RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 INVSQ9Y283 1065 aa16.96■□□□□ 0.31
UBE3D-203ENST00000369747 PRSS21Q9Y6M0 314 aa16.96■□□□□ 0.31
UBE3D-203ENST00000369747 ATP6AP2A0A1C7CYW4 349 aa16.96■□□□□ 0.3
UBE3D-203ENST00000369747 ATP6AP2O75787 350 aa16.96■□□□□ 0.3
UBE3D-203ENST00000369747 SEMA4FO95754 770 aa16.96■□□□□ 0.3
UBE3D-203ENST00000369747 CCR3P51677 355 aa16.96■□□□□ 0.3
UBE3D-203ENST00000369747 DMWDQ09019 674 aa16.96■□□□□ 0.3
UBE3D-203ENST00000369747 CCNIQ14094 377 aa16.96■□□□□ 0.3
UBE3D-203ENST00000369747 ZRSR2Q15696 482 aaKnown RBP16.96■□□□□ 0.3
UBE3D-203ENST00000369747 PTRHD1Q6GMV3 140 aaKnown RBP16.96■□□□□ 0.3
UBE3D-203ENST00000369747 KIAA1161Q6NSJ0 714 aa16.96■□□□□ 0.3
UBE3D-203ENST00000369747 MAMSTRQ6ZN01 415 aa16.96■□□□□ 0.3
UBE3D-203ENST00000369747 HORMAD1Q86X24 394 aa16.96■□□□□ 0.3
UBE3D-203ENST00000369747 GPSM1Q86YR5 675 aa16.96■□□□□ 0.3
UBE3D-203ENST00000369747 RAVER1Q8IY67 606 aaKnown RBP16.96■□□□□ 0.3
UBE3D-203ENST00000369747 RBFAQ8N0V3 343 aa16.96■□□□□ 0.3
UBE3D-203ENST00000369747 OR2T34Q8NGX1 318 aa16.96■□□□□ 0.3
UBE3D-203ENST00000369747 LKAAEAR1Q8TD35 194 aa16.96■□□□□ 0.3
UBE3D-203ENST00000369747 TWIST2Q8WVJ9 160 aa16.96■□□□□ 0.3
UBE3D-203ENST00000369747 CCDC124Q96CT7 223 aaKnown RBP16.96■□□□□ 0.3
UBE3D-203ENST00000369747 ZNF570Q96NI8 536 aa16.96■□□□□ 0.3
UBE3D-203ENST00000369747 ZSCAN5AQ9BUG6 496 aa16.96■□□□□ 0.3
UBE3D-203ENST00000369747 SLC17A9Q9BYT1 436 aa16.96■□□□□ 0.3
UBE3D-203ENST00000369747 C6orf106Q9H6K1 298 aaPredicted RBP16.96■□□□□ 0.3
UBE3D-203ENST00000369747 SGK2Q9HBY8 427 aa16.96■□□□□ 0.3
UBE3D-203ENST00000369747 MRGBPQ9NV56 204 aa16.96■□□□□ 0.3
UBE3D-203ENST00000369747 CRLS1Q9UJA2 301 aa16.96■□□□□ 0.3
UBE3D-203ENST00000369747 PCTPQ9UKL6 214 aa16.96■□□□□ 0.3
UBE3D-203ENST00000369747 PRPF19Q9UMS4 504 aaKnown RBP16.96■□□□□ 0.3
UBE3D-203ENST00000369747 LRRC42Q9Y546 428 aa16.96■□□□□ 0.3
UBE3D-203ENST00000369747 PTGDR2Q9Y5Y4 395 aa16.96■□□□□ 0.3
UBE3D-203ENST00000369747 PIP5K1BO14986 540 aa16.95■□□□□ 0.3
UBE3D-203ENST00000369747 GPC4O75487 556 aa16.95■□□□□ 0.3
UBE3D-203ENST00000369747 GTF2A1P52655 376 aaPredicted RBP16.95■□□□□ 0.3
UBE3D-203ENST00000369747 WSCD2Q2TBF2 565 aa16.95■□□□□ 0.3
UBE3D-203ENST00000369747 GPR33Q49SQ1 333 aa16.95■□□□□ 0.3
UBE3D-203ENST00000369747 NXPE1Q8N323 547 aa16.95■□□□□ 0.3
UBE3D-203ENST00000369747 TRAM1L1Q8N609 369 aa16.95■□□□□ 0.3
UBE3D-203ENST00000369747 ANKRD27Q96NW4 1050 aa16.95■□□□□ 0.3
UBE3D-203ENST00000369747 IER2Q9BTL4 223 aa16.95■□□□□ 0.3
UBE3D-203ENST00000369747 TUBB1Q9H4B7 451 aa16.95■□□□□ 0.3
UBE3D-203ENST00000369747 AKTIPQ9H8T0 292 aa16.95■□□□□ 0.3
UBE3D-203ENST00000369747 EFCAB1Q9HAE3 211 aa16.95■□□□□ 0.3
UBE3D-203ENST00000369747 FZD3Q9NPG1 666 aa16.95■□□□□ 0.3
UBE3D-203ENST00000369747 MBNL1Q9NR56 388 aaKnown RBP16.95■□□□□ 0.3
UBE3D-203ENST00000369747 RAD18Q9NS91 495 aa16.95■□□□□ 0.3
UBE3D-203ENST00000369747 WSB2Q9NYS7 404 aaPredicted RBP16.95■□□□□ 0.3
UBE3D-203ENST00000369747 GNPTGQ9UJJ9 305 aa16.95■□□□□ 0.3
UBE3D-203ENST00000369747 TMCO1Q9UM00 188 aa16.95■□□□□ 0.3
UBE3D-203ENST00000369747 WDR87Q6ZQQ6 2873 aa16.95■□□□□ 0.3
UBE3D-203ENST00000369747 GON4LQ3T8J9 2241 aa16.94■□□□□ 0.3
UBE3D-203ENST00000369747 IGHV1OR15-9A0A0B4J2B8 117 aa16.94■□□□□ 0.3
UBE3D-203ENST00000369747 LRRC72A6NJI9 287 aa16.94■□□□□ 0.3
UBE3D-203ENST00000369747 RAD51BO15315 384 aa16.94■□□□□ 0.3
UBE3D-203ENST00000369747 SLC31A1O15431 190 aa16.94■□□□□ 0.3
UBE3D-203ENST00000369747 ZNF217O75362 1048 aa16.94■□□□□ 0.3
UBE3D-203ENST00000369747 RPSAP08865 295 aaKnown RBP16.94■□□□□ 0.3
UBE3D-203ENST00000369747 ALDOCP09972 364 aaKnown RBP16.94■□□□□ 0.3
UBE3D-203ENST00000369747 CD6P30203 668 aa16.94■□□□□ 0.3
UBE3D-203ENST00000369747 VHLP40337 213 aa16.94■□□□□ 0.3
UBE3D-203ENST00000369747 NAA20P61599 178 aa16.94■□□□□ 0.3
UBE3D-203ENST00000369747 DPTQ07507 201 aa16.94■□□□□ 0.3
UBE3D-203ENST00000369747 SGCGQ13326 291 aa16.94■□□□□ 0.3
UBE3D-203ENST00000369747 FASTKQ14296 549 aaKnown RBP16.94■□□□□ 0.3
UBE3D-203ENST00000369747 TGFBIQ15582 683 aa16.94■□□□□ 0.3
UBE3D-203ENST00000369747 MAP7D1Q3KQU3 841 aa16.94■□□□□ 0.3
UBE3D-203ENST00000369747 TCHHL1Q5QJ38 904 aaPredicted RBP16.94■□□□□ 0.3
UBE3D-203ENST00000369747 NEK5Q6P3R8 708 aa16.94■□□□□ 0.3
UBE3D-203ENST00000369747 LRRC74BQ6ZQY2 392 aa16.94■□□□□ 0.3
UBE3D-203ENST00000369747 ZNF765Q7L2R6 523 aa16.94■□□□□ 0.3
UBE3D-203ENST00000369747 PGAM4Q8N0Y7 254 aa16.94■□□□□ 0.3
UBE3D-203ENST00000369747 CLDN19Q8N6F1 224 aa16.94■□□□□ 0.3
UBE3D-203ENST00000369747 TMEM105Q8N8V8 129 aa16.94■□□□□ 0.3
UBE3D-203ENST00000369747 TTC1Q99614 292 aa16.94■□□□□ 0.3
UBE3D-203ENST00000369747 NPAS2Q99743 824 aa16.94■□□□□ 0.3
UBE3D-203ENST00000369747 MYOCQ99972 504 aa16.94■□□□□ 0.3
UBE3D-203ENST00000369747 GPR174Q9BXC1 333 aa16.94■□□□□ 0.3
UBE3D-203ENST00000369747 CD274Q9NZQ7 290 aa16.94■□□□□ 0.3
UBE3D-203ENST00000369747 ASB1Q9Y576 335 aa16.94■□□□□ 0.3
UBE3D-203ENST00000369747 PSMD12O00232 456 aaPredicted RBP16.94■□□□□ 0.3
UBE3D-203ENST00000369747 INPP4BO15327 924 aa16.94■□□□□ 0.3
UBE3D-203ENST00000369747 FKBP6O75344 327 aa16.94■□□□□ 0.3
UBE3D-203ENST00000369747 MTX2O75431 263 aa16.94■□□□□ 0.3
UBE3D-203ENST00000369747 ANPEPP15144 967 aa16.94■□□□□ 0.3
UBE3D-203ENST00000369747 DPP6P42658 865 aa16.94■□□□□ 0.3
UBE3D-203ENST00000369747 AP2B1P63010 937 aa16.94■□□□□ 0.3
UBE3D-203ENST00000369747 AGERQ15109 404 aa16.94■□□□□ 0.3
UBE3D-203ENST00000369747 LYPLAL1Q5VWZ2 237 aa16.94■□□□□ 0.3
UBE3D-203ENST00000369747 RAET1GQ6H3X3 334 aa16.94■□□□□ 0.3
UBE3D-203ENST00000369747 PHYKPLQ8IUZ5 450 aa16.94■□□□□ 0.3
UBE3D-203ENST00000369747 ESAMQ96AP7 390 aa16.94■□□□□ 0.3
UBE3D-203ENST00000369747 NMRK1Q9NWW6 199 aa16.94■□□□□ 0.3
UBE3D-203ENST00000369747 ZNF225Q9UK10 706 aa16.94■□□□□ 0.3
UBE3D-203ENST00000369747 PACSIN3Q9UKS6 424 aa16.94■□□□□ 0.3
UBE3D-203ENST00000369747 CNOT6Q9ULM6 557 aaKnown RBP16.94■□□□□ 0.3
UBE3D-203ENST00000369747 EML5Q05BV3 1969 aa16.93■□□□□ 0.3
UBE3D-203ENST00000369747 C10orf142B7Z368 130 aa16.93■□□□□ 0.3
UBE3D-203ENST00000369747 SNX2O60749 519 aa16.93■□□□□ 0.3
UBE3D-203ENST00000369747 PCCBP05166 539 aa16.93■□□□□ 0.3
UBE3D-203ENST00000369747 ENO3P13929 434 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms