RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 ISM1B1AKI9 464 aa16.04■□□□□ 0.16
SCAF1-201ENST00000360565 EFCAB14O75071 495 aa16.04■□□□□ 0.16
SCAF1-201ENST00000360565 ZNF865P0CJ78 1059 aaPredicted RBP16.04■□□□□ 0.16
SCAF1-201ENST00000360565 CDKN2DP55273 166 aa16.04■□□□□ 0.16
SCAF1-201ENST00000360565 SRSF11Q05519 484 aaKnown RBP16.04■□□□□ 0.16
SCAF1-201ENST00000360565 C6orf136Q5SQH8 315 aa16.04■□□□□ 0.16
SCAF1-201ENST00000360565 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.04■□□□□ 0.16
SCAF1-201ENST00000360565 CHSY3Q70JA7 882 aa16.04■□□□□ 0.16
SCAF1-201ENST00000360565 ZNF598Q86UK7 904 aaKnown RBP16.04■□□□□ 0.16
SCAF1-201ENST00000360565 KDM1BQ8NB78 822 aa16.04■□□□□ 0.16
SCAF1-201ENST00000360565 OR10Q1Q8NGQ4 319 aa16.04■□□□□ 0.16
SCAF1-201ENST00000360565 KCNJ9Q92806 393 aa16.04■□□□□ 0.16
SCAF1-201ENST00000360565 ZNF607Q96SK3 696 aa16.04■□□□□ 0.16
SCAF1-201ENST00000360565 HDHD2Q9H0R4 259 aa16.04■□□□□ 0.16
SCAF1-201ENST00000360565 AMBNQ9NP70 447 aa16.04■□□□□ 0.16
SCAF1-201ENST00000360565 ZNF232Q9UNY5 417 aa16.04■□□□□ 0.16
SCAF1-201ENST00000360565 PER2O15055 1255 aa16.04■□□□□ 0.16
SCAF1-201ENST00000360565 KDELR3O43731 214 aa16.04■□□□□ 0.16
SCAF1-201ENST00000360565 RSL1D1O76021 490 aaKnown RBP16.04■□□□□ 0.16
SCAF1-201ENST00000360565 GJB5O95377 273 aa16.04■□□□□ 0.16
SCAF1-201ENST00000360565 EIF2S1P05198 315 aaKnown RBP16.04■□□□□ 0.16
SCAF1-201ENST00000360565 CD1DP15813 335 aa16.04■□□□□ 0.16
SCAF1-201ENST00000360565 AFF1P51825 1210 aaKnown RBP16.04■□□□□ 0.16
SCAF1-201ENST00000360565 CASP9P55211 416 aa16.04■□□□□ 0.16
SCAF1-201ENST00000360565 ZNF789Q5FWF6 425 aa16.04■□□□□ 0.16
SCAF1-201ENST00000360565 OGFOD2Q6N063 350 aa16.04■□□□□ 0.16
SCAF1-201ENST00000360565 BHLHB9Q6PI77 547 aa16.04■□□□□ 0.16
SCAF1-201ENST00000360565 C16orf62Q7Z3J2 963 aa16.04■□□□□ 0.16
SCAF1-201ENST00000360565 GOLGA7Q7Z5G4 137 aa16.04■□□□□ 0.16
SCAF1-201ENST00000360565 PHYKPLQ8IUZ5 450 aa16.04■□□□□ 0.16
SCAF1-201ENST00000360565 ENKURQ8TC29 256 aa16.04■□□□□ 0.16
SCAF1-201ENST00000360565 C1QTNF7Q9BXJ2 289 aa16.04■□□□□ 0.16
SCAF1-201ENST00000360565 TPK1Q9H3S4 243 aa16.04■□□□□ 0.16
SCAF1-201ENST00000360565 KLHL1Q9NR64 748 aa16.04■□□□□ 0.16
SCAF1-201ENST00000360565 GABRQQ9UN88 632 aa16.04■□□□□ 0.16
SCAF1-201ENST00000360565 GSTK1Q9Y2Q3 226 aa16.04■□□□□ 0.16
SCAF1-201ENST00000360565 GPSM3Q9Y4H4 160 aa16.04■□□□□ 0.16
SCAF1-201ENST00000360565 ARVCFO00192 962 aa16.03■□□□□ 0.16
SCAF1-201ENST00000360565 SOCS7O14512 581 aa16.03■□□□□ 0.16
SCAF1-201ENST00000360565 EGFLAMQ63HQ2 1017 aa16.03■□□□□ 0.16
SCAF1-201ENST00000360565 TPGS2Q68CL5 300 aa16.03■□□□□ 0.16
SCAF1-201ENST00000360565 ZMIZ2Q8NF64 920 aa16.03■□□□□ 0.16
SCAF1-201ENST00000360565 OR2AP1Q8NGE2 309 aa16.03■□□□□ 0.16
SCAF1-201ENST00000360565 SORT1Q99523 831 aa16.03■□□□□ 0.16
SCAF1-201ENST00000360565 SPATA5L1Q9BVQ7 753 aa16.03■□□□□ 0.16
SCAF1-201ENST00000360565 CRISPLD1Q9H336 500 aa16.03■□□□□ 0.16
SCAF1-201ENST00000360565 ZDHHC3Q9NYG2 299 aa16.03■□□□□ 0.16
SCAF1-201ENST00000360565 SLC22A14Q9Y267 594 aa16.03■□□□□ 0.16
SCAF1-201ENST00000360565 URB1O60287 2271 aaKnown RBP16.03■□□□□ 0.16
SCAF1-201ENST00000360565 PIPSLA2A3N6 862 aa16.03■□□□□ 0.16
SCAF1-201ENST00000360565 HTRA2O43464 458 aaPredicted RBP16.03■□□□□ 0.16
SCAF1-201ENST00000360565 POU2F1P14859 743 aa16.03■□□□□ 0.16
SCAF1-201ENST00000360565 CDH12P55289 794 aa16.03■□□□□ 0.16
SCAF1-201ENST00000360565 TLR1Q15399 786 aa16.03■□□□□ 0.16
SCAF1-201ENST00000360565 ZBTB6Q15916 424 aa16.03■□□□□ 0.16
SCAF1-201ENST00000360565 UTS2BQ765I0 119 aa16.03■□□□□ 0.16
SCAF1-201ENST00000360565 VN1R5Q7Z5H4 357 aa16.03■□□□□ 0.16
SCAF1-201ENST00000360565 CMTM8Q8IZV2 173 aa16.03■□□□□ 0.16
SCAF1-201ENST00000360565 SLC34A3Q8N130 599 aa16.03■□□□□ 0.16
SCAF1-201ENST00000360565 UBASH3BQ8TF42 649 aa16.03■□□□□ 0.16
SCAF1-201ENST00000360565 CAPNS2Q96L46 248 aa16.03■□□□□ 0.16
SCAF1-201ENST00000360565 NLE1Q9NVX2 485 aaPredicted RBP16.03■□□□□ 0.16
SCAF1-201ENST00000360565 PDE9AO76083 593 aa16.03■□□□□ 0.16
SCAF1-201ENST00000360565 PGRP06401 933 aa16.03■□□□□ 0.16
SCAF1-201ENST00000360565 RPL26P61254 145 aaKnown RBP16.03■□□□□ 0.16
SCAF1-201ENST00000360565 FOXM1Q08050 763 aa16.03■□□□□ 0.16
SCAF1-201ENST00000360565 GCNT6Q5T4J0 391 aa16.03■□□□□ 0.16
SCAF1-201ENST00000360565 ZNF57Q68EA5 555 aaPredicted RBP16.03■□□□□ 0.16
SCAF1-201ENST00000360565 ING5Q8WYH8 240 aa16.03■□□□□ 0.16
SCAF1-201ENST00000360565 SLC32A1Q9H598 525 aa16.03■□□□□ 0.16
SCAF1-201ENST00000360565 SEC14L3Q9UDX4 400 aa16.03■□□□□ 0.16
SCAF1-201ENST00000360565 ADAM30Q9UKF2 790 aa16.03■□□□□ 0.16
SCAF1-201ENST00000360565 EMCNQ9ULC0 261 aa16.03■□□□□ 0.16
SCAF1-201ENST00000360565 TOR1BO14657 336 aa16.03■□□□□ 0.16
SCAF1-201ENST00000360565 ADH1CP00326 375 aa16.03■□□□□ 0.16
SCAF1-201ENST00000360565 ITGB1P05556 798 aa16.03■□□□□ 0.16
SCAF1-201ENST00000360565 GKP32189 559 aa16.03■□□□□ 0.16
SCAF1-201ENST00000360565 CBX2Q14781 532 aaPredicted RBP16.03■□□□□ 0.16
SCAF1-201ENST00000360565 USP39Q53GS9 565 aaKnown RBP16.03■□□□□ 0.16
SCAF1-201ENST00000360565 PDE12Q6L8Q7 609 aaKnown RBP16.03■□□□□ 0.16
SCAF1-201ENST00000360565 GPR153Q6NV75 609 aa16.03■□□□□ 0.16
SCAF1-201ENST00000360565 P2RY8Q86VZ1 359 aa16.03■□□□□ 0.16
SCAF1-201ENST00000360565 KREMEN2Q8NCW0 462 aa16.03■□□□□ 0.16
SCAF1-201ENST00000360565 OR5K1Q8NHB7 308 aa16.03■□□□□ 0.16
SCAF1-201ENST00000360565 SH3RF2Q8TEC5 729 aa16.03■□□□□ 0.16
SCAF1-201ENST00000360565 FBXL20Q96IG2 436 aa16.03■□□□□ 0.16
SCAF1-201ENST00000360565 FERD3LQ96RJ6 166 aa16.03■□□□□ 0.16
SCAF1-201ENST00000360565 AIF1LQ9BQI0 150 aa16.03■□□□□ 0.16
SCAF1-201ENST00000360565 DUSP26Q9BV47 211 aa16.03■□□□□ 0.16
SCAF1-201ENST00000360565 WDR12Q9GZL7 423 aaKnown RBP16.03■□□□□ 0.16
SCAF1-201ENST00000360565 GTF2A1LQ9UNN4 478 aa16.03■□□□□ 0.16
SCAF1-201ENST00000360565 AGRPO00253 132 aa16.02■□□□□ 0.16
SCAF1-201ENST00000360565 STX16O14662 325 aa16.02■□□□□ 0.16
SCAF1-201ENST00000360565 OR4F3Q6IEY1 312 aa16.02■□□□□ 0.16
SCAF1-201ENST00000360565 SLAIN1Q8ND83 568 aa16.02■□□□□ 0.16
SCAF1-201ENST00000360565 FBXO10Q9UK96 956 aa16.02■□□□□ 0.16
SCAF1-201ENST00000360565 BMP10O95393 424 aa16.02■□□□□ 0.15
SCAF1-201ENST00000360565 GJA5P36382 358 aa16.02■□□□□ 0.15
SCAF1-201ENST00000360565 WASP42768 502 aa16.02■□□□□ 0.15
SCAF1-201ENST00000360565 PKDCCQ504Y2 493 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms