7Z3J9 87 aa17.58■□□□□ 0.41
HLA-DQB1-201ENST00000374943 E7ENX8 843 aa17.58■□□□□ 0.41
HLA-DQB1-201ENST00000374943 SLC28A1O00337 649 aa17.58■□□□□ 0.41
HLA-DQB1-201ENST00000374943 DLL1O00548 723 aa17.58■□□□□ 0.41
HLA-DQB1-201ENST00000374943 ANGPT2O15123 496 aa17.58■□□□□ 0.41
HLA-DQB1-201ENST00000374943 CLDN9O95484 217 aa17.58■□□□□ 0.41
HLA-DQB1-201ENST00000374943 P2RY2P41231 377 aa17.58■□□□□ 0.41
HLA-DQB1-201ENST00000374943 ZFP36L2P47974 494 aaKnown RBP17.58■□□□□ 0.41
HLA-DQB1-201ENST00000374943 SESN3P58005 492 aa17.58■□□□□ 0.41
HLA-DQB1-201ENST00000374943 FOXM1Q08050 763 aa17.58■□□□□ 0.41
HLA-DQB1-201ENST00000374943 ZXDCQ2QGD7 858 aaPredicted RBP17.58■□□□□ 0.41
HLA-DQB1-201ENST00000374943 KLHDC8AQ8IYD2 350 aa17.58■□□□□ 0.41
HLA-DQB1-201ENST00000374943 SLC22A15Q8IZD6 547 aa17.58■□□□□ 0.41
HLA-DQB1-201ENST00000374943 FNDC5Q8NAU1 212 aa17.58■□□□□ 0.41
HLA-DQB1-201ENST00000374943 SLC26A7Q8TE54 656 aa17.58■□□□□ 0.41
HLA-DQB1-201ENST00000374943 USP7Q93009 1102 aa17.58■□□□□ 0.41
HLA-DQB1-201ENST00000374943 TMEM159Q96B96 161 aa17.58■□□□□ 0.41
HLA-DQB1-201ENST00000374943 P2RY13Q9BPV8 354 aa17.58■□□□□ 0.41
HLA-DQB1-201ENST00000374943 HOPXQ9BPY8 73 aaPredicted RBP17.58■□□□□ 0.41
HLA-DQB1-201ENST00000374943 GPATCH1Q9BRR8 931 aaKnown RBP17.58■□□□□ 0.41
HLA-DQB1-201ENST00000374943 CLEC1BQ9P126 229 aa17.58■□□□□ 0.41
HLA-DQB1-201ENST00000374943 TMEM181Q9P2C4 612 aa17.58■□□□□ 0.41
HLA-DQB1-201ENST00000374943 REV3LO60673 3130 aa17.58■□□□□ 0.4
HLA-DQB1-201ENST00000374943 A0A1W2PP18 115 aa17.58■□□□□ 0.4
HLA-DQB1-201ENST00000374943 PLK4O00444 970 aa17.58■□□□□ 0.4
HLA-DQB1-201ENST00000374943 MANBAO00462 879 aa17.58■□□□□ 0.4
HLA-DQB1-201ENST00000374943 NPC1O15118 1278 aa17.58■□□□□ 0.4
HLA-DQB1-201ENST00000374943 INPP4BO15327 924 aa17.58■□□□□ 0.4
HLA-DQB1-201ENST00000374943 RGS14O43566 566 aa17.58■□□□□ 0.4
HLA-DQB1-201ENST00000374943 MMP20O60882 483 aa17.58■□□□□ 0.4
HLA-DQB1-201ENST00000374943 LILRB5O75023 590 aa17.58■□□□□ 0.4
HLA-DQB1-201ENST00000374943 SLC22A3O75751 556 aa17.58■□□□□ 0.4
HLA-DQB1-201ENST00000374943 BCAS2O75934 225 aaPredicted RBP17.58■□□□□ 0.4
HLA-DQB1-201ENST00000374943 GDI1P31150 447 aa17.58■□□□□ 0.4
HLA-DQB1-201ENST00000374943 NME5P56597 212 aa17.58■□□□□ 0.4
HLA-DQB1-201ENST00000374943 FLOT2Q14254 428 aa17.58■□□□□ 0.4
HLA-DQB1-201ENST00000374943 NR6A1Q15406 480 aa17.58■□□□□ 0.4
HLA-DQB1-201ENST00000374943 TMEM220Q6QAJ8 160 aa17.58■□□□□ 0.4
HLA-DQB1-201ENST00000374943 PARM1Q6UWI2 310 aa17.58■□□□□ 0.4
HLA-DQB1-201ENST00000374943 FGF14Q92915 247 aa17.58■□□□□ 0.4
HLA-DQB1-201ENST00000374943 ASB9Q96DX5 294 aa17.58■□□□□ 0.4
HLA-DQB1-201ENST00000374943 SPDL1Q96EA4 605 aa17.58■□□□□ 0.4
HLA-DQB1-201ENST00000374943 MAGEB10Q96LZ2 347 aaPredicted RBP17.58■□□□□ 0.4
HLA-DQB1-201ENST00000374943 MAP10Q9P2G4 905 aa17.58■□□□□ 0.4
HLA-DQB1-201ENST00000374943 PACSIN3Q9UKS6 424 aa17.58■□□□□ 0.4
HLA-DQB1-201ENST00000374943 RNF11Q9Y3C5 154 aa17.58■□□□□ 0.4
HLA-DQB1-201ENST00000374943 FADS3Q9Y5Q0 445 aa17.58■□□□□ 0.4
HLA-DQB1-201ENST00000374943 C5orf42Q9H799 3197 aa17.57■□□□□ 0.4
HLA-DQB1-201ENST00000374943 DYTNA2CJ06 578 aa17.57■□□□□ 0.4
HLA-DQB1-201ENST00000374943 FAM234BA2RU67 622 aa17.57■□□□□ 0.4
HLA-DQB1-201ENST00000374943 GRXCR2A6NFK2 248 aa17.57■□□□□ 0.4
HLA-DQB1-201ENST00000374943 ACOT8O14734 319 aa17.57■□□□□ 0.4
HLA-DQB1-201ENST00000374943 LZTS3O60299 673 aaPredicted RBP17.57■□□□□ 0.4
HLA-DQB1-201ENST00000374943 GPR1P46091 355 aa17.57■□□□□ 0.4
HLA-DQB1-201ENST00000374943 CCR3P51677 355 aa17.57■□□□□ 0.4
HLA-DQB1-201ENST00000374943 KCNK10P57789 538 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms