RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 CRTC1Q6UUV9 634 aa16.71■□□□□ 0.27
RXRB-201ENST00000374680 TBC1D21Q8IYX1 336 aa16.71■□□□□ 0.27
RXRB-201ENST00000374680 FAM162AQ96A26 154 aa16.71■□□□□ 0.27
RXRB-201ENST00000374680 ZBTB18Q99592 522 aa16.71■□□□□ 0.27
RXRB-201ENST00000374680 C1QTNF3Q9BXJ4 246 aa16.71■□□□□ 0.27
RXRB-201ENST00000374680 EIF3LQ9Y262 564 aaKnown RBP16.71■□□□□ 0.27
RXRB-201ENST00000374680 THSD7BQ9C0I4 1608 aa16.71■□□□□ 0.27
RXRB-201ENST00000374680 KCNH1O95259 989 aa16.7■□□□□ 0.26
RXRB-201ENST00000374680 ALBP02768 609 aa16.7■□□□□ 0.26
RXRB-201ENST00000374680 SOD2P04179 222 aa16.7■□□□□ 0.26
RXRB-201ENST00000374680 POLR2IP36954 125 aaKnown RBP16.7■□□□□ 0.26
RXRB-201ENST00000374680 GALK1P51570 392 aa16.7■□□□□ 0.26
RXRB-201ENST00000374680 EEFSECP57772 596 aaKnown RBP16.7■□□□□ 0.26
RXRB-201ENST00000374680 PCBP2Q15366 365 aaKnown RBP eCLIP16.7■□□□□ 0.262e-7■■■□□ 15.2
RXRB-201ENST00000374680 CHST14Q8NCH0 376 aa16.7■□□□□ 0.26
RXRB-201ENST00000374680 PNPT1Q8TCS8 783 aaKnown RBP16.7■□□□□ 0.26
RXRB-201ENST00000374680 SLC22A17Q8WUG5 538 aa16.7■□□□□ 0.26
RXRB-201ENST00000374680 SELENOMQ8WWX9 145 aa16.7■□□□□ 0.26
RXRB-201ENST00000374680 CORO1BQ9BR76 489 aa16.7■□□□□ 0.26
RXRB-201ENST00000374680 INPP5KQ9BT40 448 aa16.7■□□□□ 0.26
RXRB-201ENST00000374680 ING2Q9H160 280 aa16.7■□□□□ 0.26
RXRB-201ENST00000374680 EPB41L1Q9H4G0 881 aa16.7■□□□□ 0.26
RXRB-201ENST00000374680 NTN4Q9HB63 628 aa16.7■□□□□ 0.26
RXRB-201ENST00000374680 LRTM1Q9HBL6 345 aa16.7■□□□□ 0.26
RXRB-201ENST00000374680 INVSQ9Y283 1065 aa16.7■□□□□ 0.26
RXRB-201ENST00000374680 PCDHB1Q9Y5F3 818 aa16.7■□□□□ 0.26
RXRB-201ENST00000374680 BACE2Q9Y5Z0 518 aa16.7■□□□□ 0.26
RXRB-201ENST00000374680 H7C0S8 307 aa16.7■□□□□ 0.26
RXRB-201ENST00000374680 STK16O75716 305 aa16.7■□□□□ 0.26
RXRB-201ENST00000374680 PRKD3O94806 890 aa16.7■□□□□ 0.26
RXRB-201ENST00000374680 ACRP10323 421 aa16.7■□□□□ 0.26
RXRB-201ENST00000374680 IL7RP16871 459 aa16.7■□□□□ 0.26
RXRB-201ENST00000374680 CCR7P32248 378 aa16.7■□□□□ 0.26
RXRB-201ENST00000374680 GNPDA1P46926 289 aa16.7■□□□□ 0.26
RXRB-201ENST00000374680 ESRRGP62508 458 aa16.7■□□□□ 0.26
RXRB-201ENST00000374680 INTS11Q5TA45 600 aaKnown RBP16.7■□□□□ 0.26
RXRB-201ENST00000374680 TMEM26Q6ZUK4 368 aa16.7■□□□□ 0.26
RXRB-201ENST00000374680 HCFC1R1Q9NWW0 138 aa16.7■□□□□ 0.26
RXRB-201ENST00000374680 SLC25A37Q9NYZ2 338 aa16.7■□□□□ 0.26
RXRB-201ENST00000374680 HSFX1Q9UBD0 423 aa16.7■□□□□ 0.26
RXRB-201ENST00000374680 ATP11BQ9Y2G3 1177 aa16.7■□□□□ 0.26
RXRB-201ENST00000374680 OR2AG2A6NM03 316 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 ANKRD28O15084 1053 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 RGS14O43566 566 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 MAN1A2O60476 641 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 GREM1O60565 184 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 DIRAS1O95057 198 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 PDYNP01213 254 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 PGRP06401 933 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 ANXA6P08133 673 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 CDK4P11802 303 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 ZXDCQ2QGD7 858 aaPredicted RBP16.69■□□□□ 0.26
RXRB-201ENST00000374680 SPESP1Q6UW49 350 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 CERS6Q6ZMG9 384 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 Q6ZVU0 165 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 DCAF4L2Q8NA75 395 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 GTF2H4Q92759 462 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 BDH2Q9BUT1 245 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 RNF208Q9H0X6 261 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 ATP13A3Q9H7F0 1226 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 ZNF821O75541 412 aaPredicted RBP16.69■□□□□ 0.26
RXRB-201ENST00000374680 CST1P01037 141 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 LHCGRP22888 699 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 CAPGP40121 348 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 CASP9P55211 416 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 ADARP55265 1226 aaKnown RBP16.69■□□□□ 0.26
RXRB-201ENST00000374680 PHC1P78364 1004 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 PWP1Q13610 501 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 PLEKHG6Q3KR16 790 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 TRIM60Q495X7 471 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 GPRC6AQ5T6X5 926 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 ANKRD26P1Q6NSI1 321 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 UBE2R2Q712K3 238 aaPredicted RBP16.69■□□□□ 0.26
RXRB-201ENST00000374680 NXPE1Q8N323 547 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 PARP8Q8N3A8 854 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 ABTB1Q969K4 478 aaPredicted RBP16.69■□□□□ 0.26
RXRB-201ENST00000374680 APOLD1Q96LR9 279 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 IL21Q9HBE4 155 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 PARVBQ9HBI1 364 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 SLC22A14Q9Y267 594 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 A0A087WXM4 84 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 K7EPI3 171 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 E2F6O75461 281 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 WDR47O94967 919 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 MYF6P23409 242 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 HTR1EP28566 365 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 SHMT2P34897 504 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 SPAM1P38567 509 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 AP1S1P61966 158 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 FOXM1Q08050 763 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 SPIDRQ14159 915 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 DPY19L3Q6ZPD9 716 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 KCTD8Q6ZWB6 473 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 MRPS31Q92665 395 aaKnown RBP16.69■□□□□ 0.26
RXRB-201ENST00000374680 ZNF558Q96NG5 402 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 HEBP1Q9NRV9 189 aa16.69■□□□□ 0.26
RXRB-201ENST00000374680 H0YJX3 145 aa16.68■□□□□ 0.26
RXRB-201ENST00000374680 MANBAO00462 879 aa16.68■□□□□ 0.26
RXRB-201ENST00000374680 BCKDHAP12694 445 aa16.68■□□□□ 0.26
RXRB-201ENST00000374680 CYP4F3Q08477 520 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms