RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 EMC10Q5UCC4 262 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 TMEM220Q6QAJ8 160 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 CFAP206Q8IYR0 622 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 DEPDC4Q8N2C3 294 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 AVL9Q8NBF6 648 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 OR2T12Q8NG77 320 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 AGAP11Q8TF27 550 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 PYDC1Q8WXC3 89 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 CENPIQ92674 756 aaPredicted RBP6.91□□□□□ -1.3
RAB5B-201ENST00000360299 AZIN2Q96A70 460 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 TOE1Q96GM8 510 aaKnown RBP6.91□□□□□ -1.3
RAB5B-201ENST00000360299 HIC2Q96JB3 615 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 ERVK-6Q9BXR3 956 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 RUVBL1Q9Y265 456 aaKnown RBP6.91□□□□□ -1.3
RAB5B-201ENST00000360299 MAN1A2O60476 641 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 SLC6A2P23975 617 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 ACVRL1P37023 503 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 SSR2P43308 183 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 CLCN4P51793 760 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 WDR4P57081 412 aaKnown RBP6.91□□□□□ -1.3
RAB5B-201ENST00000360299 GPX6P59796 221 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 MGAT3Q09327 533 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 NDUFA9Q16795 377 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 TIGD2Q4W5G0 525 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 FAM171BQ6P995 826 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 SCIMPQ6UWF3 145 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 LDB1Q86U70 411 aaPredicted RBP6.91□□□□□ -1.3
RAB5B-201ENST00000360299 TMEM25Q86YD3 366 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 MFSD6LQ8IWD5 586 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 PRSS58Q8IYP2 241 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 C8orf59Q8N0T1 100 aaPredicted RBP6.91□□□□□ -1.3
RAB5B-201ENST00000360299 FITM2Q8N6M3 262 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 TTLQ8NG68 377 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 UTP15Q8TED0 518 aaKnown RBP6.91□□□□□ -1.3
RAB5B-201ENST00000360299 TEFMQ96QE5 360 aaKnown RBP6.91□□□□□ -1.3
RAB5B-201ENST00000360299 MYADMQ96S97 322 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 OSBPL11Q9BXB4 747 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 EXD2Q9NVH0 621 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 TRPS1Q9UHF7 1281 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 CDH22Q9UJ99 828 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 TRBC1P01850 177 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 IL6P05231 212 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 HSPA7P48741 367 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 NOVA1P51513 510 aaKnown RBP6.91□□□□□ -1.3
RAB5B-201ENST00000360299 COPZ1P61923 177 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 DPYSQ14117 519 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 ZBTB6Q15916 424 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 XKR4Q5GH76 650 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 PITRM1Q5JRX3 1037 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 FAM92BQ6ZTR7 304 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 NPAS3Q8IXF0 933 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 RTP4Q96DX8 246 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 PRR11Q96HE9 360 aaPredicted RBP6.91□□□□□ -1.3
RAB5B-201ENST00000360299 RANBP9Q96S59 729 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 SYT11Q9BT88 431 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 C1orf50Q9BV19 199 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 ARRDC1-AS1Q9H2J1 176 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 ADGRE2Q9UHX3 823 aa6.91□□□□□ -1.3
RAB5B-201ENST00000360299 POLR3HQ9Y535 204 aaPredicted RBP6.91□□□□□ -1.3
RAB5B-201ENST00000360299 PHIPQ8WWQ0 1821 aa6.9□□□□□ -1.3
RAB5B-201ENST00000360299 UPK3BL1B0FP48 263 aa6.9□□□□□ -1.3
RAB5B-201ENST00000360299 UPK3BL2E5RIL1 263 aa6.9□□□□□ -1.3
RAB5B-201ENST00000360299 AP2A2O94973 939 aa6.9□□□□□ -1.3
RAB5B-201ENST00000360299 NR2F1P10589 423 aa6.9□□□□□ -1.3
RAB5B-201ENST00000360299 EPORP19235 508 aa6.9□□□□□ -1.3
RAB5B-201ENST00000360299 SLC16A1P53985 500 aa6.9□□□□□ -1.3
RAB5B-201ENST00000360299 CHIT1Q13231 466 aa6.9□□□□□ -1.3
RAB5B-201ENST00000360299 TIMM50Q3ZCQ8 353 aa6.9□□□□□ -1.3
RAB5B-201ENST00000360299 DEPDC1Q5TB30 811 aa6.9□□□□□ -1.3
RAB5B-201ENST00000360299 IL23RQ5VWK5 629 aa6.9□□□□□ -1.3
RAB5B-201ENST00000360299 TMPRSS11BQ86T26 416 aa6.9□□□□□ -1.3
RAB5B-201ENST00000360299 AMZ2Q86W34 360 aa6.9□□□□□ -1.3
RAB5B-201ENST00000360299 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.9□□□□□ -1.36e-7■■■■■ 139.2
RAB5B-201ENST00000360299 OR13C4Q8NGS5 318 aa6.9□□□□□ -1.3
RAB5B-201ENST00000360299 FBXO30Q8TB52 745 aa6.9□□□□□ -1.3
RAB5B-201ENST00000360299 JPH3Q8WXH2 748 aaPredicted RBP6.9□□□□□ -1.3
RAB5B-201ENST00000360299 SLC22A18Q96BI1 424 aa6.9□□□□□ -1.3
RAB5B-201ENST00000360299 NUS1Q96E22 293 aa6.9□□□□□ -1.3
RAB5B-201ENST00000360299 IMP4Q96G21 291 aaKnown RBP6.9□□□□□ -1.3
RAB5B-201ENST00000360299 MARK4Q96L34 752 aa6.9□□□□□ -1.3
RAB5B-201ENST00000360299 Q96MT0 163 aa6.9□□□□□ -1.3
RAB5B-201ENST00000360299 EFCAB11Q9BUY7 163 aa6.9□□□□□ -1.3
RAB5B-201ENST00000360299 TTLL2Q9BWV7 592 aa6.9□□□□□ -1.3
RAB5B-201ENST00000360299 C1orf109Q9NX04 203 aa6.9□□□□□ -1.3
RAB5B-201ENST00000360299 ALKBH4Q9NXW9 302 aa6.9□□□□□ -1.3
RAB5B-201ENST00000360299 ATP6V1HQ9UI12 483 aa6.9□□□□□ -1.3
RAB5B-201ENST00000360299 ARL5AQ9Y689 179 aa6.9□□□□□ -1.3
RAB5B-201ENST00000360299 SDHBP21912 280 aa6.9□□□□□ -1.3
RAB5B-201ENST00000360299 PTDSS1P48651 473 aaKnown RBP6.9□□□□□ -1.3
RAB5B-201ENST00000360299 SUOXP51687 545 aa6.9□□□□□ -1.3
RAB5B-201ENST00000360299 LMAN2Q12907 356 aa6.9□□□□□ -1.3
RAB5B-201ENST00000360299 FGD3Q5JSP0 725 aa6.9□□□□□ -1.3
RAB5B-201ENST00000360299 KLHDC10Q6PID8 442 aa6.9□□□□□ -1.3
RAB5B-201ENST00000360299 ZNF605Q86T29 641 aa6.9□□□□□ -1.3
RAB5B-201ENST00000360299 DSELQ8IZU8 1212 aa6.9□□□□□ -1.3
RAB5B-201ENST00000360299 CAMKK1Q8N5S9 505 aa6.9□□□□□ -1.3
RAB5B-201ENST00000360299 RBM15BQ8NDT2 890 aaKnown RBP6.9□□□□□ -1.3
RAB5B-201ENST00000360299 GPR156Q8NFN8 814 aa6.9□□□□□ -1.3
RAB5B-201ENST00000360299 NCSTNQ92542 709 aa6.9□□□□□ -1.3
RAB5B-201ENST00000360299 RORBQ92753 470 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms