RNA–Protein interactions for RNA: ENST00000373672.7

COL16A1-203, Transcript of collagen type XVI alpha 1 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL16A1, Length 5,736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-203ENST00000373672 XKR4Q5GH76 650 aa17.73■□□□□ 0.43
COL16A1-203ENST00000373672 ALKBH2Q6NS38 261 aa17.73■□□□□ 0.43
COL16A1-203ENST00000373672 TMEM214Q6NUQ4 689 aaKnown RBP17.73■□□□□ 0.43
COL16A1-203ENST00000373672 PIWIL1Q96J94 861 aaKnown RBP17.73■□□□□ 0.43
COL16A1-203ENST00000373672 EBF3Q9H4W6 596 aa17.73■□□□□ 0.43
COL16A1-203ENST00000373672 K7EPI3 171 aa17.73■□□□□ 0.43
COL16A1-203ENST00000373672 UBXN7O94888 489 aa17.73■□□□□ 0.43
COL16A1-203ENST00000373672 ATAT1Q5SQI0 421 aa17.73■□□□□ 0.43
COL16A1-203ENST00000373672 CCDC80Q76M96 950 aa17.73■□□□□ 0.43
COL16A1-203ENST00000373672 DNAJB7Q7Z6W7 309 aaPredicted RBP17.73■□□□□ 0.43
COL16A1-203ENST00000373672 SOWAHBA6NEL2 793 aa17.73■□□□□ 0.43
COL16A1-203ENST00000373672 VNN1O95497 513 aa17.73■□□□□ 0.43
COL16A1-203ENST00000373672 ZBTB48P10074 688 aaPredicted RBP17.73■□□□□ 0.43
COL16A1-203ENST00000373672 GRK6P43250 576 aa17.73■□□□□ 0.43
COL16A1-203ENST00000373672 ERVK-8P63133 956 aa17.73■□□□□ 0.43
COL16A1-203ENST00000373672 MINDY4Q4G0A6 757 aa17.73■□□□□ 0.43
COL16A1-203ENST00000373672 FAM156AQ8NDB6 213 aa17.73■□□□□ 0.43
COL16A1-203ENST00000373672 KAT2AQ92830 837 aa17.73■□□□□ 0.43
COL16A1-203ENST00000373672 TLR6Q9Y2C9 796 aa17.73■□□□□ 0.43
COL16A1-203ENST00000373672 RIMBP3CA6NJZ7 1639 aa17.73■□□□□ 0.43
COL16A1-203ENST00000373672 RIMBP3BA6NNM3 1639 aa17.73■□□□□ 0.43
COL16A1-203ENST00000373672 RIMBP3Q9UFD9 1639 aa17.73■□□□□ 0.43
COL16A1-203ENST00000373672 CPSF4LA6NMK7 179 aaKnown RBP17.73■□□□□ 0.43
COL16A1-203ENST00000373672 YJEFN3A6XGL0 299 aa17.73■□□□□ 0.43
COL16A1-203ENST00000373672 PI15O43692 258 aa17.73■□□□□ 0.43
COL16A1-203ENST00000373672 ALPPP05187 535 aa17.73■□□□□ 0.43
COL16A1-203ENST00000373672 SLC9B1Q4ZJI4 515 aa17.73■□□□□ 0.43
COL16A1-203ENST00000373672 SLC51AQ86UW1 340 aa17.73■□□□□ 0.43
COL16A1-203ENST00000373672 COX18Q8N8Q8 333 aa17.73■□□□□ 0.43
COL16A1-203ENST00000373672 KCNS3Q9BQ31 491 aa17.73■□□□□ 0.43
COL16A1-203ENST00000373672 SRMSQ9H3Y6 488 aa17.73■□□□□ 0.43
COL16A1-203ENST00000373672 IMPDH1P20839 514 aa17.73■□□□□ 0.43
COL16A1-203ENST00000373672 GNALP38405 381 aa17.73■□□□□ 0.43
COL16A1-203ENST00000373672 AVPR1BP47901 424 aa17.73■□□□□ 0.43
COL16A1-203ENST00000373672 IRF9Q00978 393 aa17.73■□□□□ 0.43
COL16A1-203ENST00000373672 MXD1Q05195 221 aa17.73■□□□□ 0.43
COL16A1-203ENST00000373672 RAB2BQ8WUD1 216 aa17.73■□□□□ 0.43
COL16A1-203ENST00000373672 TNFAIP8L1Q8WVP5 186 aa17.73■□□□□ 0.43
COL16A1-203ENST00000373672 NTAN1Q96AB6 310 aa17.73■□□□□ 0.43
COL16A1-203ENST00000373672 MNTQ99583 582 aa17.73■□□□□ 0.43
COL16A1-203ENST00000373672 COPS7AQ9UBW8 275 aa17.73■□□□□ 0.43
COL16A1-203ENST00000373672 NOBOXO60393 691 aa17.72■□□□□ 0.43
COL16A1-203ENST00000373672 VARSP26640 1264 aaKnown RBP17.72■□□□□ 0.43
COL16A1-203ENST00000373672 TRMT10BQ6PF06 316 aaKnown RBP17.72■□□□□ 0.43
COL16A1-203ENST00000373672 SATL1Q86VE3 508 aa17.72■□□□□ 0.43
COL16A1-203ENST00000373672 C10orf82Q8WW14 230 aa17.72■□□□□ 0.43
COL16A1-203ENST00000373672 TOP1MTQ969P6 601 aa17.72■□□□□ 0.43
COL16A1-203ENST00000373672 FAM210AQ96ND0 272 aa17.72■□□□□ 0.43
COL16A1-203ENST00000373672 TBC1D17Q9HA65 648 aa17.72■□□□□ 0.43
COL16A1-203ENST00000373672 TBC1D24Q9ULP9 559 aa17.72■□□□□ 0.43
COL16A1-203ENST00000373672 WRBO00258 174 aa17.72■□□□□ 0.43
COL16A1-203ENST00000373672 PMM2O15305 246 aa17.72■□□□□ 0.43
COL16A1-203ENST00000373672 CPN2P22792 545 aa17.72■□□□□ 0.43
COL16A1-203ENST00000373672 HSD17B2P37059 387 aa17.72■□□□□ 0.43
COL16A1-203ENST00000373672 GALNT7Q86SF2 657 aa17.72■□□□□ 0.43
COL16A1-203ENST00000373672 OR10H4Q8NGA5 316 aa17.72■□□□□ 0.43
COL16A1-203ENST00000373672 FUBP3Q96I24 572 aaKnown RBP eCLIP17.72■□□□□ 0.43
COL16A1-203ENST00000373672 COPS4Q9BT78 406 aa17.72■□□□□ 0.43
COL16A1-203ENST00000373672 RHPN2P1A8MT19 583 aa17.72■□□□□ 0.43
COL16A1-203ENST00000373672 GATBO75879 557 aaKnown RBP17.72■□□□□ 0.43
COL16A1-203ENST00000373672 RYKP34925 604 aa17.72■□□□□ 0.43
COL16A1-203ENST00000373672 TIE1P35590 1138 aa17.72■□□□□ 0.43
COL16A1-203ENST00000373672 CRISP3P54108 245 aa17.72■□□□□ 0.43
COL16A1-203ENST00000373672 PITPNAQ00169 270 aa17.72■□□□□ 0.43
COL16A1-203ENST00000373672 UBAP2Q5T6F2 1119 aaKnown RBP17.72■□□□□ 0.43
COL16A1-203ENST00000373672 GAL3ST4Q96RP7 486 aa17.72■□□□□ 0.43
COL16A1-203ENST00000373672 IFT27Q9BW83 186 aa17.72■□□□□ 0.43
COL16A1-203ENST00000373672 LRRC3Q9BY71 257 aa17.72■□□□□ 0.43
COL16A1-203ENST00000373672 OSBPL7Q9BZF2 842 aa17.72■□□□□ 0.43
COL16A1-203ENST00000373672 FZD8Q9H461 694 aa17.72■□□□□ 0.43
COL16A1-203ENST00000373672 MRPS30Q9NP92 439 aaKnown RBP17.72■□□□□ 0.43
COL16A1-203ENST00000373672 IFT46Q9NQC8 304 aa17.72■□□□□ 0.43
COL16A1-203ENST00000373672 FARSBQ9NSD9 589 aaKnown RBP17.72■□□□□ 0.43
COL16A1-203ENST00000373672 DNAAF2Q9NVR5 837 aaKnown RBP17.72■□□□□ 0.43
COL16A1-203ENST00000373672 PRKAB1Q9Y478 270 aa17.72■□□□□ 0.43
COL16A1-203ENST00000373672 DCLK1O15075 740 aa17.72■□□□□ 0.43
COL16A1-203ENST00000373672 CDH1P12830 882 aa17.72■□□□□ 0.43
COL16A1-203ENST00000373672 NR4A1P22736 598 aa17.72■□□□□ 0.43
COL16A1-203ENST00000373672 CLCN4P51793 760 aa17.72■□□□□ 0.43
COL16A1-203ENST00000373672 PITRM1Q5JRX3 1037 aa17.72■□□□□ 0.43
COL16A1-203ENST00000373672 OR2L5Q8NG80 312 aa17.72■□□□□ 0.43
COL16A1-203ENST00000373672 CLEC4CQ8WTT0 213 aa17.72■□□□□ 0.43
COL16A1-203ENST00000373672 ANXA2P2A6NMY6 339 aa17.71■□□□□ 0.43
COL16A1-203ENST00000373672 ANXA2P07355 339 aaKnown RBP17.71■□□□□ 0.43
COL16A1-203ENST00000373672 AZGP1P25311 298 aaKnown RBP17.71■□□□□ 0.43
COL16A1-203ENST00000373672 ATXN1P54253 815 aaKnown RBP17.71■□□□□ 0.43
COL16A1-203ENST00000373672 REM2Q8IYK8 340 aaPredicted RBP17.71■□□□□ 0.43
COL16A1-203ENST00000373672 DCAKDQ8WVC6 231 aa17.71■□□□□ 0.43
COL16A1-203ENST00000373672 ZNF599Q96NL3 588 aa17.71■□□□□ 0.43
COL16A1-203ENST00000373672 TVP23BQ9NYZ1 205 aa17.71■□□□□ 0.43
COL16A1-203ENST00000373672 PTTG2Q9NZH5 202 aa17.71■□□□□ 0.43
COL16A1-203ENST00000373672 TPST2O60704 377 aa17.71■□□□□ 0.43
COL16A1-203ENST00000373672 LGR5O75473 907 aa17.71■□□□□ 0.43
COL16A1-203ENST00000373672 ZNF432O94892 652 aa17.71■□□□□ 0.43
COL16A1-203ENST00000373672 GSTT2BP0CG30 244 aa17.71■□□□□ 0.43
COL16A1-203ENST00000373672 MYCLP1P12525 358 aaPredicted RBP17.71■□□□□ 0.43
COL16A1-203ENST00000373672 SEC13P55735 322 aa17.71■□□□□ 0.43
COL16A1-203ENST00000373672 FRMD7Q6ZUT3 714 aa17.71■□□□□ 0.43
COL16A1-203ENST00000373672 ZNF572Q7Z3I7 529 aaPredicted RBP17.71■□□□□ 0.43
COL16A1-203ENST00000373672 OXR1Q8N573 874 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms