RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 DCBLD1Q8N8Z6 715 aa15.32■□□□□ 0.04
NIPAL3-204ENST00000374399 SCARF2Q96GP6 870 aaPredicted RBP15.32■□□□□ 0.04
NIPAL3-204ENST00000374399 C3orf30Q96M34 536 aa15.32■□□□□ 0.04
NIPAL3-204ENST00000374399 CDK15Q96Q40 435 aa15.32■□□□□ 0.04
NIPAL3-204ENST00000374399 CCDC106Q9BWC9 280 aa15.32■□□□□ 0.04
NIPAL3-204ENST00000374399 C1QTNF7Q9BXJ2 289 aa15.32■□□□□ 0.04
NIPAL3-204ENST00000374399 C6orf106Q9H6K1 298 aaPredicted RBP15.32■□□□□ 0.04
NIPAL3-204ENST00000374399 NOL11Q9H8H0 719 aaKnown RBP15.32■□□□□ 0.04
NIPAL3-204ENST00000374399 TCF7L2Q9NQB0 619 aa15.32■□□□□ 0.04
NIPAL3-204ENST00000374399 WWOXQ9NZC7 414 aa15.32■□□□□ 0.04
NIPAL3-204ENST00000374399 APOBEC2Q9Y235 224 aaKnown RBP15.32■□□□□ 0.04
NIPAL3-204ENST00000374399 GPR89AB7ZAQ6 455 aa15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 C1orf105O95561 183 aa15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 SEMA4FO95754 770 aa15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 GPR89BP0CG08 455 aa15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 BDKRB1P46663 353 aa15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 SCTRP47872 440 aa15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 METTL2BQ6P1Q9 378 aaKnown RBP15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 AMZ2Q86W34 360 aa15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 TEX9Q8N6V9 391 aa15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 DENND6BQ8NEG7 585 aa15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 SPDYE1Q8NFV5 336 aaPredicted RBP15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 OR56A4Q8NGH8 313 aa15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 CFAP61Q8NHU2 1237 aa15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 FAR2Q96K12 515 aa15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 ZDHHC5Q9C0B5 715 aa15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 DPEP2Q9H4A9 486 aa15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 ZNF385DQ9H6B1 395 aa15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 MRPL40Q9NQ50 206 aaKnown RBP15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 ARL8BQ9NVJ2 186 aa15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 FBXL21Q9UKT6 434 aa15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 CYP8B1Q9UNU6 501 aa15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 MRPS17Q9Y2R5 130 aaKnown RBP15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 PTGDR2Q9Y5Y4 395 aa15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 DNMT3AQ9Y6K1 912 aaPredicted RBP15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 LRRC72A6NJI9 287 aa15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 E9PBE3 544 aa15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 CCNT2O60583 730 aaKnown RBP15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 KLHL41O60662 606 aa15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 KIAA0754O94854 1291 aa15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 OR4F21O95013 312 aa15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 CBX6O95503 412 aa15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 MLYCDO95822 493 aa15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 HOXC4P09017 264 aaPredicted RBP15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 CD1EP15812 388 aa15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 CYP2A7P20853 494 aa15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 AP1S2P56377 157 aa15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 NCALDP61601 193 aa15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 METRNLQ641Q3 311 aa15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 GCNT7Q6ZNI0 430 aa15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 PGBD3Q8N328 593 aa15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 TMEM145Q8NBT3 493 aa15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 MCOLN3Q8TDD5 553 aa15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 FBXL8Q96CD0 374 aa15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 TOE1Q96GM8 510 aaKnown RBP15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 CCDC28BQ9BUN5 200 aa15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 WSB2Q9NYS7 404 aaPredicted RBP15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 CIDEBQ9UHD4 219 aa15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 PNMA8BQ9ULN7 279 aaPredicted RBP15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 PLEKHM1Q9Y4G2 1056 aa15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 TIMM22Q9Y584 194 aa15.31■□□□□ 0.04
NIPAL3-204ENST00000374399 LRP4O75096 1905 aa15.3■□□□□ 0.04
NIPAL3-204ENST00000374399 TRPC5OSA6NMA1 111 aa15.3■□□□□ 0.04
NIPAL3-204ENST00000374399 K7EPI3 171 aa15.3■□□□□ 0.04
NIPAL3-204ENST00000374399 CCDC22O60826 627 aa15.3■□□□□ 0.04
NIPAL3-204ENST00000374399 STK16O75716 305 aa15.3■□□□□ 0.04
NIPAL3-204ENST00000374399 PFN3P60673 137 aa15.3■□□□□ 0.04
NIPAL3-204ENST00000374399 DMPKQ09013 629 aa15.3■□□□□ 0.04
NIPAL3-204ENST00000374399 RBBP7Q16576 425 aa15.3■□□□□ 0.04
NIPAL3-204ENST00000374399 PTCHD3Q3KNS1 767 aa15.3■□□□□ 0.04
NIPAL3-204ENST00000374399 PYCR3Q53H96 274 aa15.3■□□□□ 0.04
NIPAL3-204ENST00000374399 TCHHL1Q5QJ38 904 aaPredicted RBP15.3■□□□□ 0.04
NIPAL3-204ENST00000374399 TMEM198Q66K66 360 aa15.3■□□□□ 0.04
NIPAL3-204ENST00000374399 GPRIN3Q6ZVF9 776 aa15.3■□□□□ 0.04
NIPAL3-204ENST00000374399 FBXO15Q8NCQ5 510 aaPredicted RBP15.3■□□□□ 0.04
NIPAL3-204ENST00000374399 TSTD1Q8NFU3 115 aa15.3■□□□□ 0.04
NIPAL3-204ENST00000374399 TWIST2Q8WVJ9 160 aa15.3■□□□□ 0.04
NIPAL3-204ENST00000374399 CLDN23Q96B33 292 aa15.3■□□□□ 0.04
NIPAL3-204ENST00000374399 PTCD3Q96EY7 689 aaKnown RBP15.3■□□□□ 0.04
NIPAL3-204ENST00000374399 SHDQ96IW2 340 aa15.3■□□□□ 0.04
NIPAL3-204ENST00000374399 PKP4Q99569 1192 aa15.3■□□□□ 0.04
NIPAL3-204ENST00000374399 TRIM54Q9BYV2 358 aa15.3■□□□□ 0.04
NIPAL3-204ENST00000374399 IPPKQ9H8X2 491 aa15.3■□□□□ 0.04
NIPAL3-204ENST00000374399 TBC1D17Q9HA65 648 aa15.3■□□□□ 0.04
NIPAL3-204ENST00000374399 FGF22Q9HCT0 170 aa15.3■□□□□ 0.04
NIPAL3-204ENST00000374399 CD320Q9NPF0 282 aa15.3■□□□□ 0.04
NIPAL3-204ENST00000374399 ZNHIT2Q9UHR6 403 aa15.3■□□□□ 0.04
NIPAL3-204ENST00000374399 PRR5-ARHGAP8B1AHC4 643 aa15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 PIP5K1BO14986 540 aa15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 KMOO15229 486 aa15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 PRAMEF4O60810 478 aa15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 UNC5CO95185 931 aa15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 HIST1H2AGP0C0S8 130 aaPredicted RBP15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 HIST1H2ADP20671 130 aa15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 HNRNPA2B1P22626 353 aaKnown RBP15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 HNMTP50135 292 aa15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 PKNOX1P55347 436 aa15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 KIAA1024LP59773 190 aa15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 PLOD1Q02809 727 aaPredicted RBP15.29■□□□□ 0.04
NIPAL3-204ENST00000374399 RPA4Q13156 261 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms