RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 CYP4F3Q08477 520 aa17.11■□□□□ 0.33
CHTOP-203ENST00000368690 KIAA0040Q15053 153 aa17.11■□□□□ 0.33
CHTOP-203ENST00000368690 RBBP7Q16576 425 aa17.11■□□□□ 0.33
CHTOP-203ENST00000368690 CTU1Q7Z7A3 348 aaKnown RBP17.11■□□□□ 0.33
CHTOP-203ENST00000368690 TMEM179BQ7Z7N9 219 aa17.11■□□□□ 0.33
CHTOP-203ENST00000368690 HTRA1Q92743 480 aa17.11■□□□□ 0.33
CHTOP-203ENST00000368690 FAM162AQ96A26 154 aa17.11■□□□□ 0.33
CHTOP-203ENST00000368690 NXF2Q9GZY0 626 aaKnown RBP17.11■□□□□ 0.33
CHTOP-203ENST00000368690 NOL6Q9H6R4 1146 aaKnown RBP17.11■□□□□ 0.33
CHTOP-203ENST00000368690 CATSPERZQ9NTU4 200 aa17.11■□□□□ 0.33
CHTOP-203ENST00000368690 OPTCQ9UBM4 332 aa17.11■□□□□ 0.33
CHTOP-203ENST00000368690 EIF3LQ9Y262 564 aaKnown RBP17.11■□□□□ 0.33
CHTOP-203ENST00000368690 PCDHB14Q9Y5E9 798 aa17.11■□□□□ 0.33
CHTOP-203ENST00000368690 EFCAB9A8MZ26 197 aa17.1■□□□□ 0.33
CHTOP-203ENST00000368690 CCL22O00626 93 aa17.1■□□□□ 0.33
CHTOP-203ENST00000368690 RECQL5O94762 991 aaPredicted RBP17.1■□□□□ 0.33
CHTOP-203ENST00000368690 CST5P28325 142 aaPredicted RBP17.1■□□□□ 0.33
CHTOP-203ENST00000368690 SCNN1GP51170 649 aa17.1■□□□□ 0.33
CHTOP-203ENST00000368690 CRYBB1P53674 252 aaPredicted RBP17.1■□□□□ 0.33
CHTOP-203ENST00000368690 PRKCDQ05655 676 aa17.1■□□□□ 0.33
CHTOP-203ENST00000368690 VAC14Q08AM6 782 aa17.1■□□□□ 0.33
CHTOP-203ENST00000368690 LAPTM5Q13571 262 aa17.1■□□□□ 0.33
CHTOP-203ENST00000368690 UBE2UQ5VVX9 321 aa17.1■□□□□ 0.33
CHTOP-203ENST00000368690 ANKRD34AQ69YU3 496 aa17.1■□□□□ 0.33
CHTOP-203ENST00000368690 CCSAPQ6IQ19 270 aaPredicted RBP17.1■□□□□ 0.33
CHTOP-203ENST00000368690 LRRC8DQ7L1W4 858 aa17.1■□□□□ 0.33
CHTOP-203ENST00000368690 CHPFQ8IZ52 775 aa17.1■□□□□ 0.33
CHTOP-203ENST00000368690 ELMOD1Q8N336 334 aa17.1■□□□□ 0.33
CHTOP-203ENST00000368690 NKAPQ8N5F7 415 aaKnown RBP17.1■□□□□ 0.33
CHTOP-203ENST00000368690 TEX26Q8N6G2 289 aa17.1■□□□□ 0.33
CHTOP-203ENST00000368690 APOL4Q9BPW4 351 aa17.1■□□□□ 0.33
CHTOP-203ENST00000368690 TM9SF3Q9HD45 589 aa17.1■□□□□ 0.33
CHTOP-203ENST00000368690 NT5MQ9NPB1 228 aa17.1■□□□□ 0.33
CHTOP-203ENST00000368690 VAPAQ9P0L0 249 aa17.1■□□□□ 0.33
CHTOP-203ENST00000368690 OR2A25A4D2G3 310 aa17.09■□□□□ 0.33
CHTOP-203ENST00000368690 MAN1A2O60476 641 aa17.09■□□□□ 0.33
CHTOP-203ENST00000368690 SNX4O95219 450 aa17.09■□□□□ 0.33
CHTOP-203ENST00000368690 FKBP9O95302 570 aa17.09■□□□□ 0.33
CHTOP-203ENST00000368690 DLGAP3O95886 979 aa17.09■□□□□ 0.33
CHTOP-203ENST00000368690 FTH1P02794 183 aa17.09■□□□□ 0.33
CHTOP-203ENST00000368690 MT-ND2P03891 347 aa17.09■□□□□ 0.33
CHTOP-203ENST00000368690 FSHRP23945 695 aa17.09■□□□□ 0.33
CHTOP-203ENST00000368690 IGFBP5P24593 272 aa17.09■□□□□ 0.33
CHTOP-203ENST00000368690 THPOP40225 353 aa17.09■□□□□ 0.33
CHTOP-203ENST00000368690 PRMT2P55345 433 aa17.09■□□□□ 0.33
CHTOP-203ENST00000368690 CSNK2BP67870 215 aa17.09■□□□□ 0.33
CHTOP-203ENST00000368690 NKX3-2P78367 333 aa17.09■□□□□ 0.33
CHTOP-203ENST00000368690 TRAF3Q13114 568 aa17.09■□□□□ 0.33
CHTOP-203ENST00000368690 TSNQ15631 228 aaKnown RBP17.09■□□□□ 0.33
CHTOP-203ENST00000368690 TRIP4Q15650 581 aaPredicted RBP17.09■□□□□ 0.33
CHTOP-203ENST00000368690 MARC1Q5VT66 337 aa17.09■□□□□ 0.33
CHTOP-203ENST00000368690 PAQR3Q6TCH7 311 aa17.09■□□□□ 0.33
CHTOP-203ENST00000368690 HEATR4Q86WZ0 1026 aa17.09■□□□□ 0.33
CHTOP-203ENST00000368690 MICU2Q8IYU8 434 aa17.09■□□□□ 0.33
CHTOP-203ENST00000368690 UMODL1-AS1Q8N2C9 162 aa17.09■□□□□ 0.33
CHTOP-203ENST00000368690 PROX1Q92786 737 aa17.09■□□□□ 0.33
CHTOP-203ENST00000368690 SLC38A4Q969I6 547 aa17.09■□□□□ 0.33
CHTOP-203ENST00000368690 TP53INP1Q96A56 240 aa17.09■□□□□ 0.33
CHTOP-203ENST00000368690 SENP8Q96LD8 212 aa17.09■□□□□ 0.33
CHTOP-203ENST00000368690 SIGLEC11Q96RL6 698 aa17.09■□□□□ 0.33
CHTOP-203ENST00000368690 ACOX2Q99424 681 aa17.09■□□□□ 0.33
CHTOP-203ENST00000368690 DCSTAMPQ9H295 470 aa17.09■□□□□ 0.33
CHTOP-203ENST00000368690 A8MU76 341 aa17.09■□□□□ 0.33
CHTOP-203ENST00000368690 DFNA5O60443 496 aa17.09■□□□□ 0.33
CHTOP-203ENST00000368690 RHOBTB1O94844 696 aa17.09■□□□□ 0.33
CHTOP-203ENST00000368690 G6PDP11413 515 aa17.09■□□□□ 0.33
CHTOP-203ENST00000368690 CD36P16671 472 aa17.09■□□□□ 0.33
CHTOP-203ENST00000368690 EFNA1P20827 205 aaPredicted RBP17.09■□□□□ 0.33
CHTOP-203ENST00000368690 FMO3P31513 532 aa17.09■□□□□ 0.33
CHTOP-203ENST00000368690 MRPS6P82932 125 aaKnown RBP17.09■□□□□ 0.33
CHTOP-203ENST00000368690 SEMA3AQ14563 771 aa17.09■□□□□ 0.33
CHTOP-203ENST00000368690 PON2Q15165 354 aa17.09■□□□□ 0.33
CHTOP-203ENST00000368690 SMU1Q2TAY7 513 aa17.09■□□□□ 0.33
CHTOP-203ENST00000368690 SETMARQ53H47 684 aaPredicted RBP17.09■□□□□ 0.33
CHTOP-203ENST00000368690 UBXN11Q5T124 520 aa17.09■□□□□ 0.33
CHTOP-203ENST00000368690 OR4L1Q8NH43 312 aa17.09■□□□□ 0.33
CHTOP-203ENST00000368690 OR10A6Q8NH74 314 aa17.09■□□□□ 0.33
CHTOP-203ENST00000368690 SLC13A3Q8WWT9 602 aa17.09■□□□□ 0.33
CHTOP-203ENST00000368690 SNX18Q96RF0 628 aa17.09■□□□□ 0.33
CHTOP-203ENST00000368690 RNF39Q9H2S5 420 aa17.09■□□□□ 0.33
CHTOP-203ENST00000368690 TRMT13Q9NUP7 481 aaKnown RBP17.09■□□□□ 0.33
CHTOP-203ENST00000368690 KCTD3Q9Y597 815 aa17.09■□□□□ 0.33
CHTOP-203ENST00000368690 FAM220BPB1ANY3 271 aa17.08■□□□□ 0.33
CHTOP-203ENST00000368690 E9PAM4 449 aa17.08■□□□□ 0.33
CHTOP-203ENST00000368690 E2F3O00716 465 aa17.08■□□□□ 0.33
CHTOP-203ENST00000368690 RAD51BO15315 384 aa17.08■□□□□ 0.33
CHTOP-203ENST00000368690 PRKACGP22612 351 aa17.08■□□□□ 0.33
CHTOP-203ENST00000368690 AKT1P31749 480 aa17.08■□□□□ 0.33
CHTOP-203ENST00000368690 NR4A2P43354 598 aa17.08■□□□□ 0.33
CHTOP-203ENST00000368690 MAGEA2P43356 314 aa17.08■□□□□ 0.33
CHTOP-203ENST00000368690 DSC2Q02487 901 aa17.08■□□□□ 0.33
CHTOP-203ENST00000368690 ATG9BQ674R7 924 aa17.08■□□□□ 0.33
CHTOP-203ENST00000368690 SCIMPQ6UWF3 145 aa17.08■□□□□ 0.33
CHTOP-203ENST00000368690 VASH1Q7L8A9 365 aaPredicted RBP17.08■□□□□ 0.33
CHTOP-203ENST00000368690 ABI1Q8IZP0 508 aa17.08■□□□□ 0.33
CHTOP-203ENST00000368690 DNAJB8Q8NHS0 232 aa17.08■□□□□ 0.33
CHTOP-203ENST00000368690 GTF2H4Q92759 462 aa17.08■□□□□ 0.33
CHTOP-203ENST00000368690 PDLIM5Q96HC4 596 aaKnown RBP17.08■□□□□ 0.33
CHTOP-203ENST00000368690 ZBTB18Q99592 522 aa17.08■□□□□ 0.33
CHTOP-203ENST00000368690 NACA2Q9H009 215 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms